Etag013599.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990071.1:2575900-2579002[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8 3.7e+03 -2.3 0.1 20 26 40 46 40 46 0.90 2 2 3.8e-10 1.8e-07 30.8 0.0 4 35 86 118 83 123 0.92
Sequence Information
- Coding Sequence
- ATGAAAAAGAGCAATTCGAGAGTTAATTTACACCTCCCGAGCAGGAAGTTTACGACGGAGCGCATTTTATCGAATGCTACCGTGGCCGGTGCCGGCCGGTGCCGCTGCCGAGCCGAGAGTCGCGCCGCGAGAGTTTATTTATATTCGGCTAAGCTGCTGGAGAACTCCCACGCCTGGTTGGGAGCGTCTACTTCGTCTATTGCAGAGTTCCCCGGTCACACTGTCAAGTTGAAAGCGCCAACGTGGACGCAGAGGCAGCTGCAGGAGGCCATCCAAGCGGTGGTCACGCAGCGCATGCGGTTCACGCAGGCCGCCGCGCACTACGGGATACCCAAGGGGACCTTGTACGACAACATTTTAGGCAAATCTAAACGAATGGCTGTTCTAGACGAGGCCGGCTTGCAGCCCGCCGAGGAGCGCGCGGTCTTAGACTTCTGTTGCGAAACCAGCGTCTCTCCCTACAACAGACGAACTAAGAAGTCGCTAGCCGAAGTACTATCGTTTGTGGAAAAACTGAGAAGAGACAGGGACCCTGGTTTCGCGTTCATAGGTCTGACCGGCTTTAGGTGGTGGTGGGCGTTCTGTAAGAAGCACTCGATAGTGTCCTTGTACTATGAAGGATCGAGTAAGACTCGAAATCCCAAAGTGAAGACTGAACACAATACTGATGACGAATCTTAG
- Protein Sequence
- MKKSNSRVNLHLPSRKFTTERILSNATVAGAGRCRCRAESRAARVYLYSAKLLENSHAWLGASTSSIAEFPGHTVKLKAPTWTQRQLQEAIQAVVTQRMRFTQAAAHYGIPKGTLYDNILGKSKRMAVLDEAGLQPAEERAVLDFCCETSVSPYNRRTKKSLAEVLSFVEKLRRDRDPGFAFIGLTGFRWWWAFCKKHSIVSLYYEGSSKTRNPKVKTEHNTDDES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01181829; iTF_00284464; iTF_00647927; iTF_00824663; iTF_00035581;
- 90% Identity
- -
- 80% Identity
- -