Etag007204.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990101.1:2729226-2746080[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.47 28 5.5 4.3 1 23 223 245 223 245 0.98 2 12 3.2 1.9e+02 2.9 1.3 1 17 306 322 306 327 0.89 3 12 0.0072 0.43 11.2 0.2 2 23 345 367 345 367 0.96 4 12 0.069 4.1 8.1 3.7 3 23 406 426 404 427 0.95 5 12 5.9 3.5e+02 2.0 3.5 3 23 853 874 852 874 0.95 6 12 0.69 41 4.9 0.5 2 15 880 893 880 896 0.83 7 12 0.41 24 5.7 0.3 2 23 993 1014 993 1014 0.94 8 12 0.29 17 6.1 2.4 2 23 1030 1051 1029 1051 0.96 9 12 2.2e-06 0.00013 22.2 2.6 1 23 1057 1079 1057 1079 0.98 10 12 0.0021 0.12 12.9 4.3 2 23 1085 1106 1084 1106 0.97 11 12 0.00014 0.0085 16.5 0.2 2 23 1113 1135 1112 1135 0.95 12 12 0.00016 0.0095 16.4 1.6 3 23 1174 1195 1173 1195 0.96
Sequence Information
- Coding Sequence
- ATGTTGGAAAATAGTCGGAAACGAGCAAGGAAGTCGAAGCTAGAGGTGCGGGAAGGCATGGAATTTGAAGACACTAGTGTCTTGTATATGCAGGTAAAAAAAGAACTAGAAGAAAAAACAAATATTGACAAGCCAACCACAACGGTTGGTGATGTAGCACCAAACCAAACAGATTCATTTCATGGTATAGCTTCAACTACCGCCATAAGCCACAGACCAAAAATGGAGTTCTCCGTGAAGGTAGAAGTTGAAGAATGTGACATTGAAGACTTGGACACGGGACAGACAGGAAAGGATGACGGAGGAAGGAAGAGAAAGCATGATGAAGAAGAAACCTCAAAGAATGTTACTTCAGGGGTTGTCACTGTAGACACCTCTACGTCTAGCGTGTTTGTGCCAAGCAATCCAAGCAATACCTTATCAAAAAGTGACACGGAGACTAAGAAAGAATTCAAAGAATATGTCACTAACAAACAGATGATATTGAGGTTGGCAGAACGACTGAAAAAATCTCTGAACATCGCAGACAAAGTTTTAGCAATTGAAGCAAGGAACTACGCAGGGAGAGTCCTTGAACCGCAGGATGAGGGGATGTACCAACGTGTGCTCCGAGAATGGAATTCTTGGTACGACAACCACTCGGGAGTTAGGCAGCCGCCTCTGCTATACAAATGCTGTGTGTGCGGTGCGTCATACTGGCATTTACACGACTTCAAGGAACATGTAATCACACACAGACACATGAAGAACTATAACCAGTTCAAACTGACAATTGAGACCGAGAACGATGAATGTTACATCGTATATTACATGATTCAGTTATCAAAAGAGAATTTAAGGTTCCCGAAAGGAAACTGCTTCAAATGTCACAACTCCGCGGCAAGTCACATCTTTGCTAAAAATGACCGCAAGAATTACAAATGTGTAGCGTGTCAGGTCACCTTCTCCACTTGCACGCAGCTGGTTTTCCACGAGCAGCGATGTGCTGTGTTCCGGAACAAATATCTAACAGGCGACCCGACGGAATACGAGCAGTGTCGGATATGCGAGGCTGGCTTTTATACCAAACCATCATTGATGGAACACTTGAGGTTATTCCACACTGTCCGGTCCGACGTGGTTATAGCCTGGGAGCTTCACAGCTGCAAGGCGTGTACCCAGTCGTTTGTTGCATCGGAATGGCACGTATGCCCGAAGCGGAGCAACAACTACGGGTGCAATTATTGCGGGCGCAGTCTCCAGAGGAAGGTGCATAAGGAGGTGCATGTAAAGAGACACCATTACCCAGTCAAGTGCAGGATTTGCGGGAAGCAGCTGCCCGCCGCGTGTGTGGAGCCCTCGCACTTATTGCAACACACTGAGAAGTTTGCGCTCTTGTATAAATGCTCGGAATGCTCTGACGGATGCTATTATCCCGACGAGGAATCTATAGTGCATCATACGGAAATCGTGCACAAGAGAAAGTTTGAGAGGAAATTCAAGTATTTGGAAATGGTAATATTACCAAAACAATGTCTGGACATCAAGAGGGAAGCACCACCATTAACCAGTAAACCCTCTGATGAAATAAAAAAAGTATCTATCACGAAGGTGACATCAGGCTCAGTAACCAGTCCATTGGTCCCATCGCTTAAGGACGAGCCGGGAATTAAGGAGAAAATGAGCTTGCTAGTCAAAGAGCTTACCGAACCCCTCCCTTACGTGAAACAAGAAGAGGTCAAGGATCGCGAGTCAATCCAGAATGTGCAGTATCACACGGACGTGGTGATCAAAGATGAGCCGATGGATGACACGGTCCAGACGGAGAGTGTTCCGGAACCTGTGGATATCAAAACTGAAAAGGATGTTCACGGATCGGATATCGATGTGTTGAATATTAATAGTTTGAATACTCTTCTCAACATCAAGCCGAAAACCGAGCCGTCTGACGCCATGGACGATGAAGAACCGGACGAGGGCTCCGAGGTGGTCGTGGTGGAGAACGGGAATGACGTCATCTCCATTACCTCCGCAGAGGACAGCTACGACAGCGCCAACTCGCACTCAGACAAGAAGTATACGGGGAAGAAGAGGAAACGGCTACAGCGACACGTGTGCAGTTGCGGGTTCGTGGGCATCCGCCGCAAGATGGCGCTGCACAGGCAGCGGTGCCTGGCCGTGCTCGCGCTGCGCACGCTGCGGAGGCCGAGGCGGGCGAGGGCCGTCTCTGATGACATTTCAAAAACCTCCAGTGATAGTCAGAAGACCACGACAATCAAACAGCCAGCACCGAAGAAGACAGCTGATCCGGCCGAGAGTACTTCAAGAGATGACAGCGATAACGAGGACGCTGGAGAAAAAGGTGACGGAGAAGAAGTCGGGGAAGATGGAGAAAACGCCGCTGGAAAGATGCTGAACGAGGCGCCGTCGGACGGAAATAAGCCGCAGAAAAAGAGACGTGCAGGTGTGATGCACACCGGCAAGTGCGGCTTCCGAGCGCAGCACACGGAGATGTGGCGCCACCGCGCGTCCTGCGCCGAGTGCGCGCCGGGCACGTTCCTGCACCGCCCCGCCGCCTGCACCAAGTGCGACAACACCTACGACACCATACACCGTTACGTCAAGCACTTGCACAAGGTGCACGGGTACGAACGCAACACGTGTCCGTTCTGCTCGAAGACGTTCGACACGCTGACGCGTCTGGAGAGCGACGTGGTCTCGCACGTGCGGCGGCTGTTCGTCAAGACCAACGCGCTGCTGGGCGGCAAGGGCACCGCCTGCACCCAGTGCCACGCCGCCGTCCACGCCAGAGACTTCTTCACGCACTGGGAGTCTCATATGATGAGCCTGATGCGTGCGAAGGAAGACGACGTAGAGCCAGCGGCGCTGGTGATCGACGAAGCAGCGGAAGGGCTCTACAGCTCCGACACCATTAAGCGGGCCGTGGCCAGCCTGCAGTCCTCGGAGGTGTCGCGGTTAGGGCGCTCGAAGCAGCGTCAGTGTGTGGTGTGCGAGCGCGAGTTCTCGCGCATCAATGACAGCAAGCGTCACCTGATAGAGCATCTACTGGCGGACGCGTACACCAAGAAACCCTACTACAGGGCGTTGAGATGCCAGATCTGTGCTAAGCAGTTCCTCAAGGCGGACAAGTACAAACACCACTTGCGCGAACACGCGTCTCTGCCGCTCTACCAGTGCGAGCTCTGTTCCAAGTCTTTCAGCGATTCCAGCAACTTCAGCAAGCATAAGAAGGTGCACAACCTGGCAACACTCTCCTGCTCGCTATGCAACAAGAAGTTCCACAATAAAAATTATTGGATGACGCATATGAAGATGCACGACACGACGAAGCCCACGGTGTGCGAGATATGCCAGCGCGCGTTCTACGCGCAGTCCGCCTACAAGAAGCATATGCGCGCCGCGCACGAGAAGCGGCGCTCGCGCGTGCGCTGCCTCGTGTGCCGCGACAGCTTCACGCGCCTCAGAGACAAGTGGGACCACATGTGGATCGTGCACAACGAGCGCAAATTCATAGCGGACTGTCAGCTGTGCCACCTGGCCTTCCGACGGTACGCCGACCTCAAACAACACATGCGCAACGACCACAAGCGCGAAATCGTGCGCACAATGGAGGGCGCCATACGACTCGTGTGTCGCAGCAATGTCGACCAGTGTGAATGCTGCCCTAATATCGAGAATTCAGTGACCGATCGGGTGCGCCGGCTCGGGATTAGGCCCCCGAACGACGCGCCCACGAGGACCAAGAGGAGAGGTGACACCGTGGTAGATGGTGCGTCAGGCGAGTGCGCCGAGCCCGAGGAGGCGGCGGAGGCGCTCGACGTGGAGGCGGACAGCGACAGCGCGCACAGCCTGCTGCTGGTGTGCGAAGAGGACACCGAGGAGCAACTGGACGTGTGA
- Protein Sequence
- MLENSRKRARKSKLEVREGMEFEDTSVLYMQVKKELEEKTNIDKPTTTVGDVAPNQTDSFHGIASTTAISHRPKMEFSVKVEVEECDIEDLDTGQTGKDDGGRKRKHDEEETSKNVTSGVVTVDTSTSSVFVPSNPSNTLSKSDTETKKEFKEYVTNKQMILRLAERLKKSLNIADKVLAIEARNYAGRVLEPQDEGMYQRVLREWNSWYDNHSGVRQPPLLYKCCVCGASYWHLHDFKEHVITHRHMKNYNQFKLTIETENDECYIVYYMIQLSKENLRFPKGNCFKCHNSAASHIFAKNDRKNYKCVACQVTFSTCTQLVFHEQRCAVFRNKYLTGDPTEYEQCRICEAGFYTKPSLMEHLRLFHTVRSDVVIAWELHSCKACTQSFVASEWHVCPKRSNNYGCNYCGRSLQRKVHKEVHVKRHHYPVKCRICGKQLPAACVEPSHLLQHTEKFALLYKCSECSDGCYYPDEESIVHHTEIVHKRKFERKFKYLEMVILPKQCLDIKREAPPLTSKPSDEIKKVSITKVTSGSVTSPLVPSLKDEPGIKEKMSLLVKELTEPLPYVKQEEVKDRESIQNVQYHTDVVIKDEPMDDTVQTESVPEPVDIKTEKDVHGSDIDVLNINSLNTLLNIKPKTEPSDAMDDEEPDEGSEVVVVENGNDVISITSAEDSYDSANSHSDKKYTGKKRKRLQRHVCSCGFVGIRRKMALHRQRCLAVLALRTLRRPRRARAVSDDISKTSSDSQKTTTIKQPAPKKTADPAESTSRDDSDNEDAGEKGDGEEVGEDGENAAGKMLNEAPSDGNKPQKKRRAGVMHTGKCGFRAQHTEMWRHRASCAECAPGTFLHRPAACTKCDNTYDTIHRYVKHLHKVHGYERNTCPFCSKTFDTLTRLESDVVSHVRRLFVKTNALLGGKGTACTQCHAAVHARDFFTHWESHMMSLMRAKEDDVEPAALVIDEAAEGLYSSDTIKRAVASLQSSEVSRLGRSKQRQCVVCEREFSRINDSKRHLIEHLLADAYTKKPYYRALRCQICAKQFLKADKYKHHLREHASLPLYQCELCSKSFSDSSNFSKHKKVHNLATLSCSLCNKKFHNKNYWMTHMKMHDTTKPTVCEICQRAFYAQSAYKKHMRAAHEKRRSRVRCLVCRDSFTRLRDKWDHMWIVHNERKFIADCQLCHLAFRRYADLKQHMRNDHKREIVRTMEGAIRLVCRSNVDQCECCPNIENSVTDRVRRLGIRPPNDAPTRTKRRGDTVVDGASGECAEPEEAAEALDVEADSDSAHSLLLVCEEDTEEQLDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -