Basic Information

Gene Symbol
-
Assembly
GCA_947086405.1
Location
OX352279.1:228688-230309[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.0011 2.5 9.0 0.0 48 86 98 135 95 136 0.89
2 4 0.25 5.6e+02 1.5 0.1 52 83 196 226 189 230 0.69
3 4 0.0031 7 7.6 0.1 48 83 283 317 255 319 0.80
4 4 0.0065 15 6.5 0.0 49 83 386 419 365 422 0.87

Sequence Information

Coding Sequence
ATGGATGCTAACACCACCCAAAACCCAGGCTACTGGTTCGTTCTTCGAGAAGACCAAGGCAATGTTATATTCAGCAGCAATAACATCACTAACTTACAAAATACCCAAATTACAGCAGTACCAGATGCGCGGTACGTCACACAGCCAGTCCCCGACCGAGCCTATATCCAAGAAGAACTGTCTGATGGCAGCGACAAGGGAGTTGGCAAGAAACAGAAGGGGAAGGAAGAGGACAACTTCTGGGACAGAACTAAAGTCAAGACATTACTTACTCTGTGCTTGGAGAACAGAAATGTTCCCAAGGAAACTTTGTGGAACGAGATCAGTGGCATCCTAGGAGTGACTCCTGAAGAATGCAGCAACAAATACAGACATCTCAGGAGGACATATCTACGGTTACTGAAAAAGAAAAGGTTAGGGAAGCATGTGAAATGGGTTCACTATAGCACTTGTGAAGAGGTTTTTATGGACTTGAAGGCTCTGCCTTCGTCTGTGCTGGAGCCATGGGAGGACACTAAAGTGAGAAGGCTTCTTAGCCTTTACATTGACAACCTGCCCAAATTCCGCAACCCAGGATACTTACAGAAAGACATTTGGAGAGATATTGCTTCTCAACTGGCCACGACTGGATACAACTGCTATCACAAGTTTAAAAACTTGCGGAGGACTTACTGGAATGGGCTGAATCGCAGTCGTGAGACTGGCAAGGTGACAAAATGGCCGTACCACCATTATTTTGAGAGAATATACTACAACTACAAACCATGTGCTAGACCCTGGGATCGGCACAAAATCAAACAGCTTCTGGAAACATATGCTCAAATAGCACACAAGTTCAAAAATCCAAAGCTGCAAAAGAAGGAACTTTGGAAAGAAATAGCAAAGAAAGTAGGCGAGAACCCCACGGGATGTGATAAGAAATTCCGAAACTTGAAACAGACATATGTGAGGTTGAAAATGAAAGCCAACTGCGGGCGTTTAACTACAAAGTGGAGGTATTACAAGGAATTTGATGCAATCTACAGTAACACAACAAGATACATTGATATTGATGGAGTACAGAAGGTAGTGTACAGACCATGTCAGGAAGAAGACTACAAAAAGGAGCTTTTAACATTTTATTTAGAAAACAAACACAAGTTCCGAGATCCACTGGTAAAGAACAGAACTTTGTGGAAAATGATTGCTCCTAAATTGGGCTTAACTGCTGAGGAATGCGACAAACATTTTCGCAATCTCAAGCAGACGTACATCAGACTAGCATGGAAGAAAAAGCAGACTGGGAAGTGCAACAAGTGGCCATATTATTCTCTATTTGAGAGGATATTTGATGAGTCCGAGATACTGATCTGCGATGGTAATCCTAAGACTGACATAGAGGAGATCATGAAGAGCGAGATCCGGAGAGTAGTGGAGGATGTACACGAGAGAAGAGACAATGACAGGAAGTTTGAGAGGCTGGTGCAAGTGGCAGAGGAATCCAACTCCATCCAACGTGAGAGGAACATAATTCTTCAAGCTCTATTAAATACAAGAAAATGA
Protein Sequence
MDANTTQNPGYWFVLREDQGNVIFSSNNITNLQNTQITAVPDARYVTQPVPDRAYIQEELSDGSDKGVGKKQKGKEEDNFWDRTKVKTLLTLCLENRNVPKETLWNEISGILGVTPEECSNKYRHLRRTYLRLLKKKRLGKHVKWVHYSTCEEVFMDLKALPSSVLEPWEDTKVRRLLSLYIDNLPKFRNPGYLQKDIWRDIASQLATTGYNCYHKFKNLRRTYWNGLNRSRETGKVTKWPYHHYFERIYYNYKPCARPWDRHKIKQLLETYAQIAHKFKNPKLQKKELWKEIAKKVGENPTGCDKKFRNLKQTYVRLKMKANCGRLTTKWRYYKEFDAIYSNTTRYIDIDGVQKVVYRPCQEEDYKKELLTFYLENKHKFRDPLVKNRTLWKMIAPKLGLTAEECDKHFRNLKQTYIRLAWKKKQTGKCNKWPYYSLFERIFDESEILICDGNPKTDIEEIMKSEIRRVVEDVHERRDNDRKFERLVQVAEESNSIQRERNIILQALLNTRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00994155;
90% Identity
iTF_00994155;
80% Identity
iTF_00674249;