Etag007194.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990101.1:2557812-2574357[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 4.8 2.9e+02 2.3 0.2 1 23 256 279 256 279 0.92 2 10 1.6 96 3.8 0.1 1 20 311 330 311 333 0.82 3 10 0.0031 0.18 12.3 0.8 1 23 386 409 386 409 0.94 4 10 7.5e-06 0.00044 20.6 2.7 2 23 414 435 413 435 0.97 5 10 0.0022 0.13 12.8 1.4 2 23 443 463 443 463 0.97 6 10 0.00015 0.0086 16.5 2.9 1 21 469 489 469 494 0.94 7 10 0.00042 0.025 15.1 0.4 1 23 502 525 502 525 0.94 8 10 0.00056 0.034 14.7 0.2 1 23 531 554 531 554 0.97 9 10 0.00023 0.014 15.9 2.6 1 19 564 582 564 586 0.92 10 10 5.3e-05 0.0031 17.9 2.2 2 23 593 615 592 615 0.96
Sequence Information
- Coding Sequence
- ATGGAACAAGAAGTAGCGGTGTGTAGTGGCTGCCTAAGCACTGATCGCAATTTAGTTTCAATTAATGAATCTGGAGCAGTGCATCAAATATTTCGTCTTTTGATGTACGAATTCGCGGGCGACAGGTACGGCGACACACTCATGGACGTGACTCAGCTGTTGTGCTGGGAGTGTCTGGCGCTGATGAAGAGGTTCGCCAGGTTCCAGCGGCAGGTGCAGATCGCCCAGGAACACCTGCGGGTCCTGGCTCTCAGCCAGACCGCGGAGACAATAGACCACACATACATGTCTCAGTCGTTATCCTCTCTGGAGACCAGTTTGAAGGCGGACTATGACAGCATATATGTGGACATCCGTGGACATACCTCAACAGAGGCGAAGAACGATTGGCATCGGTTCATAACTGTTTCCTCGTCAGCTATGAAGAGCGAGGAAGGCAGAGTACCCCATGAAACTGCGGAAATAATCCTGGATGACGTGTCGGAGGCAATGCCGCAGATCGTGATAGGTCCGGAGCTGGTGGCCACCGAGATGAGCCTGGACTATGGAACGGAGCCTGTCAAGGGGGAAGTCTCTGAGCTGATCATTGATCCAATAACGTCGGAAACAACTGTGATTCTCAAACCGGCGCCCTCCATGGCTGCGCAGCCGAAGCTTGAGAAATCCACCTTAAAATTGGGGTATACTATCGAGTATATGACTGAAGAGGAAATGCTGGCGTCTAGGGAGGAAGAAAAGAAGAAAATTCACTATGCGAGTTCGGTGTACAAGTGTGAACTGTGCATCATCGGGTACTACTCGGAGCAGCAGGTGCAGGACCACTTCCTCACCGTGCACAAGGGGGGCCCCGGCTACACGGCGTGCAAAGTGTGCTACGTGTACGTGGAGTACTCGAAGCTGCGCGAGCACGTCGAGGGCCACTACACGCGGTACGTGTGCAAGCTGTGCCCGCACGTGTCGCGCAGCGAGCCGCTCGCGAACCAGCACGCGGGCGAGCACCGCGCGCGCGCCCCGCCCGCCGCGCTCATACAGATCGCCGATACGCAGCCGAACAAGGGTCGCAAGAGGAAAGAGAAGGAGAGCGACCAGAACCCCACCGCCGACGTGCCGAAGGCCAATATAAGGAAACTCCTCAAGAAGACAACCATATCCGGCTACAAGTGCTTGGAGTGCGATATGTTCTTCAAGAACTCAAGGGCGCGTAAGAACCACGCAGCGCGGGTGCACAGGGGGGGCGTTCAGTGCGACCACTGCAAGAAGACGTTCGTCAACAAGACCACCCTGGCCACGCACCTGAGACTGCACGAGGGCCCGCTGCCGCGCGAGGAGTGCCCCGTGTGCCACAAGATGGTGCGCTCTATCCAGCTCAAGTACCACATCCGGCGCCACGAGACCAAGAGCCGATACGAGTGCAAGGAATGCGACAAAGTGTTTTCGCATCTGACGACGTATCATGCGCACTTGAAATATTCGCGCGCGCACGCCGACGAAGCTGTGTTCAAATACCCATGTCCGATGTGCAACAAAGGGTACCCGACCAAGGAGAGCATGCAGGACCACTTCAACTACCAGCACCTCGGGAAGACGACGCACAAGTGCCCTATATGTAGCAAGCCAATAGCATCAAGAGCGAACGTCGACAAGCATATGATGCGGGTACACGGCAAGAAGAAGGAGAAACCCAGGAACCACATCTGTCCGCAGTGTAACAAGGCATTCACTGACAAAAAGGCTCTGAAACAACACTGCGTGATCCACTCGAGCGAGCGGCCGCTGGTGTGCGAGGTGTGCCACCAGAGCTTCAAGCAGAAGGCGTCGCTGTACACGCACCGCAAGCGCGTGCACAAGCTGGCGCCCGCCAAGCGCACGCTCACCTTCATGCAGCCCTAG
- Protein Sequence
- MEQEVAVCSGCLSTDRNLVSINESGAVHQIFRLLMYEFAGDRYGDTLMDVTQLLCWECLALMKRFARFQRQVQIAQEHLRVLALSQTAETIDHTYMSQSLSSLETSLKADYDSIYVDIRGHTSTEAKNDWHRFITVSSSAMKSEEGRVPHETAEIILDDVSEAMPQIVIGPELVATEMSLDYGTEPVKGEVSELIIDPITSETTVILKPAPSMAAQPKLEKSTLKLGYTIEYMTEEEMLASREEEKKKIHYASSVYKCELCIIGYYSEQQVQDHFLTVHKGGPGYTACKVCYVYVEYSKLREHVEGHYTRYVCKLCPHVSRSEPLANQHAGEHRARAPPAALIQIADTQPNKGRKRKEKESDQNPTADVPKANIRKLLKKTTISGYKCLECDMFFKNSRARKNHAARVHRGGVQCDHCKKTFVNKTTLATHLRLHEGPLPREECPVCHKMVRSIQLKYHIRRHETKSRYECKECDKVFSHLTTYHAHLKYSRAHADEAVFKYPCPMCNKGYPTKESMQDHFNYQHLGKTTHKCPICSKPIASRANVDKHMMRVHGKKKEKPRNHICPQCNKAFTDKKALKQHCVIHSSERPLVCEVCHQSFKQKASLYTHRKRVHKLAPAKRTLTFMQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -