Etag001621.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990100.1:693954-700049[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0018 0.11 13.1 0.1 3 23 174 195 172 195 0.96 2 13 0.052 3.1 8.5 2.5 2 23 200 221 199 221 0.96 3 13 7e-05 0.0041 17.5 3.3 2 23 227 248 226 248 0.96 4 13 7.1e-06 0.00042 20.6 0.3 1 23 254 276 254 276 0.97 5 13 0.019 1.1 9.9 0.3 2 17 284 299 283 300 0.89 6 13 0.0046 0.27 11.8 5.2 1 23 303 326 303 326 0.93 7 13 0.00024 0.014 15.8 2.0 1 23 332 354 332 354 0.98 8 13 0.0024 0.14 12.7 3.4 2 23 364 385 363 385 0.97 9 13 0.00046 0.027 14.9 5.1 1 23 391 413 391 413 0.94 10 13 0.0047 0.28 11.8 5.6 1 23 419 442 419 442 0.94 11 13 0.53 32 5.3 1.3 5 23 453 471 451 471 0.82 12 13 0.0017 0.099 13.2 0.8 1 23 476 499 476 499 0.93 13 13 0.0021 0.12 12.9 1.8 1 23 505 528 505 528 0.96
Sequence Information
- Coding Sequence
- ATGTCTGAAATCTTCAATTTGCGCACTCTGTGTCGCTGTTGCCACAAGGATGGCAACTTCAGGAGCCTCCAGCTGGCCTACGTGTACGAGGAGCGGGTCGAAGTGTACTCCGTGATGTTGCAGGAGACATTCAACATCAATATCGACCCACCTCCATTTGAAGCGAGCTTTACAATATGCGACCAGTGCATTCAAATCCTGAGGGATGCTTCATATTTCAAAAAACAAGTCTTGATGTGCGAACAAAAGTTTGAGGAGTACTGTAAAAATGAACTAGCCTTGATAAAGGAAGAGGTCATAGACGATAGCTATAACAATAAGAACAGCTGGTCCGTGAGCGAGTTTGATAACAATGACATTCAAGAAGAGAAATATGAGCAAAAACCCAAAATGGAATCTGATTTTAAAGTTGATGTCAAGGATACTTTTGGAAAACTCAAGAAGAAGAAAACGCTATCACACAAACTGGACCCGGAATTAGAAATATGCGTGCAGACCAAAAACAAAACGCGCATCATATGCAAAATCTGCGGCAAAGGCTCCACCAAGCTGGTGTCCATACGGCGGCACATAGCCACCGACCACCCGGAGACGGTCACCTGCGTGATCTGCTCGCGAGTGTTCGCACACCGCAAACGGTACCACGAGCACGCGCTGACGCATCTACCGGGCTATCTGACGTGCAGGATTTGCACGAAACGATTTTCCAAGCACAGCGCCCTCATCTCACACATGACGAGACACATGATCACCGATCGCTACCAATGCGACGTTTGCGGCAAGGTATTCACCTCGCGGACGGTGGTGAGACGCCACCTGCTGTGGCACCAGGGGAGGAACAAGACGTGCGTGTGCGAGATATGCGGCCGGGGGTTCAACGACCGCACCAACATGCAGCTGCGACCGTTCATCTGTCGCGTCTGCAACAAGACGTTCACGGCGAACAAGCATTTGAAGGAGCACAATATTCGGTGCCACGTCAAAGAAAGCCCGCACCAGTGCGGGACGTGCGGCAAACTGTTCGGGACGGCGTTTCAATTGAAACAGCACACGTTGAGACACGAAGCGCTGAAAGACCAGCGAGTCAAAACGTGTAAAGTCTGCAAGGCGACGTTCGACACCAGGGGCAAGTTGATGTCCCACCTCAAACACCATGTCGGACAAAAGCACCACAAGTGCCACCTGTGCTCGAAGGACTTTGTCTCGAAGTATACGCTGAACCGACACGTATTCGCGCACACCGGCGTCAGAGCGCACGAGTGTGCGTTATGCGACGCGAAGTTCAAACACCCGACCAGTCTGAAGCGGCACGAGCACAGGTTCCACGACCCCGAACGGATCGTGAACGAGAAAGTGAAGTGCGATGTCTGCAGCAAATATTATAGAGATTTCGACAAGCACATGAGCACGCACGACAAGAGACCGCACGCGTGCGATTGGTGCGAGAAGAGTTATCCGGTGAGAAACGCGCTCAACCGACATGTGAACCACGTGCATTTTGATCGGAAGAGGTTTCAGTGTGCGCTCTGTGACAAGAAATATACCCAGTTCAGGGGTCTGAAGTACCATTCGATGAAGGTGCATTCGCGCGAGTTGAAAAAGGAGGAACATGACGTGTAG
- Protein Sequence
- MSEIFNLRTLCRCCHKDGNFRSLQLAYVYEERVEVYSVMLQETFNINIDPPPFEASFTICDQCIQILRDASYFKKQVLMCEQKFEEYCKNELALIKEEVIDDSYNNKNSWSVSEFDNNDIQEEKYEQKPKMESDFKVDVKDTFGKLKKKKTLSHKLDPELEICVQTKNKTRIICKICGKGSTKLVSIRRHIATDHPETVTCVICSRVFAHRKRYHEHALTHLPGYLTCRICTKRFSKHSALISHMTRHMITDRYQCDVCGKVFTSRTVVRRHLLWHQGRNKTCVCEICGRGFNDRTNMQLRPFICRVCNKTFTANKHLKEHNIRCHVKESPHQCGTCGKLFGTAFQLKQHTLRHEALKDQRVKTCKVCKATFDTRGKLMSHLKHHVGQKHHKCHLCSKDFVSKYTLNRHVFAHTGVRAHECALCDAKFKHPTSLKRHEHRFHDPERIVNEKVKCDVCSKYYRDFDKHMSTHDKRPHACDWCEKSYPVRNALNRHVNHVHFDRKRFQCALCDKKYTQFRGLKYHSMKVHSRELKKEEHDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -