Etag007932.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990098.1:1042081-1047161[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.016 0.97 10.1 1.1 6 23 16 33 12 34 0.90 2 30 0.00028 0.017 15.6 0.5 1 23 39 61 39 61 0.98 3 30 0.41 24 5.7 1.6 9 23 102 116 101 117 0.91 4 30 0.012 0.69 10.5 0.5 1 23 122 145 122 145 0.95 5 30 0.11 6.3 7.5 3.6 2 23 148 170 148 170 0.95 6 30 0.0075 0.45 11.1 0.1 3 22 175 194 174 194 0.95 7 30 0.032 1.9 9.1 2.6 1 23 247 270 247 270 0.96 8 30 2.3 1.4e+02 3.3 0.0 3 23 299 320 297 320 0.93 9 30 0.033 2 9.1 0.3 2 23 343 365 342 365 0.95 10 30 6.2e-05 0.0037 17.7 0.7 2 23 371 393 370 393 0.92 11 30 0.018 1 10.0 3.6 2 23 398 420 397 420 0.93 12 30 0.0017 0.1 13.1 2.7 1 23 425 448 425 448 0.95 13 30 2.3e-05 0.0014 19.0 3.2 1 23 452 475 452 475 0.97 14 30 0.0082 0.49 11.0 1.6 2 23 482 503 481 503 0.96 15 30 0.29 17 6.1 0.1 1 10 509 518 509 528 0.91 16 30 0.016 0.97 10.1 1.1 6 23 539 556 535 557 0.90 17 30 0.00028 0.017 15.6 0.5 1 23 562 584 562 584 0.98 18 30 0.41 24 5.7 1.6 9 23 625 639 624 640 0.91 19 30 0.012 0.69 10.5 0.5 1 23 645 668 645 668 0.95 20 30 0.11 6.3 7.5 3.6 2 23 671 693 671 693 0.95 21 30 0.0075 0.45 11.1 0.1 3 22 698 717 697 717 0.95 22 30 0.0016 0.096 13.2 1.3 1 23 770 793 770 793 0.97 23 30 2.2 1.3e+02 3.4 0.0 3 23 822 843 820 843 0.93 24 30 0.033 2 9.1 0.3 2 23 866 888 865 888 0.95 25 30 6.2e-05 0.0037 17.7 0.7 2 23 894 916 893 916 0.92 26 30 0.016 0.95 10.1 3.5 2 23 921 943 920 943 0.93 27 30 0.0033 0.2 12.2 2.0 1 23 948 971 948 971 0.95 28 30 9.2e-05 0.0055 17.1 2.4 1 23 975 998 975 998 0.97 29 30 0.071 4.3 8.0 1.6 2 23 1005 1026 1004 1026 0.95 30 30 0.00017 0.01 16.3 0.8 1 23 1032 1054 1032 1054 0.95
Sequence Information
- Coding Sequence
- ATGATTTCGGTCCACACGAAGGAAAAGGACGTCGCTTGCGCTCCTTGCGATCAGAAGTTCTATAACAATTACACGCTGAAGCTGCACCTGATCAAACATCACGGTGACAGGAGGTTCACGTGTGAGGTTTGTGGAGAATACTTTCTCCGGCAGAGGAACTTGGACCAACACATGGAGACGCATAAGAAGGAAGGATACGAAGAATACGAGAAAATCGAGTACATTGAAGAGGAGTTGGAGGGAGAGGGAGATGTGGAAGAGATAGAGATTGAGGAGGTAGAAGCTGGGGATGTAGGAATGGAAGTGTTTTATAAACAAAGCGATTTAATAACCCATATACGACACCATCACAAGCAAGAGGGCTATCCGTGCGACGAATGCGTTGAAACTTTCCAGTCTAAAATTTTATTGGACAGACATAAAAACAACTTCCATTTCAGACAGTGCAAAACTTGTCATCTCAAAGTCGAGTCCTACAGTCTTTTAAAGAAGCACAAGAAATTGGAGCATCCCAACAATAACTGTCCGAATTGCGCAAAGGAATATAAGTCGAGACAAGGTCTGGTGAGGCACTTGCGTGTTTGTAAACCCAAAGACGAGAAAAAGGACGAATCGGTACTCGATCCTTTAGAGGTGACGCTCGCGCCTAAAGAAAAGGAAATGCTTACGCAAAAACGACATAACATCGTTACGGTCCTCAACATGTCAACCGCGATACCTTTCAAGTTCATCGCCAAATTCTCCTGCTTTCACTGCTCGAAAAAGTTCACCGAAATCGACGAAGTGAGAGAGCACACGACGACCGAACACCCAGTGTGCGACATGAAATCGAAATGCATAATGGGATGCAAGGGCGACCGCGCAACAGTCAAAGTCGACGTGAACGCGCTAGCGTGTAAAGTGTGTCGGAAACCCGCTGAAAACTTGGAGGTATTGATCGAGCATCTCATCAGCGAGCACAAGGTTAGCTACGACAAGACAGTGACCGGTTGCTTCGAGCCGTTCAACATCATCAAGGACAACATCCCGTGCCCGCATTGCGCGACCGAGTTCAGATACTTCAGGACCCTCGTCGGACACATCAACTCCGTCCACAGCAACAACAAATGCATCTGTGACTTCTGCGGTAGGGCCTTCAGTAACGCGAACAACTTGAAAGTCCACGTCAGTAACGTTCACACCGGGTCTTGCGACTGCGATGTCTGCGGGCTGAAGTTCAAGAACCAGCTGTGTTTGGCCCGACACAAGGCGAAGCTCCACGACGTTAAGGACTTCAAATGCCCGAAGTGTCCCGAGCAGTTCCAGTCGCAGTACCACAAGCAGAAGCATCTGATCCAGGTCCACGATATAGGCCACAAGTGCGGCTACTGCGGGCGGATGTTCACGAGGAATTCGTTCATGAAGGACCACGTTAGGAGGGTCCATTTGAAAGAGAAGGACGTGACGTGCTCGCTCTGTGCGGAGAGGTTCTTCGATAAGCACCTGCTGAAGCTCCATATGGTGAAGCACTGCGGGGACAGGCGGTTCGCGTGCTCCGTGTGCGGAAAGACGTTCCTCAGGCGGAATGAACAGATTTCGGTCCACACGAAGGAAAAGGACGTCGCTTGCGCTCCTTGCGATCAGAAGTTCTATAACAATTACACGCTGAAGCTGCACCTGATCAAACATCACGGTGACAGGAGGTTCACGTGTGAGGTTTGTGGAGAATACTTTCTCCGGCAGAGGAACTTGGACCAACACATGGAGACGCATAAGAAGGAAGGATACGAAGAATACGAGGAAATCGAGTACATTGAAGAGGAGTTGGAGGGAGAGGGAGATGTGGAAGAGATAGAGATTGAGGAGGTAGAAGCTGGGGATGTAGGAATGGAAGTGTTTTATAAACAAAGCGATTTAATAACCCATATACGACACCATCACAAGCAAGAGGGCTATCCGTGCGACGAATGCGTTGAAACTTTCCAGTCTAAAATTTTATTGGACAGACATAAAAACAACTTCCATTTCAGACAGTGCAAAACTTGTCATCTTAAAGTCGAGTCCTACAGTCTTTTAAAGAAGCACAAGAAATTGGAGCATCTTAACAATAACTGTCCGAATTGCGCAAAGGAATATAAGTCGAGACAAGGTCTGGTGAGACACTTGCGTGTTTGTAAACCCAAAGACGAGAAAAAGGACGAAACGGTACTCGATCCTATAGAGGTGACGCTCGCGCCTAAAGAAAAGAAAATGCTTACGCAAAAACGACAAAACATCGTGACGGTCCTCAACATGTCAACAGCGATACCTTTCAAGTTCATCGCCACATTCTCCTGCTTTTACTGCTCGAAAAAGTTCACCGAAATCGACGCATTGAGGGAGCACACGACGACCGAACACCCAGTGTGCGACATGAGATCGAAATGCATAATGGGATGCAAGGGCGACCGCGCAACAGTCAAAGTCGACGTGAACGCGCTAGCGTGTAAAGTGTGTCGGAAACCCGCTGAAAATTTGGAGGTTTTGATGGAGCATCTCATCAGCGAGCACAAGGCCAGCTACGACAAGACAGTGACCGGTTGCTTCGAGCCGTTCAACATCATCAAGGACAACATCCCTTGCCCGCATTGCGCGACCGAGTTCAGATACTTCAGGACCCTCGTCGGACACATCAACTCCGTCCACAGCAACAACAAATGCATCTGTGACTTCTGCGGTAGGGCCTTCAGTAACGCGAACAACTTGAAAGTCCACGTCAGTAACATTCACACCGGGTCTTGCGACTGCGATGTCTGCGGGCTAAAGTTCAAGAACCAGCTGTGTTTGGCCCGACACAAGGCGAGGCTCCACGAGGTCAAGGACTTCAAATGCCCGAAATGTCCCGAGCAGTTCCAGTCGGAGTACCACAAGCAAAGGCATCTGATCCAGGTCCACGATATAGGCCACAAGTGCGGCTCCTGCGGGCGGGTGTTCACGAGGAATTCGTTCATGAAGGACCACGTTAGAAGGATACATTTGAAAGAGAAGGACGTGACGTGCTCGCTCTGTGGGGGCAAGTTCTTCAACAAGCACGTGCTGAAGCTGCACTTGGTGAAGCACAGCGGGGAAAGGCGATTTGCGTGCGCCGTGTGCGGGAAGAAGTTTCTCAGACGGAGTCACTTGGTTCGCCACATAGACCTGCACAGGAAGTATGCACATCTGCAGAGTATAAAGGCCTGA
- Protein Sequence
- MISVHTKEKDVACAPCDQKFYNNYTLKLHLIKHHGDRRFTCEVCGEYFLRQRNLDQHMETHKKEGYEEYEKIEYIEEELEGEGDVEEIEIEEVEAGDVGMEVFYKQSDLITHIRHHHKQEGYPCDECVETFQSKILLDRHKNNFHFRQCKTCHLKVESYSLLKKHKKLEHPNNNCPNCAKEYKSRQGLVRHLRVCKPKDEKKDESVLDPLEVTLAPKEKEMLTQKRHNIVTVLNMSTAIPFKFIAKFSCFHCSKKFTEIDEVREHTTTEHPVCDMKSKCIMGCKGDRATVKVDVNALACKVCRKPAENLEVLIEHLISEHKVSYDKTVTGCFEPFNIIKDNIPCPHCATEFRYFRTLVGHINSVHSNNKCICDFCGRAFSNANNLKVHVSNVHTGSCDCDVCGLKFKNQLCLARHKAKLHDVKDFKCPKCPEQFQSQYHKQKHLIQVHDIGHKCGYCGRMFTRNSFMKDHVRRVHLKEKDVTCSLCAERFFDKHLLKLHMVKHCGDRRFACSVCGKTFLRRNEQISVHTKEKDVACAPCDQKFYNNYTLKLHLIKHHGDRRFTCEVCGEYFLRQRNLDQHMETHKKEGYEEYEEIEYIEEELEGEGDVEEIEIEEVEAGDVGMEVFYKQSDLITHIRHHHKQEGYPCDECVETFQSKILLDRHKNNFHFRQCKTCHLKVESYSLLKKHKKLEHLNNNCPNCAKEYKSRQGLVRHLRVCKPKDEKKDETVLDPIEVTLAPKEKKMLTQKRQNIVTVLNMSTAIPFKFIATFSCFYCSKKFTEIDALREHTTTEHPVCDMRSKCIMGCKGDRATVKVDVNALACKVCRKPAENLEVLMEHLISEHKASYDKTVTGCFEPFNIIKDNIPCPHCATEFRYFRTLVGHINSVHSNNKCICDFCGRAFSNANNLKVHVSNIHTGSCDCDVCGLKFKNQLCLARHKARLHEVKDFKCPKCPEQFQSEYHKQRHLIQVHDIGHKCGSCGRVFTRNSFMKDHVRRIHLKEKDVTCSLCGGKFFNKHVLKLHLVKHSGERRFACAVCGKKFLRRSHLVRHIDLHRKYAHLQSIKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -