Basic Information

Gene Symbol
SNAPC4_1
Assembly
GCA_947086405.1
Location
OX352269.1:15815675-15818041[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 3.6e-09 3.2e-06 27.6 0.1 1 44 265 310 265 312 0.93
2 4 1e-05 0.0095 16.5 0.4 2 45 319 366 318 367 0.93
3 4 1.3e-09 1.2e-06 29.0 0.0 1 41 371 411 371 415 0.95
4 4 1e-06 0.00094 19.7 0.0 4 45 427 471 426 472 0.95

Sequence Information

Coding Sequence
ATGGATCGCATTTCCGACAGTGATGATGAGGAAGCCCAAATTGCCAATTTGAGGCGACTCACAGCTGTTATAGAAGCAGAAGAGGTCCAACCGTCTACAAGTGGGACCTGCTCACAGAATTCTTTCCCGGAAAATCTCTGCAGCACCACTTCAAAAGTTCAAGAGGATTTCTTAAACGTACAAAATGCTCTAAGTTTAAATATATTGACCGATGAAAAGATGCAAAAACTTGAGAGTTTACTAAATTTAAGATTGAGCGAGTGTCGAGAAAAGCTGACAAATGAGCAAAGCTCTCCCGGCACGTCCACGGACAACACTGATAAGAACTTCAAGTATATTAACTGTGGCAGGCCGTACTTCAAAGGCCCTGACAATTTTCCAGCTCCTGACAATGAGGACACTATACTCATGGAAAAGTCTCATATGTACGATTTCTCTACCATAACATCCATGCCAGGATGGACTGTAAAGGATAAGATTGAATTTATTACGACAATCGTCAAAATGTCTATTGATATAAAAAAGAAACAATTGAACTCAAAAATATCACAGTTACAAAGAGAATCTAAAAATAAAAAAGGAAAGCGTGACAAGACTAATAACAGTCTACGAGAGCACATAGCAGAAATCAGAAAAGAAATTTATGGTCTTGATAAAAAGTTATTAACTGATTTGGCTTTGCCATTGGATGAGGAGTATGACTGGGATATGGTGGCCAAAAAGAACAACTATAGGCACAATGCTCAAGAGTATAGGGCTCTTTGGAAGCTATTTTTACATCCATCTATAAATAAAAATAGTTGGAGTAATACTGAGCATGAGAATTTGCAAAGAATAGCACTTGCGAATGAGTTGCAAGATTGGGACAAGATTGCTGATCAACTCGGTACAGGAAGGACTGCTTATCAATGTTTTGTTTACTTCCGCACCAATATTAGCAATACTTCCACTGGGCAAAAATGGTCTAAGCACGAGGAAGGTTATCTCAAAAGATTAATTGAATACTACAGAGAAGATGACCACATACCTTGGGGTAAGGTATCATTCTGCATGAAAAACAGAACTAAAGTTCAAATTTACAATAAATACCTTCGGCTCATGGAGCAAAGAAAGGGCAGGTTTTTGCCTGAAGAAGATGCAGTGATTCTCACTTGTGTCAAGAAATTTGGCCCAAACTTTAGAAGGGTGATGAAATATCTGCCTAGCCGTTCTATGGCTCAATTGCGTGCAAGACATAATGTGCTATCTACTGGAAGTGGGACGAAGACTTCTATTGTATGGACTGCAGATGAAGATAAGAAACTGATCCAATTTATGGCAAATCAGGATAGCACATTGAAGAACTACTCTAGTTTAACCAAATATTTCCCAGGAAAAGACAGGGCTCATATAAGAGCGAGGTACATTACTTTGGTAAAATGGATGAGAAAACATCCTAATATGGATATTTCTAAGGCTCCACGTCGAGGTGCACGTCGTCTGGGGCACGGTGTAGCATCACAAGACTTAAAGAATGCTGTAGAGAAGCTAAAGAATAGAATGCAATCAGTAGTTGAAAGCAAAAAATCTACAAAACTCACCGTTGACTCTCCCCATGAAGCTATAGATGCTGCTCTTATTGCTGCTATAATCAATGACATGAATAAAGCAGAGGAGGAAAAGAAATTAGTCACATGTGACACCGAACAAACAGTTGTGGAAGAATCTTGGGATGTTCCCAAAACTCCTCCAAATGTAGCCAACTTGGAAAAAACACTTATTTTATTAAAAGCAAAACTGGATAAAAGAAAGTTTCAGAATAGTCCTTTTGGTCAGATGTATCCAGAATTACTACAGGAGAGCCAAGAAAGGAGTGTTCTAGTCAAGTCTTATTCGAAAAATGCAACAGTGGATGTGTTGAATATTGAAAAACCAGACATATGGGGAAATAAAACCTTGAGTACAACAGAATATGTGTTCCCTCCGAACTATTCTACTATCACTGCATGCAGAAAGCTAATGGCTTATGCCAGCACTATACCTGATAACACACAGCCAATGCAGTTGAGTTTACTAGCAAGGAGAAATGTTCTTTTGAAAGAGCAACTTGATCTTTTGAGAGACCGCTTTAATGTTTTATTCTTATGGCCGATATTACTTTCTAATGTCAGTCCTTATACAACACCAGTTCCGCGAGGTCTGAAAATCAAACCACCACCAGTGAAGACATTGATACTGTCTGTAGATCCTGGAATAGCTATTCCCAATGTTGGAACACATATTGTTAATGAAAATATTGATTTAACAGAGTCCAATAAAGAAGAGAAAGATATAACTGTAAAAGATGTGTATATTGGTAATGATGATTATATGTTTATGAAGCATTGA
Protein Sequence
MDRISDSDDEEAQIANLRRLTAVIEAEEVQPSTSGTCSQNSFPENLCSTTSKVQEDFLNVQNALSLNILTDEKMQKLESLLNLRLSECREKLTNEQSSPGTSTDNTDKNFKYINCGRPYFKGPDNFPAPDNEDTILMEKSHMYDFSTITSMPGWTVKDKIEFITTIVKMSIDIKKKQLNSKISQLQRESKNKKGKRDKTNNSLREHIAEIRKEIYGLDKKLLTDLALPLDEEYDWDMVAKKNNYRHNAQEYRALWKLFLHPSINKNSWSNTEHENLQRIALANELQDWDKIADQLGTGRTAYQCFVYFRTNISNTSTGQKWSKHEEGYLKRLIEYYREDDHIPWGKVSFCMKNRTKVQIYNKYLRLMEQRKGRFLPEEDAVILTCVKKFGPNFRRVMKYLPSRSMAQLRARHNVLSTGSGTKTSIVWTADEDKKLIQFMANQDSTLKNYSSLTKYFPGKDRAHIRARYITLVKWMRKHPNMDISKAPRRGARRLGHGVASQDLKNAVEKLKNRMQSVVESKKSTKLTVDSPHEAIDAALIAAIINDMNKAEEEKKLVTCDTEQTVVEESWDVPKTPPNVANLEKTLILLKAKLDKRKFQNSPFGQMYPELLQESQERSVLVKSYSKNATVDVLNIEKPDIWGNKTLSTTEYVFPPNYSTITACRKLMAYASTIPDNTQPMQLSLLARRNVLLKEQLDLLRDRFNVLFLWPILLSNVSPYTTPVPRGLKIKPPPVKTLILSVDPGIAIPNVGTHIVNENIDLTESNKEEKDITVKDVYIGNDDYMFMKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-