Etag001768.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990100.1:3706504-3715754[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0016 0.092 13.3 1.6 1 23 497 519 497 519 0.98 2 9 0.0016 0.097 13.2 2.7 1 23 570 593 570 593 0.96 3 9 0.00092 0.055 14.0 0.3 3 23 600 620 599 620 0.97 4 9 2.8e-05 0.0017 18.7 4.8 1 23 632 654 632 654 0.98 5 9 9.8e-05 0.0058 17.0 0.2 3 23 661 681 659 681 0.97 6 9 6.8e-06 0.00041 20.7 3.0 1 23 690 712 690 712 0.98 7 9 8.5e-06 0.00051 20.4 0.6 1 23 718 741 718 741 0.94 8 9 1.5 89 3.9 0.8 2 13 748 759 747 770 0.78 9 9 0.00037 0.022 15.2 5.6 1 23 778 801 778 801 0.97
Sequence Information
- Coding Sequence
- ATGTTGCATAATAACGACCCGTATGGGTCGTCGGAACCGCAACTAAACATGGGTGCTTCAGTAAACATGAACATGAACAGTCCTCTTAACATCGCAAATGGCTATACCGACATCAGTAAGCCCTCTCACGAAGGCCCGCAGACCCCTGCCGCGCACTACAATATACCAAACTACGGGAATTACGGCCATTCGTTGATGAGTACGCATCCATCGATGCATTCCTTTCAAAACTTCCAATCGAATGTGTTTCAACCTTCGTTCGTGCACAGCGCTCCGCCTATACACGAATCTAACTGGGCTCCTATCCTGCCTATGAATTTGAACGCGCAAGCCGACAACATGAACTATTACGAGCGCGAAAAGTTGCATAGTGACTACAGAGACCAAAATTTGAGTAAGAATGTGGCTCTAAACGTCCCCCATGTATATCCTAAGCAATACAAAGAACCCGTAATGCATACTAATTACCACAGCTATCCTACTCCTATAACACAATGTGGAGAAAACATAGACCTAAGTAGGAACAGACTAGCAAAACCCCCAGAGACCTCCCAGAGATCCTATAACATGGATTTAAGTACTAAATCGCCTATGATGGATGAGTCAAGACGGCGGAGCTTGGAAAACACAGTTAAAATGATTGAAAACATACTCATTCATAACCCGACAAATACAAATAGATATCCACAGGCATCATACTCAAAAGCTGAGACACCATCTGTTATACAATCTACTAAAGAAATAAACAAAATTGCATTCAATGACAAAAACATGTATCATGAAAAACAAATAGAAAAACAGAGAAATATTTGCAACGAAAAAGAAGTTCACAAAGACAAAAATGTGGTTAATGAAAAAATTTCAATTCCTGAGAAACCTGCAGTAAATGAAAAAGATGTGAGCAAAGACAAAAATATGTATAATGAAAAAGACGCATATAGTGAAAGAAACATAGAAAACAGAAAATCAAGTAACATAATTCAAAGTTTAACAATTAAGCCACAAGAACCCAAACCCAACGAAGATAAAGAAGTGGTAACAGAAAAAAAACCTGAAGACACTCCAAAATCTATACACAGCGCCAGCACAGAAAACAGCATTGAGAGTGAACTGAACAGCGACGAACGAAACAACAATATAGCATCAGAAAACGAGGGTAACGAAACTACAAATATAAACAACGAAGTTGAAAAAATAACAGTAAAAGTCGAACCTCAGATCAATGAGTCGGATTCTGAAGATATGATATCGTTAATGAGGAGAGAATCTAATCTTGAAAGTGGAGAGCTACCTCAAAGTGGTACAGTCGAGGTCAAAATTGAGAAATTGACCAATTGGGACGATTTGGACGGGAATCCTTTCTTGAAAGATGTGTTTGGTGTGACACAGGTAGAGCCAGACTGCATCATTGTTCAGGCATCGCTCAGCGTCACTGTTGCTGAAAAAGCTGTTTACAATGCACCAGACGTTACATCAAACCCACACTTCTACGAGTGTTCCGAGTGCGGCCTATACTTCTCAAACCCCAAAAGGTTCCTCATCCACCACAAGTGGCACTCCTTCGGGCTGACCAACGAGAAGAGATGGGAGGAGAAGATGGAACAGTTGAAAGAGAGAGAAATGCTCAAGAACCAGCGGAAAGAGGCACGGCAGCTGATGAAGTTGAGCAATGAGGAAGTTAAGGATGGAGAAGTTATAGGAGAAACCTTTAAATGCAACTCCTGTGAGAAGGTCTTCTTGACAAGGAGCAGTTTGAAGAACCATAAAATAAGATACCACAAGAACCGCGCGCGCGACTGCCGCATATGCCAGACGTCGTTCAGCAACTACGCGGCGTGGCGGGTCCACCTCAAGAGCCACGTGCTGGAGGGCGAGGGCGGCGGCGAGGCGCGCTACCAGTGCGACCAGTGCGACAAGCGCTTCAAGTATTCGCACTCGCTCGTCAAGCACAAGGACACGCATCTGGAGAAGACAATGGCGTGCCAGCAGTGTCCGAAACTCTTTGGCTCGAAGGCGCTTCTGAACGTTCACATGAAGACCCACGAACGGCACGAGAGAGGGCTTATCTACCACTGCACCTACTGCGGGAAGGGATTCTTCGACTCCTACACGCTACAGATTCACGAAAGAACACATCGAAATGAGAGACCGTTCCTCTGCACAATATGCAACACTAGTTTTGGTACTAACTCCGGGCTGCAGCGGCATTTGAAAGTGTCGCACAGCTCAGCGAAACCGTGGCAGTGCGAGACGTGCCACCGCAACTTCGTCTCGGAGAAGATCCGCGACCGCCACGTGCTGCGCTTCCACACGGACCAGGCGTCCTTCAAGTTCGAGTGCACGCTCTGCCCGCACAAGTACACCAGCCAGAAGGACCTCAACAAACACATGCACAAGAACCACCCGAAGCCGGGCCGCAAGCGGCGGCCGCGGAGGAAGCACGACGCGGACGACGTCGCCGACACCGAGAAGTAG
- Protein Sequence
- MLHNNDPYGSSEPQLNMGASVNMNMNSPLNIANGYTDISKPSHEGPQTPAAHYNIPNYGNYGHSLMSTHPSMHSFQNFQSNVFQPSFVHSAPPIHESNWAPILPMNLNAQADNMNYYEREKLHSDYRDQNLSKNVALNVPHVYPKQYKEPVMHTNYHSYPTPITQCGENIDLSRNRLAKPPETSQRSYNMDLSTKSPMMDESRRRSLENTVKMIENILIHNPTNTNRYPQASYSKAETPSVIQSTKEINKIAFNDKNMYHEKQIEKQRNICNEKEVHKDKNVVNEKISIPEKPAVNEKDVSKDKNMYNEKDAYSERNIENRKSSNIIQSLTIKPQEPKPNEDKEVVTEKKPEDTPKSIHSASTENSIESELNSDERNNNIASENEGNETTNINNEVEKITVKVEPQINESDSEDMISLMRRESNLESGELPQSGTVEVKIEKLTNWDDLDGNPFLKDVFGVTQVEPDCIIVQASLSVTVAEKAVYNAPDVTSNPHFYECSECGLYFSNPKRFLIHHKWHSFGLTNEKRWEEKMEQLKEREMLKNQRKEARQLMKLSNEEVKDGEVIGETFKCNSCEKVFLTRSSLKNHKIRYHKNRARDCRICQTSFSNYAAWRVHLKSHVLEGEGGGEARYQCDQCDKRFKYSHSLVKHKDTHLEKTMACQQCPKLFGSKALLNVHMKTHERHERGLIYHCTYCGKGFFDSYTLQIHERTHRNERPFLCTICNTSFGTNSGLQRHLKVSHSSAKPWQCETCHRNFVSEKIRDRHVLRFHTDQASFKFECTLCPHKYTSQKDLNKHMHKNHPKPGRKRRPRRKHDADDVADTEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -