Etag004961.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990072.1:2218215-2229593[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 5.2 3.1e+02 2.2 0.6 2 21 260 279 260 281 0.74 2 11 2.6 1.5e+02 3.1 1.5 5 22 289 306 287 309 0.89 3 11 0.08 4.8 7.9 3.1 2 23 438 460 437 460 0.92 4 11 0.0013 0.079 13.5 0.0 1 23 466 488 466 488 0.92 5 11 0.01 0.62 10.7 0.1 1 23 498 521 498 521 0.92 6 11 8.4e-06 0.0005 20.4 4.2 1 23 526 548 526 548 0.98 7 11 1.2e-05 0.00072 19.9 1.8 1 23 554 576 554 576 0.97 8 11 4.8e-05 0.0029 18.0 6.1 1 23 582 604 582 604 0.98 9 11 6.2e-07 3.7e-05 24.0 0.1 1 23 610 632 610 632 0.97 10 11 0.0085 0.51 10.9 2.2 1 23 638 660 638 660 0.96 11 11 0.012 0.73 10.5 0.2 1 21 692 712 692 716 0.90
Sequence Information
- Coding Sequence
- ATGGAAGTGTTTCTCTATAATTCTAATGTTTGTAGATTATGTGGAGAAGAAAATGACAATGGAAACTTATTATATACTAATGAAGAAAATAATCAAAACTTATGCGATATAATTAATGGATATTTGCCAATCCGGGTGTCAGATGATGGGGAGTTGCCTAGAACTATTTGTCCAGGATGCACTATACAACTGGAAGCCACAGTTGAATTTCTTAATTTGATAATAAATGGCCAGAAACTTATACGTGAGCTTTATGAAAGAGAAAAAGAATACAGAAAAACTATTCTGAAGGGCACAAAGGAAGAACCGGAAGTTATAACTGAGAATATAGTCTATGAAATTAACACAAGTGATGGAATCTATCATGTGGAACACCCCATCTCGCTTCAAGTCGGAGGCCTGGAGAAGCCAAAGCGCAAACGGGGGAGGCCTCCAAAGAAGTCGAAAACACCTGAGGAATTGGCAGCAGAGGCGGCAGCAAAAGAACAGCAGGCAAAAGCTCAAAAAATCCAAGAAGAGAACGCCAAGACCTCTTCTGGGAAACGGAGGAGAAAAACGCCTACCAGGTTCAAGGAAGTTGTCCAGGGTGCGGAACTAGAGCGCATTTTTAAGGAGGAGGGCGTGATAGAGAACGAGGAGAAACCGGCGGAGCGGCGCGGGGAGCCGCCGCGGGAGCCCGAGGTCATCGGCCATCTGGAGACCGGCGGCGACCTCGTGCTGGTCACGCGGGGCAAGGGCCGCGGCAGGCCTAGAGGTCGCATGCTCCAGAAGCGCGAGCAGTGCGTGATATGCGGCATGGAGTTCACGTGCCTCGGGCGCTACATGTCGCACGTGGCGCAGCACGGCCCCGTGCGGTACCGCTGCGGCTGCGGCCAGGAGTTCCAGAAGAGACTGCACTTCAACGATCACCAGCGGGACCTGGACCACACCGGCTTGACTGTTGTCAACTTTGACCCGGCTAGTCCAAAATCCAAGAAAAAGCTTAAAGAGCTCAAACCAGTCACAAAAGAGCCAGACAGCGCTCCCGAGTGTCTAGACTTGCCCATGGTTGACGCTAGTAGTGAAGTGCTTGTGGAGGAGAGTGTGCAAGCCCCCGAGCTGCCAGGGTTGCCGGACATCAACCCCGACGGGGTGCAGATGAAGCAGGAGCTCATTGTGGTGGACGACAGCCCCAAGGCTCCCGTGGCTATGGACATCCAACCTACCCCTATTCCACCTGTTTCTGAAGCTCCAAGTATAGACAAAGCATTAGAAACGTTATTCGCCGAGCCCCAGCCTGAACAGAAGTCGGCTGTCGTCAAAGAGAAGCTGAAATGCAACCATTGTGAGAAACTGTTCAGTAACAAGCAGAGCAAGTCACTACATACCAAGGCAGTGCACCAGGGCGAGCGTCCGTACGCGTGCAAAGAGTGCGGCGCGACGTTCGCGTACCCGCGCTCGCTGGCGCTGCACGCCGCCGCACACCGCCGCCGGGCCGCCTCCAGCCGGGGCTACGCTTGCGATCTGTGTGGCAAGGTACTGAACCACCCGTCCTCGGTGGTGTACCACAAGCAAGCGGCGCACGCGGACCAGCGCTACGTGTGCGGCATGTGCGGCAAGCGCTTCCGCCACAAGCAGCTGCTGCACCGGCACCAGCTCGTGCACGCGCAGGAGAGGCCCTTCCGGTGCAATGTGTGCACAGCGACGTTCAAGACGAAAAGCTACCTGATGAACCACCAGCTGCTGCACTCGGGCATCAAGAGGTTCACGTGCGAGATATGCAAGCACAAGTTCTCACACAAGACCAGCCTCACGCTGCACATGCGCTGGCACTCGGGCGTGAAGCCGTTCGCGTGCGGCGTGTGCGGCAAGAGCTTCAGCCAGAAGGGCAACCTGTCGGAGCACGAGCGCATCCACACCGGCGAGAAGCCCTTCGCGTGCGCGCTCTGCCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACGCGCGCCGCCATGCCAGAGTGCGCGCGAACCAAGCCCAGCGGGAGGCCAGTGGGGCGGAGGGCGAGGCGGAGGGCGGGGCGGAGCGCCCTCCCTTCACGCACTCACACCGGTGCGCCACGTGCGGCAACGTGTTCGCCTCCCGCTGGGCGCTCGCGCAGCACTCGCGCGCCTACGGACACAGCCAACGCAAGCCTTCACAGAAACAAGTCAGCCTACTGGTGAATGACAAGTCGCTGCAGGCAGAGGCGGTGGCCGCGCCGCTAGCGGTGGCGGACGCGGTCGCGGAAGTGGAAGCGGAAGCGGACGCGGATTCCGACGAGCGCGTCATATACGTCGCTTACGATGTCGACGGATCCGACGCGTTTCACATACTGGACCCTGAACAGACAGTGAACCTCGACGACAGCAAAGTGCTGACGACGTGCGAGCTGTACTCCGGCTCCTCGCTGCTGGTGTCGGAGGAGCTGGCGCTGTCGCCGCTGCGCCAGGAGGAGCCGCGGCTGGGCGCGCAGGACGAGCATCGGCTGGACGGCGATGACTACCCGCATAAGCATATACAGGTGACGGACGCAGCGGGCAACCCGCTGCACTTCACGATGCAGGACGGCACGCGCCTCGCCATCACCTCCGCAGACGGACACTCGCTGCAGGTCATAACACAAGATGGTCAGACCATTCCGGTCGAGATCAACGGGCACACCAATGATGATGAATTGGACACGGACACGACGGTGCACCAGCTCGACTTAGAGAAGGACATGGACTCCGGCAGCAGCTCTCCAGTCACCACCTACTTCACCCTCGTTTAG
- Protein Sequence
- MEVFLYNSNVCRLCGEENDNGNLLYTNEENNQNLCDIINGYLPIRVSDDGELPRTICPGCTIQLEATVEFLNLIINGQKLIRELYEREKEYRKTILKGTKEEPEVITENIVYEINTSDGIYHVEHPISLQVGGLEKPKRKRGRPPKKSKTPEELAAEAAAKEQQAKAQKIQEENAKTSSGKRRRKTPTRFKEVVQGAELERIFKEEGVIENEEKPAERRGEPPREPEVIGHLETGGDLVLVTRGKGRGRPRGRMLQKREQCVICGMEFTCLGRYMSHVAQHGPVRYRCGCGQEFQKRLHFNDHQRDLDHTGLTVVNFDPASPKSKKKLKELKPVTKEPDSAPECLDLPMVDASSEVLVEESVQAPELPGLPDINPDGVQMKQELIVVDDSPKAPVAMDIQPTPIPPVSEAPSIDKALETLFAEPQPEQKSAVVKEKLKCNHCEKLFSNKQSKSLHTKAVHQGERPYACKECGATFAYPRSLALHAAAHRRRAASSRGYACDLCGKVLNHPSSVVYHKQAAHADQRYVCGMCGKRFRHKQLLHRHQLVHAQERPFRCNVCTATFKTKSYLMNHQLLHSGIKRFTCEICKHKFSHKTSLTLHMRWHSGVKPFACGVCGKSFSQKGNLSEHERIHTGEKPFACALCPRRFTTSSQHRLHARRHARVRANQAQREASGAEGEAEGGAERPPFTHSHRCATCGNVFASRWALAQHSRAYGHSQRKPSQKQVSLLVNDKSLQAEAVAAPLAVADAVAEVEAEADADSDERVIYVAYDVDGSDAFHILDPEQTVNLDDSKVLTTCELYSGSSLLVSEELALSPLRQEEPRLGAQDEHRLDGDDYPHKHIQVTDAAGNPLHFTMQDGTRLAITSADGHSLQVITQDGQTIPVEINGHTNDDELDTDTTVHQLDLEKDMDSGSSSPVTTYFTLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -