Etag001874.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990087.1:463878-468096[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.4 2e+02 2.8 3.3 1 20 241 260 241 263 0.81 2 13 0.51 30 5.4 0.4 6 23 275 293 275 293 0.97 3 13 9e-07 5.4e-05 23.5 0.4 3 23 353 373 352 373 0.97 4 13 0.0001 0.006 17.0 0.5 1 23 381 404 381 404 0.95 5 13 0.013 0.79 10.3 0.2 1 23 410 432 410 432 0.96 6 13 2.4e-05 0.0014 19.0 0.4 1 23 438 460 438 460 0.96 7 13 0.007 0.42 11.2 7.1 1 23 466 488 466 488 0.97 8 13 0.97 57 4.5 1.3 1 23 611 633 611 633 0.94 9 13 0.00012 0.0073 16.7 0.8 2 23 640 662 639 662 0.92 10 13 0.0029 0.17 12.4 0.1 3 23 670 690 668 690 0.95 11 13 3.9e-06 0.00023 21.4 1.7 1 23 696 718 696 718 0.98 12 13 0.00081 0.048 14.2 0.5 1 23 724 746 724 746 0.97 13 13 0.073 4.3 8.0 0.7 1 23 774 797 774 797 0.90
Sequence Information
- Coding Sequence
- ATGGCAAAGGTGGTCCCACCGGAGCGGCCGGGGCCGCCGACGCCGTCGAACGCCGCCCGTTCGCGGTTGGAGGCGCTGTATTCCAAATATTCTTGTAACCGCGTCATGCCGGATGAGATTGCAAGAGAAGATACCACGGAGAAAATTTGTCGTGTTTGTTGTGCCGTCTCGGAGAAGACCCACCCCCTGTTCACAAAGGGTGTAAAGGGTCTGGGGCGCCTGGTGAACATGATCCACCAATACCTGCCCCTCAAGATTGCGAAGAACGACGGGCTGCCGCAGAACATCTGCTCGGACTGCTGCGACGTGCTGCAGGGCTGGCACAAGTACGCGCGCCAGGCGCTCCTCGCCGAACTCGAGCCGAGGCCGAGCGCCGACGCCGGCAAAACCAGCAATGGAGGAAAGTCCGACTCGCTTTTGGTCACTTCTATCGTTAAAAATGTGCTGATAAATTACTTCCACGCCCTGAACTTAGAAGAGGACTACTCGGATTTCGAATACAACTGTCAAAAGTGTAACGACCGCTTGGTCGGCAACACGGTGCAGGATCTGGCGCGGCATCTCTGCGAGGAGCACGACTCCGAAGTGCACAGCCTGCGAGGGATCGAAACGTTCATAAAGGACCACTTGACCTTCGAGGAGAAGTTGACGATCGACGACTTCGAGGACGACGGCGGGGACGAGAAGGAGCGAGACGCACACGCGGCGACGCTCCCCGAGTTCTGCTGTCCGCACTGCGAGAGCGCATTCTCGTCGGCGGCGCGGCTCGTGTGCCACCTGGGCCAGCACGCCAACGTCGACGTCGACCGCGGGGCGCCCTGCTGCGGACACCTGTACACCGACCGCGAGGCCTTCGCCGCGCACCTGCGGCGCCGGCACGCGACCCGCGCCCTCGCGCCCACCACCTGCCGCGCCTGCGGGTTCACCGCGCTCGACGACTCCCAGCTGCGAGCCCACATCGGTCGAGCGCACGTCGAGCCGGCGGACACCCGACACAACATTAAGAAGGCCGGGTCTCCGCCCGGAACCAAGCGGCAAAAGGACATCCCCGCGCCGTGCCCCACCTGCGGCAAGGTGTTCTCCAACAAGTACAACATGCTCGCCCACCGGAAGAGTCACGACGGGAGCCCGCCGGAGGAGCACGCGTGCGAGCGGTGCGGGAGACGCTACAAGAGCGCCGGCAGCCTGGCGAGCCACCGGCGCGTCGTGCACGCGGGCGAGCTGCGGCACGTGTGTGCGCGCTGCGGCGAGGCCTTCCCGTCCAGGAGCGCGCGCGACGTGCACACCCGCCTGCACTCGGGCGCCGCGCCGCACGCCTGCCCCTACTGCGGCAAGGCCTACCGCGCCAAGAACACGCTCGCGCGCCACCTCGAGATGCACCTCGACGTGCGCAACCACACCTGCCACCTGTGCGCCAAGGCGTTCCGCAAGAAGACGCACCTCCGCTACCACGTCGGCACGCACCGGCCGAACGATGCGCCCGGAGGCGACCGAGCCGAGTTCGATCTCGCATCGTTCTCCGACGACGAGGACGCTCCGCTCTCGAGCGTCGTCTCCGAGAGGACCTCGACGGAAGCCTACGATAGGTTCTATCGGGCGCTCGTAAGCTTTCGGAATCACCTCGCGAACGATCACGAGGCTCGAGAGGACGATCGCTCCGACTCGACGGACACGGACTCCGAGGAGGGCGACGACTCCCCGGGGAGCCGGGAGCTCGACGTGGACCGCTTCGACGACCTGACGCCGCTCAACATGCGGAGGGACCGCATGGACGAGCGCACGCGGCTCGAGCTGAACGAGGCGCGCGTCCGGGTCGACGGCCGCGTGTACTTCGCGTGCGACACGTGCGGCCGGAGGCTCGGCTCGGCGCACACGTACCTGTTCCACCGGCGCATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCCGCCGGCCTGCAGCGCCACCTCGCCGAGACGCACGAGGGCCTGCGCCGCCTCGCCTGCGACCTGTGCGCCGACACCTTCGCCAACCCGCAGAACCTGCGCCAGCACCGCCGCATCCACACCGGCGAGCGCCCCTTCGAGTGCGCGCTCTGCGGCCGCCGCTTCACGCAGAGCGGCTCGCTGCACGCGCACCGCAAGACGCACGACGAGCGCCGCGCGCACCGCTGCGCCGAGTGCGGCGCGCGCTTCCGCCTGCGGGCCACGCTCGCCCGCCACGCGCTGCGACACGCCGCGCCGCCCGACGCGCCCGACCCGCCCGCGCTGCGGCTGCGGCCCGAGCCGGCTGCGGCGGTGGTGGCCGCGCGGCCTTTCGCGTGCGGCGCGTGCCCCGCCGCGTTCCGGCAGCGGCGCGCGCTCCGCCAGCACTGCAAGCGCGCCCACGACGCGCACGACGCCCACGACGCGCACGACGCAGCCGACGGCCACCCTCTTGACGATCGACTCGCATACGATCACGCCGCTCCGTACTGA
- Protein Sequence
- MAKVVPPERPGPPTPSNAARSRLEALYSKYSCNRVMPDEIAREDTTEKICRVCCAVSEKTHPLFTKGVKGLGRLVNMIHQYLPLKIAKNDGLPQNICSDCCDVLQGWHKYARQALLAELEPRPSADAGKTSNGGKSDSLLVTSIVKNVLINYFHALNLEEDYSDFEYNCQKCNDRLVGNTVQDLARHLCEEHDSEVHSLRGIETFIKDHLTFEEKLTIDDFEDDGGDEKERDAHAATLPEFCCPHCESAFSSAARLVCHLGQHANVDVDRGAPCCGHLYTDREAFAAHLRRRHATRALAPTTCRACGFTALDDSQLRAHIGRAHVEPADTRHNIKKAGSPPGTKRQKDIPAPCPTCGKVFSNKYNMLAHRKSHDGSPPEEHACERCGRRYKSAGSLASHRRVVHAGELRHVCARCGEAFPSRSARDVHTRLHSGAAPHACPYCGKAYRAKNTLARHLEMHLDVRNHTCHLCAKAFRKKTHLRYHVGTHRPNDAPGGDRAEFDLASFSDDEDAPLSSVVSERTSTEAYDRFYRALVSFRNHLANDHEAREDDRSDSTDTDSEEGDDSPGSRELDVDRFDDLTPLNMRRDRMDERTRLELNEARVRVDGRVYFACDTCGRRLGSAHTYLFHRRIHTGERPCVCHVCGKQFRAPAGLQRHLAETHEGLRRLACDLCADTFANPQNLRQHRRIHTGERPFECALCGRRFTQSGSLHAHRKTHDERRAHRCAECGARFRLRATLARHALRHAAPPDAPDPPALRLRPEPAAAVVAARPFACGACPAAFRQRRALRQHCKRAHDAHDAHDAHDAADGHPLDDRLAYDHAAPY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -