Etag011091.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990083.1:9878590-9886490[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0046 0.28 11.8 3.4 1 23 446 468 446 468 0.99 2 12 0.57 34 5.2 1.1 1 23 475 498 475 498 0.94 3 12 2.2 1.3e+02 3.4 2.9 1 23 502 524 502 524 0.93 4 12 0.51 30 5.4 1.1 1 15 529 543 529 548 0.80 5 12 0.13 7.6 7.2 0.0 2 23 553 575 552 575 0.93 6 12 0.96 57 4.5 0.9 2 20 586 604 586 606 0.87 7 12 0.00018 0.011 16.2 0.1 3 23 616 636 616 636 0.97 8 12 0.15 8.9 7.0 0.0 3 23 673 694 672 694 0.93 9 12 0.00099 0.059 13.9 0.9 2 23 712 733 711 733 0.97 10 12 0.00018 0.011 16.2 0.2 1 23 739 761 739 762 0.95 11 12 6.8e-06 0.0004 20.7 1.9 1 23 770 792 770 792 0.98 12 12 0.036 2.2 9.0 2.3 1 23 798 821 798 821 0.92
Sequence Information
- Coding Sequence
- ATGGGAGATACAATTTACTGTACACTTTGTTTAGTAACAGATAGGAAGATGTATAAAATGAACGATAAAATGTATTATACTTACAATTGGCTAATACCGTCACAACATAAACTGAAAAAGTGCCAAATGAGTGCATGTTACGAATGTAGATACATGCTGTATAAATGTGACAAATTTAAAGAAAAATGCCACAAGGCATACCATATTCTTCTGGAACTTACTGGTGGTACATTTCAGATAACCAAAGAAGACATTGAAGCAATAGATCTGAAGGAAAATGGATTAGGATCATCACTCAAAACAGTAATTGGTGGCAATGTCATTGAAAAAACAAGTCAAGAAGAGTATGGTCCAAGTAATTTGTGTGTAGTTGAAAATATAAAATGTGAACCAGATTTTGAGCATATAGAAGAAATCAATGATGTAAATAATGCTCCAACCAGCATTGTATTACCACCACCACAACCGCCTAGTTTTCATAAAGTTATGATTGATGACAATCATGCATTGGAAAGTGTCAACATTAAAGAAGAAGTGAATGATACTTTAGAAACTAAAGTTGAAAATAATGGAGAAAATATAGACTGTGATACTAATAACAAATCTAATAAAGACACAAATTTAGGCAAAAGCAATGTTGAAGATTTTAACATAGTTTTACACATTGAACCTGAAAAAGAAAATAATAAAAATGTCCAAAAAAACAAAAAATTGTCCAAAAATAGGAGTGATATTGACTTTGATTGTGACAAAGATGCTGATGAATCAAATAATGACGACCCTGATTATGAAAGTGATGAAAACCACATTGATTCTGACAGTGATGAATCGAATGCAATCATAGACAGTGACAACATGTTGAGTGAAACTAGTGATATTGAGTCTGATAGTGATGACCTAGGTGACAGTAATAATGATGATTCTAATAATGATGACTCAAAAGAGAATACAGATGACTATGATAGTTGCAAGTCAGACCAAACCAAGGATATGGATTATGATAGTGATGGGTTAAACGAAATTTTAGCCAGGTACCCTGATGTACAAGATGACTGTGATGACGAAGTAATAATACCACAAAAACGAAAGCTTGGTATCCAGGATAATAAGAAAAAAATTAAAAACGTAAAAGTAAAGAGAAGAAAAATGACTGCAAAGACTATCACAAATCTAGATACAATTTTTAACACAATTGAAAAAAGCAGGCAGAGATATGAGACAAGTATTGATAAAAGTCTTTATGACAAATATGCCACTGTTATCGAACTGACCTCTCAAGATGCGAGACGAGAAGTACAGTTAAGAAAAGAGTCAAGAAATTACAATATTAGTAAATATAAATGTGAGTTCTGCTTCAGAGGCTATTCTTTGAAAACAACATTTGAAACTCATATGAATAAACATAGTGAGAATGAAGGCCCATTTGAATGTGATGCCTGCTTGGTCAGGTTTGCTTCTGAACCGAAACTGAAGAAGCACTTTATATCTTGCCATATGTATAAATTCATCTGCAAAATTTGTTCGTACGTGTGTTTTTCAGCTCACCAAAGTCTGAATCATATATTACTGCACAAAGGCAAGATGCACGAATGTCAGCTGTGCGGAGAGAAATTCAGTGTGTTCTCACACCAACGCATGAAACACAGTCTGGAGGTGGTGTGCGATCTGTGCGGCAACGCGTTCGCCGCAAGGAAAGGATTGGTGGCTCACAAGAATCTAATTCATAAAAAGGAAAAAAACGAGTACCAAGGACCAAAATGCGATGAATGTAATGTACACTTCACAAATGACTACGCTCATAAAAGACATCTTGTGCTGTGCTCTAAGCATGAAGTTAGCAACGGCTGCACAGTGTGCGGGGAGGTGTTCCCGGACAAGTCGCGCCTCAGAGCGCACCGCAGCGGACACGAGCTCGTGGCGGCCAAGCGGCGGCGCGCCGTCCTGCCGCGACGGAAGAACAAGACCGAACACGACGACGCTGCGGACGCGCATAGCGAGGACCCGCCGCTCGGTCCCTGCGCTTACTGTGGCATTCCCCTGCCCACCGCCAAGGTGTACAACAAACACATGTTGGCGCTGCACGGGAACACGGAAATCGCAGAGAAAATAAGGATCCAAAAGGATTTGAAGTGTGTCTGTGAAATATGTGGAAATCTCTACCAAAACCCAACGCTCCTACAGTCACACCAGCGCACGCACACGGGCGAGAAGCCGTACAGCTGCGACGCGTGCGGCAAGTCGTTCAGCGTGCCCAACGCGTTGAAGGGCCACGTGGCGCGACACCACACCCACGCCAAGGAGACGCCCTACGAGTGTGCCGTGTGCGGCAAGCAGTACAAGTTCAAGGGCCAGTACCAGAAGCATATGAGGTACCACTCCTCCGATCGTTTATATAAATGCACTGGATGTGACAAAAGATTCCTCTTCTTTTATGAGATGAAAAATCACGCCAAATATGTTCATGAAAAGGTGCCGTGGCCCAAACGAAATAGAAAAAAGAACACGAATGAAACGGAATATAAGCCAAATTAA
- Protein Sequence
- MGDTIYCTLCLVTDRKMYKMNDKMYYTYNWLIPSQHKLKKCQMSACYECRYMLYKCDKFKEKCHKAYHILLELTGGTFQITKEDIEAIDLKENGLGSSLKTVIGGNVIEKTSQEEYGPSNLCVVENIKCEPDFEHIEEINDVNNAPTSIVLPPPQPPSFHKVMIDDNHALESVNIKEEVNDTLETKVENNGENIDCDTNNKSNKDTNLGKSNVEDFNIVLHIEPEKENNKNVQKNKKLSKNRSDIDFDCDKDADESNNDDPDYESDENHIDSDSDESNAIIDSDNMLSETSDIESDSDDLGDSNNDDSNNDDSKENTDDYDSCKSDQTKDMDYDSDGLNEILARYPDVQDDCDDEVIIPQKRKLGIQDNKKKIKNVKVKRRKMTAKTITNLDTIFNTIEKSRQRYETSIDKSLYDKYATVIELTSQDARREVQLRKESRNYNISKYKCEFCFRGYSLKTTFETHMNKHSENEGPFECDACLVRFASEPKLKKHFISCHMYKFICKICSYVCFSAHQSLNHILLHKGKMHECQLCGEKFSVFSHQRMKHSLEVVCDLCGNAFAARKGLVAHKNLIHKKEKNEYQGPKCDECNVHFTNDYAHKRHLVLCSKHEVSNGCTVCGEVFPDKSRLRAHRSGHELVAAKRRRAVLPRRKNKTEHDDAADAHSEDPPLGPCAYCGIPLPTAKVYNKHMLALHGNTEIAEKIRIQKDLKCVCEICGNLYQNPTLLQSHQRTHTGEKPYSCDACGKSFSVPNALKGHVARHHTHAKETPYECAVCGKQYKFKGQYQKHMRYHSSDRLYKCTGCDKRFLFFYEMKNHAKYVHEKVPWPKRNRKKNTNETEYKPN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -