Etag006987.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990101.1:264943-281121[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 1.1e-05 0.00063 20.1 2.9 1 23 250 272 250 272 0.99 2 11 4.8 2.9e+02 2.3 0.3 1 22 279 300 279 302 0.57 3 11 0.0067 0.4 11.3 1.0 1 23 333 356 333 356 0.95 4 11 0.00085 0.051 14.1 0.3 1 23 360 383 360 383 0.96 5 11 0.0012 0.073 13.6 0.1 2 20 394 412 393 413 0.95 6 11 0.0099 0.59 10.7 0.0 3 23 427 447 426 447 0.96 7 11 0.00076 0.045 14.3 2.1 3 23 457 478 455 478 0.95 8 11 0.00015 0.0086 16.5 0.7 2 23 499 520 498 520 0.97 9 11 0.00024 0.014 15.8 3.4 1 23 526 548 526 548 0.98 10 11 9.9e-06 0.00059 20.2 4.1 1 23 554 576 554 576 0.94 11 11 4.1e-06 0.00024 21.4 1.9 1 23 582 605 582 605 0.98
Sequence Information
- Coding Sequence
- ATGGAAGAATTGCTTGCTTGTCGGGTGTGTTTGGCTACAGATAATGCGAAATTGTATAGTTTTTTCAAGTTTCAACTCGCGCAAGCATATGAAGTTCTGACTGGAAGCCAGGTGTTGGTGTCAGATGGGCTGCCACAGCACATATGCAGTTACTGCAGCGCCCTCCTCCTCAAGAGTGTGACCTTCCGAGAGAAGTGCATCAACTCCCAGGATCTTCTCAAGTACTGCTTGAATGAACAGAGTGAGCTGTCAATGGGCTATATCCGGTCCATAAAGCGGGAGATTACCGCCCTGATCCTCCCCTACTCTGTCACCAGCTATGGCCCGATGAACGTGACTGACGATGGAGAGGTGTCTGTCAAAGAAGAGGATAAAGAATCCGACGTACTAACGGACATGCCAGCCATAGCGGCCTTCGACATCAAATACGAGGATGACGCACACAAAAAACGGAAAAGAAAAAAGAAAGGAAAAGAAAAAAAGAACCATTTCAACATAGTCACCATAAAGTGTGAAGACAACCAAGATATCGAAATCCACGAAACCAACAACCAATTTGAATTAGACAATGACTATAATAACTTCAACGATGATACGATAGAGAGTGAGGCGGATAACGATGACATTAATGATGAGGGCATCGTTAATACTGATCTGAAGCACGTGGAGATCGTTAATTTGAGCAAACAAGAACAGCTAGGTGAGATTGAAGCGAGAAAGGCGTCTTTTAACTATACGAATTCAGCGTACAAATGCGATAAGTGCTACAAAGGGTTCATAACGGAGTCCACGTTCAGGAATCACATGCAAAGACATGATCCTAAGAACGGCGCACACGAGTGCGAGATATGCTTCTCCCGCTGGCCGGAGCCCCGGTCGCTGCGAGCTCACGTGCTCAACTCCCACAGACGGAAGTTCATTTGCAAGCTGTGCGATTTCGTGTCCAGGTCTAATCATCGCGCAAGGGAACACTGCAAGTGGCATCAAGGATTCAAATTTATCTGCAAGATATGCGGAGCGTCTTTTGCAAAGTCAACGAGCCACCTCACCCACATACGACTGCAGCACCCGTCGAACCACTCGTGCGACGTGTGCGGGGAGTCGTTCATCGGCGAGTTTGGTTTGCGGATACACAAGAAAAGGGCGCACAGAGACCAGGACATCACTCGAGAGTTATCCGTATGCAACAATTGTAACACCGAGTTCGTCAGCTTAGAAGCGTTAAAGCGACACATAGAATGCTCCACCGACGGCCTGTGCGACGCTGAGACACGGGCGTGCGGGCAGTGTGGCGAGGGCTTCCAGTCGGAAGACCAGCTAGCGGAACACGCGAAGGAACACCAGACCGCCCAGGGGGACAGGGTGCACTGTGACGATTGCAAACGCAGCTTCACCAGCGAGAAGTCCTACTCGGTGCACTACCAGCGCGTGCACTTGGGCGTGAAGCTGCAGAAACGCAAGAGGCAGACGCTCAAGCGGCCCGACGAGCCGGTCGTGTGCGAGATATGCGGCCGGCGGTGTATCACGATGGCAACGCTGAGATACCACCAGCGCATCCACACCGGGGAGCGGCCGTTCCACTGCACAGAGTGCCCGAAGAAATTCTCGGTGTTCCAGCGGCTGCAGATCCACCTCCGCACCCACACCGGTGAGAGTCCGTACAAGTGCAAGCACTGTCCGAAAGCGTTCAAGCATAAAGCGGCTTTGAACAGACACGATCGGGTACACACAGGGGCGAAGCCCTACACGTGTTCGCATTGCGGGAAAGGCTTCTCCCAATCGAATTCTATGAAGCTTCACGTCAACACGGTGCACTTGAAGCTGCCAGCGCCGTATAGGGCTCGACGGAATAAGAACTAA
- Protein Sequence
- MEELLACRVCLATDNAKLYSFFKFQLAQAYEVLTGSQVLVSDGLPQHICSYCSALLLKSVTFREKCINSQDLLKYCLNEQSELSMGYIRSIKREITALILPYSVTSYGPMNVTDDGEVSVKEEDKESDVLTDMPAIAAFDIKYEDDAHKKRKRKKKGKEKKNHFNIVTIKCEDNQDIEIHETNNQFELDNDYNNFNDDTIESEADNDDINDEGIVNTDLKHVEIVNLSKQEQLGEIEARKASFNYTNSAYKCDKCYKGFITESTFRNHMQRHDPKNGAHECEICFSRWPEPRSLRAHVLNSHRRKFICKLCDFVSRSNHRAREHCKWHQGFKFICKICGASFAKSTSHLTHIRLQHPSNHSCDVCGESFIGEFGLRIHKKRAHRDQDITRELSVCNNCNTEFVSLEALKRHIECSTDGLCDAETRACGQCGEGFQSEDQLAEHAKEHQTAQGDRVHCDDCKRSFTSEKSYSVHYQRVHLGVKLQKRKRQTLKRPDEPVVCEICGRRCITMATLRYHQRIHTGERPFHCTECPKKFSVFQRLQIHLRTHTGESPYKCKHCPKAFKHKAALNRHDRVHTGAKPYTCSHCGKGFSQSNSMKLHVNTVHLKLPAPYRARRNKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -