Basic Information

Gene Symbol
cnc_1
Assembly
GCA_947086405.1
Location
OX352285.1:2546397-2552515[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 2.5e-13 3e-10 40.4 6.1 3 63 136 196 134 202 0.85
2 6 3 3.6e+03 -1.5 0.0 42 59 218 235 213 239 0.75
3 6 2.4 2.8e+03 -1.2 0.0 41 59 312 330 296 334 0.79
4 6 2.4 2.8e+03 -1.2 0.0 41 59 407 425 391 429 0.79
5 6 2.5 2.9e+03 -1.2 0.0 41 59 502 520 486 523 0.79
6 6 3.2 3.7e+03 -1.6 0.0 42 59 539 556 534 559 0.74

Sequence Information

Coding Sequence
ATGCCTACGCGAAGAGTGACAAAAGAGATTTACAGCGCGAATGTGGTAGGAAATGCAGCTAGAGGTCGTCCTAGGAGGACGTTAAAGGATCAAATTGATGACGTCCTCAAAAAGGCTGGGGTCCGCAGTGAGAAGAATAAAATGAGATGCCTACGCCCAACAGCGGACATTAGCGGGCTAACACGGTACGTGGTATGTGTGTTGACAGTGCGGCGACTGACAGACGGGAGCATGTCGGATGGCGGGTCGTCGGCCACCAGCAGCGGGCAGCATCTGTCGCGAGACGAGAAGCGGGCCAAGGCACTCGGAATCCCACTTGAAGTGCACGACATCATCAACCTGCCGATGGACGAGTTCAACGAGAGGCTCTCCAAGCACGACCTGAGCGAGGCGCAGTTGTCGCTTATCCGGGACATACGCCGTCGCGGGAAGAACAAGGTGGCCGCACAGAACTGCCGCAAGCGCAAGCTGGACCAGATCACGTCGCTGGCGGACGAGGTGCGCACCGTGCGCGACCGCAAGCACCGCACGCAGCGCGACCACCACACGCTCACGGCCGAGCGGCAGCGCGTCAAGGAGCGCTTCGCCGCGCTCTACAGGCACGTGTTCCAGGCACGTGTTCCAGGTCAGTACTCGCCGCGGAGCGACCGCCACACGCTCACGGCCGAGCGGCAGCGCGTCAAGGAGCGCTTCGCCGCGCTCTACAGGCACGTGTTCCAGGTCAGTACTCGCCGCGGAGCGACCGCCACACGCTCACGGCCGAGCGGCAGCGCGTCAAGGAGCGCTTCGCCGCGCTCTACAGGCACGTGTTCCAGGTCAGTACTCGCCGCGGAGCGACCGCCACACGCTCACGGCCGAGCGGCAGCGCGTCAAGGAGCGCTTCGCCGCGCTCTACAGGCACGTGTTCCAGGTCAGTACTCGCCGCGGAGCGACCGCCACACGCTCACGGCCGAGCGGCAGCGCGTCAAGGAGCGCTTCGCCGCGCTCTACAGGCACGTGTTCCAGGTCAGTACTCGCCGCGGAGCGACCGCCACACGCTCACGGCCGAGCGGCAGCGCGTCAAGGAGCGCTTCGCCGCGCTCTACAGGCACGTGTTCCAGGTCAGTACTCGCCGCGGAGCGACCGCCACACGCTCACGGCCGAGCGGCAGCGCGTCAAGGAGCGCTTCGCCGCGCTCTACAGGCACGTGTTCCAGGTCAGTACTCGCCGCGGAGCGACCGCCACACGCTCACGGCCGAGCGGCAGCGCGTCAAGGAGCGCTTCGCCGCGCTCTACAGGCACGTGTTCCAGGTCAGTACTCGCCGCGGAGCGACCGCCACACGCTCACGGCCGAGCGGCAGCGCGTCAAGGAGCGCTTCGCCGCGCTCTACAGGCACGTGTTCCAGGTCAGTACTCGCCGCGGAGCGACCGCCACACGCTCACGGCCGAGCGGCAGCGCGTCAAGGAGCGCTTCGCCGCGCTCTACAGGCACGTGTTCCAGGTCAGTACTCGCCGCGGAGCGACCGCCACACGCTCACGGCCGAGCGGCAGCGCGTCAAGGAGCGCTTCGCCGCGCTCTACAGGCACGTGTTCCAGGCACGTGTTCCAGGTCAGTACTCGCCGCGGAGCGACCGCCACACGCTCACGGCCGAGCGGCAGCGCGTCAAGGAGCGCTTCGCCGCGCTCTACAGGCACGTGTTCCAGAACCTCCGCGACCCCGAGGGCAGGCCGCTGTCCTCGAACCAGTTCTCGCTGCAGCAGGCCGCCGACGGCAACGTGGTTCTCGTCCCCAAGATGCCCCAGCACCCTGatcacatgaaCCGCAGCTCCGACGACGAAATGGACAGGAAGGCGAAGAACTACGAGCAGTGA
Protein Sequence
MPTRRVTKEIYSANVVGNAARGRPRRTLKDQIDDVLKKAGVRSEKNKMRCLRPTADISGLTRYVVCVLTVRRLTDGSMSDGGSSATSSGQHLSRDEKRAKALGIPLEVHDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKHRTQRDHHTLTAERQRVKERFAALYRHVFQARVPGQYSPRSDRHTLTAERQRVKERFAALYRHVFQVSTRRGATATRSRPSGSASRSASPRSTGTCSRSVLAAERPPHAHGRAAARQGALRRALQARVPGQYSPRSDRHTLTAERQRVKERFAALYRHVFQVSTRRGATATRSRPSGSASRSASPRSTGTCSRSVLAAERPPHAHGRAAARQGALRRALQARVPGQYSPRSDRHTLTAERQRVKERFAALYRHVFQVSTRRGATATRSRPSGSASRSASPRSTGTCSRSVLAAERPPHAHGRAAARQGALRRALQARVPGQYSPRSDRHTLTAERQRVKERFAALYRHVFQARVPGQYSPRSDRHTLTAERQRVKERFAALYRHVFQNLRDPEGRPLSSNQFSLQQAADGNVVLVPKMPQHPDHMNRSSDDEMDRKAKNYEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-