Etag009311.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990074.1:13585292-13592479[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.7 2.2e+02 2.6 1.1 3 22 460 479 458 482 0.90 2 13 7.2 4.3e+02 1.7 2.6 2 19 504 521 503 527 0.91 3 13 0.00063 0.037 14.5 5.3 1 23 541 564 541 564 0.97 4 13 0.012 0.69 10.5 0.6 1 23 569 593 569 593 0.92 5 13 1 62 4.4 0.2 2 23 614 638 613 638 0.89 6 13 0.00011 0.0066 16.9 0.6 2 21 644 663 643 664 0.96 7 13 2.4e-05 0.0014 19.0 0.3 1 23 720 741 720 741 0.97 8 13 1e-06 6.1e-05 23.3 0.3 1 23 747 770 747 770 0.96 9 13 2.5 1.5e+02 3.2 2.0 2 19 787 804 787 807 0.92 10 13 0.04 2.4 8.8 0.0 2 23 814 837 813 837 0.95 11 13 0.0029 0.17 12.4 0.3 1 20 844 863 844 864 0.95 12 13 0.088 5.2 7.8 5.8 1 22 872 893 872 895 0.90 13 13 1 60 4.4 1.5 1 23 901 924 901 924 0.89
Sequence Information
- Coding Sequence
- ATGCTGTCGCCGCGAGATGACGACGAAGATGACAACCACCTGTGCATCAAATGCAACGCAACCATCGTCGGGCTCGATAACTACGTAAAGCATAGGAAAGAGAGATGTGGCAAAATTAAAAATGAAATCAAACCCGACCTACCTCCTATAGATCCTTTAGAACCTTCGTACAATCTAGGTGCCGATGTATTCTTCCAATCTCTGGAATTACAGAGCAGCGTCAAAAAATCTTCCCGACTCACTCCTCCGACCCCGATATCGAAAGTAAACGTTGAAAGGAAAAATGCTCTCGCTATCCCATCTACTTCCAGAGAAAATCCAAGGATGAGCCCTCTAGAAAGCAACTTGAGAGGAGAGGACTGGATTGGCGGTCATAGTTTGCGAATCGGATGCAGCGAAGATAATCAAACAAAACTCATCAACGCCGTAGCCAGCATAAGTGGTACCGTGAAAAAGGAAGTACAATCTGTATCGTATAGTATAGGAACCTATAATGATTACAAAGGTGATGACGATTCTGAAGAGTCTGATGACTCAGAGGAAGAAGACGAGGATGATCCTGGGCACTCTAGTAAGTGGAAGCCTCCTCCAAATTACACTGGTGGTAAATGGCGACCGGCTTCTCCTGAGAATGAAGAATGGGACATGCGTGAAGAACAGGAACATACTGGCGGAAAATGGAAGCCCTTAATTGTAACAGAGGGAAACGAGCGCGATGAAGACTATGACGCTCCTCCACCCAGCCATACTAGAGGAAAATGGGTACCAGGAGCACACGAAAAGACCCAAATAATGCAGACCACTATACAGACAAAGGGAGCCGTGCAGTACTGGTGCGGACCTTGCAACAGACGACTTGGCTCAAGAGCTATTTACGACAAACATTTACGCTCCAACTTACATAAACGTAAAGTTCTACCAGAGCAGGAATTGGAATTTTCAGGACACCTAGAACCAATGCGAAACGTTACAGATAAGAGAATAACGCGGCCCTCTTCCTTCCTAAATGACAGCATTTACGAACATCCTCAAAGGAAACGACAGAAAATATCGGAAACAGTTACAACAGAGAAAGTTGAGAAGAAAAAGAGGAAACGTAAGCCTGTCTTTGTTCAGTGTTCTGGTTGCAAGTCGCGGGTGAGGTTACATTTGATGGGGAAGCATCTGATATCCCATTACCATTTCAGAAAGGCTGCGAACACTCAAAGCAGCGTCTACCAGCAGTTAATTCTGGACAATATAGATGCAATCGTACACCAGTCTCCATTTCAGTGCAGCCCTTGCAAGTTTTACACTAACTGGTTCTCAAACTTCATGCAGCACTGGCTTTCTGAAGAACATGAAGAGAAAATGAAAACAATGGACGGTATTTATTGGTGTTCGTTCTGCAAATACGAATGCGAGACATCACAGGAAATGTTGGACCATATATCCAGTTCCGAACATAGCGAGGTGATCGCTGTGATCAATAGATCGATGCCCATAATAATTCGGAAGAAGACCATCTTACGGTGTGAGACTTGCTTAAAACAATTCAGATTCAATATGGAGATCAAGCAACATTGCAAGCAAACTGGCCACCAATTGGCACATACAGCTTCCGATAGCTATCAAGAACTCCACAAATGTCAGCATTGTGACCAGAAGTTTAAAACATCCTTGACCCTAGCAGCGCATCTCAAATCTAAACACAAGCAGAAAGCATTCTTCTGTCTTGTCTGTTCGTTGACGTTTGCCTCTTCAGATGACGCTAAAAAGCATCGCCAGACTTCAGAGCACAGGATCAAGAGAAAGGAAAATCAGAAGAAACGCGGTCTGCCTGTTAAGGACTGGACGAAAAAATGCCCTTACTGCACTGAGGAGCTAGTGCTTAAGAATTTGTTGGAGCTCAAGGAACATATTAAAAGAGTTCATCCAAATTTTAAAAAGAGGTGCACAAAGTGTGGGAAATCATTTGTATTTTCTCAAGAAGTGACCCGTCATATCAGGGAAAACGCTTGCCAGTTCCCAAACGAGACCAACTCGACTTCTTCACTTCTCTGGAACTGTAGCCAATGTCTCTTTACGACGGATTCGCAAGCGGAATGTTTCTTCCACGAAATCTTGCACACCCAACCGATCTCAGAAACCAGCAAATCCGGGACCGTAGTCGAGAAATACCCCTGCCCCGTCTGTCAGAAGACATTCAAGAAGCCATCGCTCCGTGCACATATAAGACAGCATACCTTCGAGAGACCCTTCATTTGTACTGTTTGCGGTGCCAACTTCACAAGACAGGGCAGCTTGACGAATCATATGAGGAACGAACATGGAAAGGATAAGGAGTCTAAGTCAGGTGATGAGACGAAGGAATTTGGAGAATGCCCGAAATGTAAGAAGAAACTAATGAGCAGAGTTTCGTACGAGCAACACTGCAAATCGTGCACTAAAGACGAGAAAAGCTGTCCGTATGACGAGTGCGCTTACGTAGGATCTACGCCAGAAAGTGTTATTAGACATCTTCGTACACACGGTGAACGCCTCAAGCTACATGTGTGCCCAATATGCCAATTTAAAACCGACCAGGCCAGAAACTTAAAGAGACATCTGGTTTGCCATAAAGGAATAAAGCCATATTGTTGTCCTCATTGTGAATTTACCTGCGGAAGTCTTGAAAATCTTCGAAAGCATGTGTTCGGTCGCCACACTGGACTTTATCTTTACCGATGCCAGTTATGCGAATATCAAACGAATATGGCAACAGAACTAAAAACACATTGTATCACGATCCATCCTGATTTTTATGATTTAAAAACTGCTTCCGAAGCCGTGAGAACTCATTTAATGAAGGACATGCAATCTAATTAA
- Protein Sequence
- MLSPRDDDEDDNHLCIKCNATIVGLDNYVKHRKERCGKIKNEIKPDLPPIDPLEPSYNLGADVFFQSLELQSSVKKSSRLTPPTPISKVNVERKNALAIPSTSRENPRMSPLESNLRGEDWIGGHSLRIGCSEDNQTKLINAVASISGTVKKEVQSVSYSIGTYNDYKGDDDSEESDDSEEEDEDDPGHSSKWKPPPNYTGGKWRPASPENEEWDMREEQEHTGGKWKPLIVTEGNERDEDYDAPPPSHTRGKWVPGAHEKTQIMQTTIQTKGAVQYWCGPCNRRLGSRAIYDKHLRSNLHKRKVLPEQELEFSGHLEPMRNVTDKRITRPSSFLNDSIYEHPQRKRQKISETVTTEKVEKKKRKRKPVFVQCSGCKSRVRLHLMGKHLISHYHFRKAANTQSSVYQQLILDNIDAIVHQSPFQCSPCKFYTNWFSNFMQHWLSEEHEEKMKTMDGIYWCSFCKYECETSQEMLDHISSSEHSEVIAVINRSMPIIIRKKTILRCETCLKQFRFNMEIKQHCKQTGHQLAHTASDSYQELHKCQHCDQKFKTSLTLAAHLKSKHKQKAFFCLVCSLTFASSDDAKKHRQTSEHRIKRKENQKKRGLPVKDWTKKCPYCTEELVLKNLLELKEHIKRVHPNFKKRCTKCGKSFVFSQEVTRHIRENACQFPNETNSTSSLLWNCSQCLFTTDSQAECFFHEILHTQPISETSKSGTVVEKYPCPVCQKTFKKPSLRAHIRQHTFERPFICTVCGANFTRQGSLTNHMRNEHGKDKESKSGDETKEFGECPKCKKKLMSRVSYEQHCKSCTKDEKSCPYDECAYVGSTPESVIRHLRTHGERLKLHVCPICQFKTDQARNLKRHLVCHKGIKPYCCPHCEFTCGSLENLRKHVFGRHTGLYLYRCQLCEYQTNMATELKTHCITIHPDFYDLKTASEAVRTHLMKDMQSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025662;
- 90% Identity
- -
- 80% Identity
- -