Etag017059.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990084.1:9456589-9464962[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.58 34 5.2 0.3 3 23 105 125 103 125 0.96 2 19 0.32 19 6.0 0.0 2 23 129 151 128 151 0.94 3 19 0.017 1 10.0 0.1 1 21 411 431 411 432 0.93 4 19 0.0045 0.27 11.8 0.3 2 23 442 463 441 463 0.95 5 19 5.6 3.3e+02 2.1 0.5 1 23 479 502 479 502 0.77 6 19 0.041 2.4 8.8 6.2 1 23 511 534 511 534 0.94 7 19 1.9 1.2e+02 3.5 0.2 2 23 547 569 546 569 0.90 8 19 6 3.6e+02 2.0 0.4 8 23 585 601 577 601 0.93 9 19 1.2 70 4.2 0.7 3 23 612 633 611 633 0.89 10 19 8.1 4.8e+02 1.6 0.9 1 23 638 661 638 661 0.84 11 19 1.7e-05 0.00099 19.5 1.7 1 23 667 689 667 689 0.97 12 19 6.8e-06 0.00041 20.7 1.8 1 23 696 718 696 718 0.98 13 19 7.8e-05 0.0047 17.4 2.3 1 23 723 745 723 745 0.96 14 19 0.0012 0.07 13.7 2.3 1 23 751 773 751 773 0.98 15 19 5.2e-06 0.00031 21.1 1.4 1 23 779 801 779 801 0.98 16 19 0.00083 0.049 14.1 1.7 2 23 808 829 808 829 0.98 17 19 0.00033 0.02 15.4 0.8 2 23 837 859 836 859 0.97 18 19 6.6e-06 0.00039 20.7 0.3 1 23 864 886 864 886 0.98 19 19 0.0043 0.26 11.9 2.4 1 23 892 915 892 915 0.98
Sequence Information
- Coding Sequence
- ATGGCATCCGATGACTCGGACGACGAACCTTTGTCCGTGCTAGCGGCCGAAAAGAGAAATAATCCTGAAAATTTTGAAGAGGAATATAATGAAGACGAAGGCCCTAGAAAGCGGAAGTCGTTAACAATAAAAATAAACCGCAAGCTGAACATCATAACTTCGCCGCCTATAATAGATAGGCCTGCGGACGTTTGGTTGTACTTAAAAGATTTAAACCCGACCGGGCCCTACAAATGCCTTCTTTGTGCCGACTGGTTCATAAATCGCTCCAAAATGGTAGTGCACTATATACTCAATCACGGAAAAGACTTCTGTAGTATCTGCAGGTACCTTGTAGTTGACAGAGAAAGTTGGAAGCAGCACATCAAGTTCCACACACCGTGGCCTTGTTCTCAATGCGTGGAGAGCTTCCTCTCCGAAGCGGCATTAAGGCAACATCTCAGCTCCGTCCATGAGTTGGTCCATTGCCGTCTCTGCCACTTCAGATTGCCAGTTGGAGACCAGTACGACGATCATCTAGTCCAGAAACACAATGTCACCAATATCCAAAGCAAAGATGATGAATGTATATGGGAAGTGGTAACAAGTAAAATACCAAAGTTTAATTGCTTCCTCTGTTGCAAGACTGACAACCTGGCATCCACATTTTTCACCCACTACATGGGGTTTCATCACTTCACTCTGAAGTGTATCACCAACATTATATCAGGCACTGACACACCCTTCACTGTACACGGCGCAGAGGTCAGCTCAGAATTCATTGATGGCCAATTAAAAGGTCTCAGCGCTTTTGGATATGTAGATGCAGAGAAACCAGAGAGCTATCTAGAACTTTGCCAAAGAGAAATCACAGAATCACCAAAGATGATGACGGTGGAAATAAAAAAGGAATTACCTGAATTTGATGAACCGAAAGCGGAGGATGAATATTCAAATAAAGGTGACTCTGAGAACTATGATGAAATTCACAACTTTGAACCCCCAGAAGATTTTGATGTAACTCAGGTAGAGCTGGTAATACAACACAAAGGATACTTTGACTACATAAAACAAGTGATGGATGATATTTCAAAAAATGTATTGCCAGAGACCTCCGATATTGTTATCGAGAAACACAAAAATGAGATTCCATTAGATGCTAACTGTCCGTTATGTGATTGTAAATGCCTATCAGCTCAGACGTTCACAACTCACATGTACAAGATACACGGAATAAAGTCAGTGCCTGAATTTTTTTGTAGGATCTGTGCTACCACCTTTGAGACTGATTCAGAGTTGGAATCTCACATATTGAAAGAGTTGGGGGATTTTGAAGACTTGTGGATATGTCAATTTTGTGATGAAGAGTTTTCTAACAGGGTAGAGACGAGGAAGCACTTGGCATCACACTGGCAGTTGATAGAGTACGATAACTGTTTCAGTCCCCATTTAGGCTTTAAATGTAGATATTGCCCAACTCTATTCTGGAATGAAACTGATCGAGAATTGCACCAAGTTAGGGTCCACTACAGTAAAAACGCAGAGTACTTTTACAAATGCAACAAGTGCACCGAGAAATTTAGTGACAAGGTTTTCTTCGTGCACCACCATCTAGAGAGGCATTTGGATGAGAGTTCTCAAGTGGGCTCTTTCTTCCTGAAATGCCGCATGTGCTATGTCGTGTTTCCGACTATTGAGGAAATAAGAACCCACTTTGACAGTGAACACTCTCTAGCGAGGAAGTTGTACTGTACACTAGAACCCTGCAAATATAAACCGTTTAGCCAACGGAAGTCCTTCAAATTTCATATAAAGACAGTACATCTGTCCTCGCGTTCGGAGAAGCCGGTGGCGTGTCCGGTGTGCACGCGAGAGTTCGCCTCCGTGCGTTCGTGTAATGCCCACATAGCGCACGTGCACGGGCCCGGCAAGTTCAAGTGTAAGCTGTGCAAGGCCGCGCTGCATACCGTGGATGAGAGGAAGCTCCACTACCTGCTGGCGCACCCGGGCCGCCACCCGTTCGAGTGCAGCGAGTGCGGCAAGTCGTTCCAGTACAAGTCGTCGCTGTACATGCACAGGCAGGAGCACCAGCCCAACAAGCAGAGCTACACGTGCAACTACTGCTCCAAGGTTTTTGTGAAAAAGGACTCGTTCCGCGAGCACCTGCAGATCCACGAGGGCCCGCGGCACGCGTGCTCGTACTGCCCGATGCGCTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGCCGCCACACGGGCGAGCGGCCCTACGCCTGCCCGCACTGCAGCCGCACCTTCGCCGACAAGGGCGCCTGCACCTCGCACGCCAGAACACATTCGAAGGAGTCATCTTACGCTTGCCTTTACTGCGGTCAGACGTTCGTCCAGAAGTCTAAACTTACTTATCACGTCAGGAAACATACAGGGGAAAATTTGGAGACGTGTTCCATATGTGCGAAACTGTTTACAAGCGCCTGCTCGCTGCGGGAACACATGAAGATACACATGTGTAAGAAAGAATCAGTGAAGTGTCCTCTGTGTGATAAGAAATACCAAGACGAGCGATACATGTTGCGTCACCTGCGCACGTCGCACACCCGGACGCAGTACACGTGTCCCGTGTGCCAGAAGGTGGTCACCACCGCCAGCGGCCTGCGCCACCACGTCATCACGCACAGCCCGCTCAACACGTTCCGGTGCAAAATGTGCACAAAATCCTACGCCGTCAAACGCACCATCCTGTCACATTTGCGACGACGTCACAACCTGGGTGGCGACGTCAACCTCAAAGAGTACTTCACGCGCCTCGACCCGCGGCAGTGCAAGCTCGCCCTGGACGAAGCAACCATGACCGGGATATTCGGACCGCCCAAGAAGAAGTCTAGTGACGTCCTCATAAGCGACTTTGTGACGTATGTGAAGGATCCCAAGCTTCAGGACAAGTCGGAGGATAACCACGGAGTGGACAGCGAGAGTGAGGAAGAGGAGCCGGGCTCGCAGAAGGATGACGAGGAAGATGAGGAAATTAACGCCGAGTTGGAGCCGACCGACTTTGTTAGTATCAAGATTGAGCCTATCGATGAAGGCGATTAG
- Protein Sequence
- MASDDSDDEPLSVLAAEKRNNPENFEEEYNEDEGPRKRKSLTIKINRKLNIITSPPIIDRPADVWLYLKDLNPTGPYKCLLCADWFINRSKMVVHYILNHGKDFCSICRYLVVDRESWKQHIKFHTPWPCSQCVESFLSEAALRQHLSSVHELVHCRLCHFRLPVGDQYDDHLVQKHNVTNIQSKDDECIWEVVTSKIPKFNCFLCCKTDNLASTFFTHYMGFHHFTLKCITNIISGTDTPFTVHGAEVSSEFIDGQLKGLSAFGYVDAEKPESYLELCQREITESPKMMTVEIKKELPEFDEPKAEDEYSNKGDSENYDEIHNFEPPEDFDVTQVELVIQHKGYFDYIKQVMDDISKNVLPETSDIVIEKHKNEIPLDANCPLCDCKCLSAQTFTTHMYKIHGIKSVPEFFCRICATTFETDSELESHILKELGDFEDLWICQFCDEEFSNRVETRKHLASHWQLIEYDNCFSPHLGFKCRYCPTLFWNETDRELHQVRVHYSKNAEYFYKCNKCTEKFSDKVFFVHHHLERHLDESSQVGSFFLKCRMCYVVFPTIEEIRTHFDSEHSLARKLYCTLEPCKYKPFSQRKSFKFHIKTVHLSSRSEKPVACPVCTREFASVRSCNAHIAHVHGPGKFKCKLCKAALHTVDERKLHYLLAHPGRHPFECSECGKSFQYKSSLYMHRQEHQPNKQSYTCNYCSKVFVKKDSFREHLQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCSRTFADKGACTSHARTHSKESSYACLYCGQTFVQKSKLTYHVRKHTGENLETCSICAKLFTSACSLREHMKIHMCKKESVKCPLCDKKYQDERYMLRHLRTSHTRTQYTCPVCQKVVTTASGLRHHVITHSPLNTFRCKMCTKSYAVKRTILSHLRRRHNLGGDVNLKEYFTRLDPRQCKLALDEATMTGIFGPPKKKSSDVLISDFVTYVKDPKLQDKSEDNHGVDSESEEEEPGSQKDDEEDEEINAELEPTDFVSIKIEPIDEGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -