Etag012128.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990082.1:3816217-3831754[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.00027 0.016 15.6 1.7 1 23 433 455 433 455 0.96 2 20 0.0054 0.32 11.6 0.7 1 20 461 480 461 483 0.94 3 20 1.9e-05 0.0012 19.3 5.6 1 23 502 524 502 524 0.98 4 20 3.4e-05 0.002 18.5 4.6 1 23 530 552 530 552 0.99 5 20 3.4e-05 0.002 18.5 5.3 1 23 558 580 558 580 0.97 6 20 1.6e-05 0.00095 19.5 7.2 1 23 586 608 586 608 0.97 7 20 6.6e-07 3.9e-05 23.9 2.9 1 23 614 636 614 636 0.97 8 20 9.4e-05 0.0056 17.1 6.7 1 23 642 664 642 664 0.97 9 20 0.0059 0.35 11.4 5.7 1 23 670 692 670 692 0.93 10 20 4.5e-07 2.7e-05 24.4 1.9 1 23 698 720 698 720 0.98 11 20 8.9e-06 0.00053 20.3 7.7 1 23 726 748 726 748 0.98 12 20 3.2e-06 0.00019 21.7 7.6 1 23 754 776 754 776 0.98 13 20 9.8e-05 0.0059 17.0 3.9 1 23 782 804 782 804 0.98 14 20 7.6e-05 0.0046 17.4 9.5 1 23 810 832 810 832 0.97 15 20 2e-06 0.00012 22.4 5.0 1 23 838 860 838 860 0.98 16 20 2.8e-06 0.00017 21.9 6.0 1 23 866 888 866 888 0.98 17 20 0.00013 0.0075 16.7 10.0 1 23 894 916 894 916 0.97 18 20 1e-05 0.00062 20.1 4.5 1 23 922 944 922 944 0.96 19 20 0.00031 0.019 15.5 0.4 1 23 951 973 951 973 0.96 20 20 0.025 1.5 9.5 5.4 1 23 980 1002 980 1002 0.99
Sequence Information
- Coding Sequence
- ATGAATCAAGAGCACCATAGTATCAATACGGGTGGTGGCCAACCGCCTGGCAATTCAGAGTCGCAGAACCAAAGAGTTCAATCTGCGCAGCAGCAACAGCAGACGACGAATTTGCCACCGACAACGTCAGCTACCGACTTGAGAGTTAACTCGGCAGCCGTGAACGTCGCTTTGTCGAGCGTTGCCAAGTACTGGGTGTTTACAAATCTATTCCCTGGACCATTACCACAAGTATCCGTATACAATTTGCCCAGTAATGCAAGAATCGAAAATGGAAAACCAGTGCAGGACCTCAGTCAGACTCACAGCATACTTAATGGTGATCCCAATATCATCCTCGGACACCACGCGGGGCAGCCACAGGTCACTGTGTCTGCATCAGGCCAACAGATACCAGTACCACAGATTATTGCCACACAATCTGGACAGACACATGAAGCGCTAGTAACGCATGGTCAACAGCAGGAGATCACAACACAGCAGGCGTCCAGCGGGGCTCAGGTGACTGTGAGCGCAAGCCAGAGCACCCATCAGCAGGTACCCAATAACCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCATGTGGGACATCATTCTCAACAACAGCATATACTTCAGCAACAGTTGTTGGCAGCTACACGGCAAGATCATTCAAATCAACAGATCCAGTTGACTGTGAGTGAAGATGGCATCGTCACGGTGGTGGAGCCCACGGCCAGCAAGCTGGTGGACAAAGATGATCTCCATGAGACCATCAAGTTGCCCACTGACCACACACTCACAGTCCATCAGTTGCAACAAATTGTTGGTCATCATCAGGTTATAGACAGCGTGGTTCGAATAGAACAAGCCACAGGGGAGCCGGCCAACATCCTTGTAACACAGAACCCAGATGGCACCACTTCAATAGAGACAAGTGTGTCTGGGGATCCCCTAGCTATTGTCAAAGATGAAAAATCCGTATCTAAGATTGAGGGTGCACAGTTTGCGATACCCGCTGAGATCAAGGATATTAAAGATCTAAAGAGCGTTGGCACCATGGGCATGGAAGGTGCGGTGGTGAAGATATCCGCCGGCGCGTCCGACCACGACCTGCACGCGATGTACAAGGTCAACGTGGAGGACCTCTCGCAGCTGCTCGCCTACCACGAGGTCTTCGGGAAACTGAACACCGACTCTAACACTGCTACCCAACAACAAACGAAGGTTATAAGCGAAGTAGAATCGGAGGCCGGGACGAGCGCGGCGGCGGCCGAGGCGGAGTCCGACTCGTCGCCCGGACACCACGCCTGCGATCTCTGCGGGAAAATATTCCAGTTCCGATACCAACTTATTGTTCATAGACGATATCACGGAGAAAGCAAGCCATTCACGTGCCAAGTCTGTGGGTCTGCATTTGCCAATCCTGTAGAGTTGTCAAAACATGGAAAATGTCACTTAGCTGGCGACCCAGCAGAAAGACAAAACAAGAGGTTAACACAAGACAAGCCATATGCCTGCACAACTTGTCACAAGACATTCTCAAGGAAAGAACACCTGGACAACCATGTACGGAGTCACACAGGCGAGACACCATACAGATGCCAGTACTGCGCGAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACCGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGCAAGGAACACTTCATGAACCACGTCATGTGGCATACCGGTGAAACCCCGCACCATTGTCAAATTTGCGGCAAGAAGTATACTAGGAGGGAGCATTTAGTGAACCATATGAGGTCACATACAAACGATACTCCGTTCCGCTGTGAACTGTGCGGCAAGTCGTTCACAAGAAAGGAACACTTCACCAATCACATATTGTGGCACACGGGCGAGACCCCGCACCGCTGCGACTTCTGTTCGAAGACCTTCACGCGCAAAGAACACTTACTAAACCACGTCCGTCAACACACGGGCGAGTCGCCGCACCGGTGCATATTCTGCTCGAAGTCCTTCACTCGCCGGGAACACCTCGTCAACCATGTGAGGCAGCACACCGGCGAGACTCCCTTCCAGTGTGGATACTGTCCGAAGGCGTTCACGAGGAAAGATCACCTGGTGAACCACGTACGTCAGCATACGGGCGAGTCGCCGCACAAGTGTTCGTACTGCACGAAGTCGTTCACGCGCAAGGAACATCTCACCAACCATGTCCGACAGCACACGGGCGAGTCCCCCCACAGATGTACTTACTGCTCCAAGTCCTTCACGAGGAAAGAACATCTCACCAATCACATCAGACAGCACACGGGTGAAACTCCGCACAAGTGTACGTACTGTCCGGACGCGTTCTCGAGTAAGGTGCATCTCACCCGCCACCTGAGAGAACACACCGGCGACACGTCCCACACCTGTGAACACTGCGGGAAGCACTTCACCCGCAAGGATCACCTCGTCGTTCACAAACGGCAGCACACGGGCGAGACGCCATTCAAGTGCACGTACTGTTCCAAGTCGTTCTCGCGCAAGGAGCACCTCACCAACCACGTGAACCTGCACACGGGCGAGACGCCGCACAAGTGCCCCTTCTGCACCAAGACCTTCTCGCGCAAGGAGCACCTCACCAACCACGTCAGGATACACACGGGTGAGTCGCCGCACCGGTGCGAGTTCTGTCACAAGACATTCACGCGCAAGGAACATCTAACGAACCACCTCAAACAGCACACGGGCGACACGCCGCACGCGTGCAAGGTGTGCCTCAAGCCGTTCACCAGGAAGGAACACCTCAATACGCATATGAGATCACACAGCTGTGGGGAGAGACCGTTTAGTTGTGACGAGTGTGGCAAGTCTTTCGCGTTGAAGGGAAATCTACTATTCCACGAAAGATCACACAACAAAGGGACGAAATCATTCAGATGTGACGTCTGTTCTAAAGAATTTATGTGTAAAGCTCACCTAGTAACGCACCGGAGAACGCACGCCGAGGCGGGCGACAGCGGCGGCAGCGCGGAGCCGGCGGCGGAGGGCGAAGACTGCGGCGACTGCAACAAGTGCGACAAGGACGTGCCCGACCTCGTCGAGCGGAAACACGACATAAGAGCCCCTTCAGAAAATAGACCGACAGAAGCAAATGTAGCACAAACCCAGCAAACTAATACAGCTGTAATGCAAATCACAAGTCAGCAAGTGAGAACAGGAACGCCGACAAACGCGACCAGTGTCGCCGCCGGTTCCTTCACGCACACCGCCAGCTCGCAACACCACGCCGGCACCGCTATAGCGCACCACACCGTCACTGTCAACTACTAG
- Protein Sequence
- MNQEHHSINTGGGQPPGNSESQNQRVQSAQQQQQTTNLPPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYNLPSNARIENGKPVQDLSQTHSILNGDPNIILGHHAGQPQVTVSASGQQIPVPQIIATQSGQTHEALVTHGQQQEITTQQASSGAQVTVSASQSTHQQVPNNRVEFVQHHNIDMVNHVGHHSQQQHILQQQLLAATRQDHSNQQIQLTVSEDGIVTVVEPTASKLVDKDDLHETIKLPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSVSGDPLAIVKDEKSVSKIEGAQFAIPAEIKDIKDLKSVGTMGMEGAVVKISAGASDHDLHAMYKVNVEDLSQLLAYHEVFGKLNTDSNTATQQQTKVISEVESEAGTSAAAAEAESDSSPGHHACDLCGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSKHGKCHLAGDPAERQNKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRREHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCIFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCSKSFTRKEHLTNHIRQHTGETPHKCTYCPDAFSSKVHLTRHLREHTGDTSHTCEHCGKHFTRKDHLVVHKRQHTGETPFKCTYCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCHKTFTRKEHLTNHLKQHTGDTPHACKVCLKPFTRKEHLNTHMRSHSCGERPFSCDECGKSFALKGNLLFHERSHNKGTKSFRCDVCSKEFMCKAHLVTHRRTHAEAGDSGGSAEPAAEGEDCGDCNKCDKDVPDLVERKHDIRAPSENRPTEANVAQTQQTNTAVMQITSQQVRTGTPTNATSVAAGSFTHTASSQHHAGTAIAHHTVTVNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00795879;
- 90% Identity
- -
- 80% Identity
- -