Etag008495.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990098.1:5219870-5226483[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.00046 0.027 14.9 4.9 2 21 165 184 164 185 0.94 2 29 4.8 2.9e+02 2.3 0.3 3 23 193 213 192 213 0.89 3 29 1.3 80 4.0 1.7 1 23 218 241 218 241 0.93 4 29 0.00032 0.019 15.4 2.3 2 23 247 268 246 268 0.95 5 29 0.01 0.6 10.7 1.1 3 22 273 292 272 292 0.94 6 29 0.0072 0.43 11.2 0.3 2 23 336 358 335 358 0.94 7 29 0.0043 0.26 11.9 0.8 1 23 391 413 391 413 0.98 8 29 0.0019 0.11 13.0 1.4 1 23 419 442 419 442 0.96 9 29 0.0042 0.25 11.9 0.5 1 23 451 474 451 474 0.96 10 29 0.012 0.72 10.5 3.3 1 21 592 612 592 613 0.93 11 29 0.91 54 4.6 0.3 2 23 618 639 618 639 0.93 12 29 0.043 2.6 8.7 3.3 1 23 644 667 644 667 0.93 13 29 0.033 1.9 9.1 0.0 1 23 672 694 672 694 0.96 14 29 9.4 5.6e+02 1.4 4.5 1 21 697 717 697 718 0.92 15 29 3.9e-06 0.00023 21.5 0.4 1 23 730 753 730 753 0.95 16 29 0.00034 0.02 15.3 3.1 2 23 760 781 759 781 0.96 17 29 9.4 5.6e+02 1.4 1.0 5 23 791 809 789 809 0.96 18 29 0.26 15 6.3 0.6 1 23 815 838 815 838 0.95 19 29 0.15 8.6 7.1 2.1 1 20 846 865 846 867 0.93 20 29 5.4e-05 0.0032 17.9 0.6 2 21 970 989 969 990 0.93 21 29 5.1 3e+02 2.2 0.1 3 23 997 1018 996 1018 0.94 22 29 0.0015 0.092 13.3 0.0 2 23 1024 1046 1023 1046 0.94 23 29 2.9e-05 0.0017 18.7 0.1 2 23 1052 1073 1051 1073 0.96 24 29 0.66 40 5.0 2.7 2 21 1077 1096 1077 1097 0.93 25 29 0.00025 0.015 15.8 1.7 1 23 1123 1146 1123 1146 0.95 26 29 0.00086 0.051 14.1 0.4 1 23 1152 1174 1152 1174 0.92 27 29 0.17 9.9 6.9 0.1 1 23 1180 1202 1180 1202 0.97 28 29 0.0023 0.14 12.7 0.2 1 23 1208 1231 1208 1231 0.94 29 29 0.00089 0.053 14.0 1.6 2 23 1238 1260 1237 1260 0.96
Sequence Information
- Coding Sequence
- ATGTCGAGGGAAGTGAATATAAAAGCTCTAGTGTCTCATGTAGTCAAAGGAGATGGGATCGACAAATGTCGAATTTGCATGGGAGATACGTCTGATGGGCAGGTCTACTTGGGCGATACGGTGATGATGGATGGCGATAAGCCTGTAACTCTCTCCGAGATCCTGGAAGCGATAACAGGAGTTGAGGTGCAGCCGGGAAAGGACCTGCCCCCAGGCCTCTGCTCCGCCTGCTCCACGTCAGCCCTGAACGCAGCGCACTTCCGGACCCACTGCAGACATGCCTCTGAACAGTGGGACACAACCCTGCAACTCTTAGCCAACCTGCAGTCACTCCCTACTGACGAGATGGCCAAGTCAATATTGATAATTTTAGGACAAAACGAAATGACTATCGTCAATAGATACCAAAGTGTTCCTGAAAAATCTCCTTTGAAAATACAAAAAAGTACTTCAAAGGTGAAGTTTAAGAGGGAGAGAGTAGCAAAGGGCTGTCAGTGTTCGGAGTGCGGAAAAAAGTTCAAATATCCCCAACACTTACATCAGCATTTAAAGGAATCGACAGACTTTAAACGAGCATGCCACATCTGTGCTAGAATCATGACGAGAGATGAACTAGTGTCCCATATGAAAGACGTACACGGCAGAAAGCCTTACGACTGTAAGAAGTGCCCAGCCTTGCTACATTCCTACAGCCAGTTCAAGAAACATGTGGTCAAAGCTCATTCGAAAGGCTCCTGTTCTTGTGGGGACTGTGGGCGGAGTTTCAGGTCCGCTCAAGGGTTCCACGCCCACCAGTCAGTGCACGGCCTGAAGATATGTCCAGGTTGCGATAGACAGTTCCGCAACCAAACCTGCTATTTATACCACGTGAGAAAATGCTGTAACCTCGACAGCAGCCGAAACGAAACCCACCGAACGAAGCACAAAGTGTTCGTCAAAGTACCGAACCGTTCGAGCGACAAGCAAATCAAAGTCGGACTACGGGGCAGCGCGTACAAAGAGTGCATTTGCGATTACTGCGGCAAGAAATACGCGGGGAAGAAGTTCGTGGCCGCTCACATTCAGATCGTCCACACGAAGAACACCCATAGACCGTGTGTGTATTGTGGGAAGTTACTAGCGGCGGCCCACATGACTGAGCACGTGAAGAAACACGTGACGGTCTCCAAGTTCACGTGTGAACACTGCGGTGTGGTGTTGCGTACCAAACTCGGCTACGTGCAGCATTTGAGACTTCATACGGGCGAGAAGCCTTACAAATGTCAGTACTGCGGGGAAACCTTCTCAGCGTCCTCTAGAAGATCCGAACATGTACGAAAGAGCCACAAAGCGTCGGAGATTGAGCTGAAGCATGCTTGCGAGCTCTGCCCGGCGAGGTTCCGCCTTCCATACAGACTGAGGAAGCATGTGATGACGGTACATAACGAGTCAGTTGAACCGGAACTACAGTTTAAGTGTGATGTTTGGGAGGAGCCATCGTTGCCGCGAGGAATATGCCGCGAATGCCTCAAAGCGACCAAAGCTGCCCTCGCCTGGAGACAGCTGGTCAGAGAGGCAGCAAGACATTGGAAGACCGCAAGCGCCATGCTCTCCCACATCGACAAACCGAGCCCCTCAGACGGCGCTTACTATATCTGCTACGGTGACAAAATTACCGTCCAAAAAGACCAGGCAAAGACGATAGCTGACACGAAACACGCAGCGAATCGGCTCAATCACACCTACCACTACAATTCGGAGAAGACGAGGAAAAGAAGGAAGAAATTAGGCACCTTCCAGTGTTGCGACTGCGACAAGAAGTTCCCGTCGCTCATCCACTTGGACCAGCACTTCAAATCCTCAATGAAACGCGTTTGCACGAAATGCGCTTTGGTCGTAAGGAAGGAGAAGCTAGCGAAGCATCTGCAGAAGGTTCACAACAAAACGGTGTTTCCCTGCAACTTGTGCCATCAGCTTTTTGACGAACAGAAGAATTTAGTTCGGCACACCCATTTACAACACGGTCCTCAAGCGTTCAATTGTAAGGTTTGTGGAGCCGGCTTCCCCATACTTCGAGGGTTGAGAGCTCACGAATACACCCACTCGTTGTTCAACTGCCTTGCCTGCAATGCGACCTTTGAGAACCGAAAATGTTACAAACATCACAAGAACCAGTGTTCCGGACAAAAGCATGTACAAGAGAGCGTGTACGAATGCGACGATTGCGGGAAAAAATACACGAATAAACCGTCTTTGAGGATCCATATTATCCAGAAGCATGTGAACGTTTTACCGTGCGTTTGCACCATCTGTGGCAAGCGCACATCGAACTCAAGTCACGCGAAAGCCCACGAAATGACGCACATGGCCGAACGGAAAGTATACGAGTGCCACTGTGGCGCAAAACTGAGGACCCAAGTCGGATTCGACATGCATAAAAGGATCCATACGGGTGAAAAGCCGTTCGAATGTTCCGAGTGTGGGGACCGGTTTATATCGACGTCGAGAAGACTAGACCACATCATGAGGAAACATAGGAGTATAAAGGAAATGAGGCATTGCTGTACAAGCTGCGGTGCGAGGTTCCTGAGGCCTTTCGAGCTGAGGAAACATATGGTAAAAGAAGAAACGTCATTCCCTCAAGGATTGTGCATAGACTGTAGTTCGACAGCGATATCTGCTTACGACTTCAGACTATTCGTTCGCAAGTCTTGCATTTTATGGACCAACTGCCTCAGCTCGCTAACAGTGCTGCCAGCACCTGAGACCTCGAAATCCTTATACGCGGTCATGAGAGATGATTTATCGTTGCAAAACACGAATGAGTTCAATGGTGACGCCAAAGCGCTGCTAGATATCCTGTTGAATAGGTTAAAGAAACGGAAAAAGGCGGTCAAGAGGCCGAGAGGACGTACAGGACCGTCCTGCTCGTGCGGAGACTGCGGGAAGACTTTCCCGAGCCCGTATTACCTCAACTTGCATCTCAAGAACAGCGGCCAGAAGGAAGCCTGCTGGTTCTGCGGCGCCGTCCTCATCAGAGGCGAGGAGATGAAGAGTCATCTCTACAAGAAACACTACGTCGAAGCGATCTCCTGCCCGGACTGTCCGATGCTTTTTACTACGGAAATAGACCTCAAAATACACATAAAAGACAGCCACAAGCCAGGTGCGCTGACGTGTGGCGACTGTGGACGGACCTTCCCGAGGCAGGCGTCGTTCGAAGCGCATTCCCAAATGCACGCTGTCAGAACCTGTCGCTCCTGCGGGGCTCAGTTCACGAACCGCGGCTGCTATAGGGAGCACAGGAAAAAATGTGAGCCGGAAGCGAAGCCAGACATAAACTTAGTGCCCAGAAGCAAGCGTTCCAACGTCCGCGACCCGGCGACCTTCACCTGCGACTACTGCTCGAAAACCTACCACTCGCGGCCTCAACTTAAGAACCACATCATATGGATCCACATGGACGTCCGCCCGCACCAATGTCAGGTGTGCGGGAAGCGATTCTATACACCAGCAAGGCTAGCGGAACACTCCGTCGTCCACACGAGGGTGAGGAACTTCGAGTGCGACATTTGTGGCGCGAAGCTCGTCTCCAGAATGGCGGCCGTGTACCACAGACGGAGACACACGGGGGAGAGGCCGTACGAATGCGAGGATTGCGGTGAAAGTTTCATATCGGCGTCTCGGAGGTCGGACCACGCGAAACGGAGGCACGGCAAGGGTATTAGGATGCAGTGCATGCAGTGTTCGGCGAATTTCGTCAGGTCCCACGAGCTGAGGAAACACATGGAGAAGGCACATAGGGCGGCGGACAACGCGCACTGTTTGTTGGAGGTGAAAGGATAA
- Protein Sequence
- MSREVNIKALVSHVVKGDGIDKCRICMGDTSDGQVYLGDTVMMDGDKPVTLSEILEAITGVEVQPGKDLPPGLCSACSTSALNAAHFRTHCRHASEQWDTTLQLLANLQSLPTDEMAKSILIILGQNEMTIVNRYQSVPEKSPLKIQKSTSKVKFKRERVAKGCQCSECGKKFKYPQHLHQHLKESTDFKRACHICARIMTRDELVSHMKDVHGRKPYDCKKCPALLHSYSQFKKHVVKAHSKGSCSCGDCGRSFRSAQGFHAHQSVHGLKICPGCDRQFRNQTCYLYHVRKCCNLDSSRNETHRTKHKVFVKVPNRSSDKQIKVGLRGSAYKECICDYCGKKYAGKKFVAAHIQIVHTKNTHRPCVYCGKLLAAAHMTEHVKKHVTVSKFTCEHCGVVLRTKLGYVQHLRLHTGEKPYKCQYCGETFSASSRRSEHVRKSHKASEIELKHACELCPARFRLPYRLRKHVMTVHNESVEPELQFKCDVWEEPSLPRGICRECLKATKAALAWRQLVREAARHWKTASAMLSHIDKPSPSDGAYYICYGDKITVQKDQAKTIADTKHAANRLNHTYHYNSEKTRKRRKKLGTFQCCDCDKKFPSLIHLDQHFKSSMKRVCTKCALVVRKEKLAKHLQKVHNKTVFPCNLCHQLFDEQKNLVRHTHLQHGPQAFNCKVCGAGFPILRGLRAHEYTHSLFNCLACNATFENRKCYKHHKNQCSGQKHVQESVYECDDCGKKYTNKPSLRIHIIQKHVNVLPCVCTICGKRTSNSSHAKAHEMTHMAERKVYECHCGAKLRTQVGFDMHKRIHTGEKPFECSECGDRFISTSRRLDHIMRKHRSIKEMRHCCTSCGARFLRPFELRKHMVKEETSFPQGLCIDCSSTAISAYDFRLFVRKSCILWTNCLSSLTVLPAPETSKSLYAVMRDDLSLQNTNEFNGDAKALLDILLNRLKKRKKAVKRPRGRTGPSCSCGDCGKTFPSPYYLNLHLKNSGQKEACWFCGAVLIRGEEMKSHLYKKHYVEAISCPDCPMLFTTEIDLKIHIKDSHKPGALTCGDCGRTFPRQASFEAHSQMHAVRTCRSCGAQFTNRGCYREHRKKCEPEAKPDINLVPRSKRSNVRDPATFTCDYCSKTYHSRPQLKNHIIWIHMDVRPHQCQVCGKRFYTPARLAEHSVVHTRVRNFECDICGAKLVSRMAAVYHRRRHTGERPYECEDCGESFISASRRSDHAKRRHGKGIRMQCMQCSANFVRSHELRKHMEKAHRAADNAHCLLEVKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -