Etag007969.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990098.1:1142885-1146285[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3.8 2.3e+02 2.6 0.3 1 23 65 88 65 88 0.90 2 19 0.013 0.8 10.3 0.2 2 23 115 137 114 137 0.95 3 19 0.012 0.69 10.5 0.8 2 23 160 181 159 181 0.97 4 19 0.0064 0.38 11.3 1.2 1 23 185 207 185 207 0.98 5 19 0.023 1.4 9.6 4.9 1 23 212 235 212 235 0.96 6 19 0.028 1.7 9.3 0.3 2 23 243 265 242 265 0.95 7 19 6.7e-06 0.0004 20.7 0.6 1 23 272 295 272 295 0.98 8 19 6.3e-06 0.00038 20.8 0.7 2 23 302 323 301 323 0.97 9 19 6.8e-05 0.004 17.6 1.2 1 23 329 351 329 351 0.99 10 19 1.7 1e+02 3.7 0.2 1 16 357 372 357 373 0.81 11 19 0.00035 0.021 15.3 0.9 1 23 502 525 502 525 0.92 12 19 0.43 26 5.6 0.3 2 23 550 572 549 572 0.92 13 19 0.0026 0.15 12.6 0.6 1 23 620 642 620 642 0.98 14 19 0.02 1.2 9.8 4.2 1 23 647 670 647 670 0.94 15 19 0.27 16 6.2 2.2 2 23 676 698 676 698 0.93 16 19 0.0063 0.38 11.4 1.2 2 23 706 727 705 728 0.93 17 19 0.00077 0.046 14.2 1.8 1 23 734 756 734 756 0.97 18 19 1.6e-06 9.7e-05 22.6 1.0 1 23 762 784 762 784 0.99 19 19 0.0015 0.089 13.3 2.5 1 23 790 813 790 813 0.96
Sequence Information
- Coding Sequence
- ATGGCCACTGAACCCATACTGATAAAACCGATAGAATCAGAAATAGAAAACCCAATACTAAAAGCAGAAATTGAAGATTTGAACAAGAGAAGAGGAACGGGCGTAAAGGAACTGATCAAACATTTACATAATATGAGAACAGTTCTGTTGCATTCAAATGCTACACCGATTAGAAACCACAGCGGCATAGGTTATCTTTGTTCGTTTTGCTCAAACTATTATGACGCGCCGGCAGACCTGAAAACACATACCCTCGAAACACATTTAGAAGCGGAAATCAATAAATACATGGACGGCGCTTGCCCCAGCACTTACATAGTGAAGGTAGACATAACAGACCTGAAATGTACCCTTTGTGACAGCGAATTTGATGTGTTGGAACAACTGTTCAAACATTTGTCAGTTGAACATGGCCTAAAAATTCACAGTGATATAAAGAATCGATTAATACCGTTCAAGTTTGACGACGGAACGCTGAGATGTTGTGTCTGCGAACTTGCCTTCGAGGGATTCAAAGGTCTCAGAGAGCACATGAACACGCACTACAGGAATTTTGTTTGCAGGCAGTGCAACTTGCCGTTCATAACGGACAAGATGTTTCGCAGTCATCTGAATCGGCACAAGAAGGGCGCGTTCGAATGCCCCCACTGCTGCAAAACGTACGACACGAAGTCGAAGATGACCAACCACGTCAACTACGCCCACAAGGAGTCGAATCAAAGGAACAAGTGCCCTTATTGCGACGCGAAGTTCATCAGCTACCCGCGAAAACGTGTTCACATGAAGGAGGCGCACGACGTAGAGTATTTAGTCTACAAATGCAAGGCTTGCGACAAATCGTTCCCGAGCAATGCCAGCCTGAACATACACACCAAGCGGGTGCACCTCATGCAGAAGGACGTCGAATGCCTGATCTGTGATAGGAAGTTCTTCTCAGCACGGAATCTGAAGAGACACATGCTGAGTCATTCCGCCGAGAAGATGTTCAAGTGTAACATTTGCCTCAAATCGTACCAGTCGCCGAACACGCTGCGTGAGCACCGTCGTATACATAAGAATGATAGGCGGTTCAAATGCAGTGAGTGCAGCATGGCGTTCTTACAGAAGGCCACGCTGAAAGGTACATACATACAACAGGAACATGGGTACTATCGTACATATCCGACAACAGTTACCAAGAACTGGGATACGGGAAGTACAGACGTTAAAGTAACTCATGAATCGAGACCGATAAAGCATCTCGCCAGTCTCACCACGAAAAAAAAAACTTTGAACGATTTAGTAAAACTGGAAACGGTGGATGGTGAAACACCAGAAACTTCAGAGAATCTCAAAACTGCAAAAATACCGTGGAATGCACTGATGAATGGAGAACTAACTGTAAAGAAGAAGTGGAAGGCACCGAAAAATTTAAAGAGAGATCGCGAGAAAATTTCCGAAGAAATACTACAAGTGTTTCGCCTATCGAATGCCACCCCGTTCCAGTGTACCGGTAGCAAAGGATTCTTTTGCTACTATTGCAATAAGGGCTTCATGAATCCAGTAGACCTGAGGAAACACACGTTAGACATGCACGAATACACCACCACTCTCATAAAAGATACCGATATAGCCAGATTCTACATGAAAGTAGACATTACAGATTTACGCTGCTTAATATGTTCGAAAAACCTCGACGACTTAGAACAACTGGGGCAACATCTACACGAGGAACACGACAAAGGGCTCTTCTCAAATGTCAAGAACTACCTGGTACCGTTCAAGTTCAAGGGCGATAAGCTGGAGTGCTTCAAGTGTTGCATCAGATATTACAGTTTCAAGGCGCTCTTGGAACACATGAACCACCACTTTAGGAATTTTGTCTGCAACATATGCGACGCTAGTTTCCTACAGCGTACCGGTCTGTTATATCACAGGAAGACGCACCAAACTGGATCGTTTAAGTGCCAACACTGCGAGAAAGTCTACACGACTCTAACGAAGCAGAAGTCACACGAGAAACAGGTCCACGGCATCGTCCTTAACAGATGCGGCCATTGCCCCGCCACGTTCAAGGAATACACGCATAAGGTCAAACATTTGTTGGAAGCTCACGGCATAGCCAAGAAGAGGCTGGAGTGTGGCGCTTGCGACAGAACGTTCACGGCCTACCAGAGCTTATCTATTCACACGAGACGGCATCACCTCATGGAGAGGCGGCACAGATGCGAGATCTGCGACGACATGTTCTACACGTTGACCGAGTTGAAGAAGCATCTGATCAAGCATACCGGCGAGAAGAGGTACAAGTGTGACGTGTGCTTGAAGGCGTACTCGCGGAAGAGCACGCTGAAGGAGCATCTGAGGATACACGCGGACGATCGCAGGTTCAAGTGCGAGCACTGCGGCATGGCGTTCGTGCAGCGCTGCAGCTGGCGGGGGCACGTGCGCGCCAAGCACGGGGAACAAGTGTAG
- Protein Sequence
- MATEPILIKPIESEIENPILKAEIEDLNKRRGTGVKELIKHLHNMRTVLLHSNATPIRNHSGIGYLCSFCSNYYDAPADLKTHTLETHLEAEINKYMDGACPSTYIVKVDITDLKCTLCDSEFDVLEQLFKHLSVEHGLKIHSDIKNRLIPFKFDDGTLRCCVCELAFEGFKGLREHMNTHYRNFVCRQCNLPFITDKMFRSHLNRHKKGAFECPHCCKTYDTKSKMTNHVNYAHKESNQRNKCPYCDAKFISYPRKRVHMKEAHDVEYLVYKCKACDKSFPSNASLNIHTKRVHLMQKDVECLICDRKFFSARNLKRHMLSHSAEKMFKCNICLKSYQSPNTLREHRRIHKNDRRFKCSECSMAFLQKATLKGTYIQQEHGYYRTYPTTVTKNWDTGSTDVKVTHESRPIKHLASLTTKKKTLNDLVKLETVDGETPETSENLKTAKIPWNALMNGELTVKKKWKAPKNLKRDREKISEEILQVFRLSNATPFQCTGSKGFFCYYCNKGFMNPVDLRKHTLDMHEYTTTLIKDTDIARFYMKVDITDLRCLICSKNLDDLEQLGQHLHEEHDKGLFSNVKNYLVPFKFKGDKLECFKCCIRYYSFKALLEHMNHHFRNFVCNICDASFLQRTGLLYHRKTHQTGSFKCQHCEKVYTTLTKQKSHEKQVHGIVLNRCGHCPATFKEYTHKVKHLLEAHGIAKKRLECGACDRTFTAYQSLSIHTRRHHLMERRHRCEICDDMFYTLTELKKHLIKHTGEKRYKCDVCLKAYSRKSTLKEHLRIHADDRRFKCEHCGMAFVQRCSWRGHVRAKHGEQV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -