Etag013340.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- Znf711
- Assembly
- GCA_905147235.1
- Location
- LR990093.1:6526849-6539350[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 5.3e-06 0.00032 21.0 1.2 1 23 296 318 296 318 0.99 2 11 0.016 0.96 10.1 4.2 1 21 325 345 325 347 0.94 3 11 0.057 3.4 8.4 0.3 1 23 351 374 351 374 0.92 4 11 1.2e-06 7.2e-05 23.1 2.3 1 23 380 403 380 403 0.93 5 11 8.9e-05 0.0053 17.2 0.9 2 23 410 432 409 432 0.96 6 11 0.00034 0.02 15.3 0.1 1 23 445 467 445 467 0.95 7 11 4.2e-05 0.0025 18.2 0.3 1 20 473 492 473 494 0.95 8 11 0.00013 0.0078 16.7 1.3 3 23 508 529 506 529 0.95 9 11 5.9e-05 0.0035 17.7 0.6 1 23 535 558 535 558 0.96 10 11 2.2e-07 1.3e-05 25.4 0.5 1 23 567 589 567 589 0.98 11 11 0.042 2.5 8.8 0.1 1 23 595 618 595 618 0.95
Sequence Information
- Coding Sequence
- ATGGAAATTAACAAGTTTAGTTATTGCTTGGGATGTTTGTGTTCCAATAGTGACTGTACTCTTCAAGATTACAAGATAACCGGTGATCCCCTGAAAGCGATTTTACAGGTAGATGCCGTACAACTCTGTTACATCTGTAAACGTCTAGCACAAAAAATGGAAGCTTTCCTGCGTAATGCTCGGAATAATCAAATATTTTTAGAGAATCTACATAATGTATCAGAATCAGTTGTTCAAACAGTCAGATCAAAACTCATATCCTTGACGAGCACAACTCTAGATAAAATTGAAGTTAGTAGCAATGATCAGGAACCAACCCCAATTTCTGAAACCGGATCTCAGTTCAAAGTTGTAAGTCTAGGGTCGACTCAAGATTCTGAATATGTTGCTCGGGTCAAAGAAGTGGACATCAAGCTTGAGTTGGAGCTTAAGCATGAGAATGGTTTCTTGGACCACTTGGAGGGTGAATTTGTTGATGATGACTTTCAAGACTCAGCCGTAAAAGAAGAAGATGACTTCCCACTAAAGGATCTGTTGTGTGAAAAGAAATTAGAGAATGGTCATAATTTACGATTGAAAAAATCTTTAAGAAGAACTAAAGTAGACAAGAAGAGAAGAAAACACCATAGAAGTAAAAAAGCAGAGAATAATGAAGAAAATGAAAAAGAAGATTTCCCATTAAGTGATTTACTGAAAAAAGAGTTTGTAGAAGAGTTGGGAACAGAAGAATTGAGTGTAGCAGATACACAGAAGGACAACGTTAAAAAGCGTAAACAATATAGTTTAAAGAAGGATCTGTACACGGAAGTTGTGTACATAACGAGAGAGCAGTGCTCGGAAGAGAGGGCCCGCTTGGCTCAGGACAAGAAGTACCAGAGCGCGCCTTACAAGTGCAGCGACTGCGTCAAGGCGTTCGTCTTCCAGGAGAGCTACGAGACGCACATGAGGCGTCACAGTGCGGCAATGGGTGATTACGAATGCGACATCTGCAAACAGAGAACCAGCTCCAAGGAGAAGTTGTTACGTCACAAGAAGTGCCACGAGATGCGATACAAATGCACGGAGTGTGGCCTGACTCGCATCAACTGGCTCACCATACGGGAACACTACAATGCGTTCCATTTGAAGTTGCAGTCCTATGTGTGCACACACTGCCCCAAGACCTTCTCACGCCAGGTGTCGCTACGGAAGCACGTGGCGTACCGCCACAAGACCAGCGCCCGCGTCAAGTGCCAGCACTGTCAGAAGACATACGCCAACAAGGAGGTGCTGAAAGCGCATATCATCGTACGGCATCCCAAGGAGGTGTCGGGAGGGGAGGGCCTGATGCGCTACGCGTGCGCGGAGTGCGGCGCTGCCTTCAAAGCTCCCTCGCAGCTGCGCAACCACAGCACCAAGCACTCCCGCGCCAGGGACTACTACTGCGTCGAGTGCGACAAAAGCTTCAAAACGGAGGCGGCGTTCAAACGCCACGTTAGTCTCACAGCACCCCATGTTAACTACATGGAACTGCCATTGGCGTGTGGCCACTGTGACAAGCGTTTCGCCATCCGACGCGACTTGCAGCGACACACCAACCGGGTTCACCTCAATATAAGACCGTTCCAGTGTGACAAATGTGATCGGGCATACGTCAATAACTGGTCCCTGAACGAGCATAAGAGGTTCGTGCACGAGGGGGAGAAACGTCCGCTCAAATATCCTTGCTCGATGTGCGACAAAGTGTTCGACCGCAACCAAACGCTGAAAGCGCACGTGCGCACTCACACCGGCGAGCGGCCCTTCCAGTGCGCGCGCTGTCCCGCACGCTTCGCGCAGAGCAGTGCGAGGGGAACGCACGTGCGCCTCGTGCATCTGAGATTGCCGCGGGCCAGGCATCACACGCCGCTGTAA
- Protein Sequence
- MEINKFSYCLGCLCSNSDCTLQDYKITGDPLKAILQVDAVQLCYICKRLAQKMEAFLRNARNNQIFLENLHNVSESVVQTVRSKLISLTSTTLDKIEVSSNDQEPTPISETGSQFKVVSLGSTQDSEYVARVKEVDIKLELELKHENGFLDHLEGEFVDDDFQDSAVKEEDDFPLKDLLCEKKLENGHNLRLKKSLRRTKVDKKRRKHHRSKKAENNEENEKEDFPLSDLLKKEFVEELGTEELSVADTQKDNVKKRKQYSLKKDLYTEVVYITREQCSEERARLAQDKKYQSAPYKCSDCVKAFVFQESYETHMRRHSAAMGDYECDICKQRTSSKEKLLRHKKCHEMRYKCTECGLTRINWLTIREHYNAFHLKLQSYVCTHCPKTFSRQVSLRKHVAYRHKTSARVKCQHCQKTYANKEVLKAHIIVRHPKEVSGGEGLMRYACAECGAAFKAPSQLRNHSTKHSRARDYYCVECDKSFKTEAAFKRHVSLTAPHVNYMELPLACGHCDKRFAIRRDLQRHTNRVHLNIRPFQCDKCDRAYVNNWSLNEHKRFVHEGEKRPLKYPCSMCDKVFDRNQTLKAHVRTHTGERPFQCARCPARFAQSSARGTHVRLVHLRLPRARHHTPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -