Etag013326.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- At2g48020
- Assembly
- GCA_905147235.1
- Location
- LR990093.1:6196338-6208141[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6 4e+03 -2.4 0.0 15 23 137 146 135 146 0.79 2 2 4.7e-10 2.2e-07 30.5 0.0 2 38 514 550 513 552 0.93
Sequence Information
- Coding Sequence
- ATGTTGAATGTTCATATTTGGAGACAGCTGCTGGTGCTATGTGCGACCTGTATATATTCCTTCTCGTGTGGACTGCTGCTGGCTTTCCCGTCAGTTCTGAGCCCGGCAATATTGGCAGCTAACAGTACTGACATCAAGGCTACTCCGGACCAGGCCTCGTGGATTGCCGCATGTCATGGGATATCAGGCCTCTTGGGCTTCGCTGTTTTGTCTCCAATTTTTCAAATGATGGGCAGAAAAACTGTAAACATCATCTTAAACATCATCGCCTTAGTCGGCTGGATTATATTCTACTTCGCACAAAGCGTGATGTCATTAATTTTGGCAAGACTAGTCCAGGGGTTGGCAGTCGGAGGAGTTTTCATCGTTGCAGTCACCCTCAGTGAAAATTGCCTTCCCGCAAGAAGAGGGTACTTTATGTCCATGAAGAAGGCATCACTGGCATGCGGTTCGTTAGCCTGCCATTCTCTGGGGTTGCCGTGGTCTTGGAGAGAAATATCACTGTTTGCTATAATCGTTCAGTTCATTTCAACCATAATACTATTACCTTGTCCAGAGAGTCCGGCATATTTGGCAATGATCGGTAAATATGAGGAGTGTAAGGAAGCATACCGATGGTTATTCGGACAGTCACCAGACACAGAGAAGGCATTAAGAGAGATGATAGCAGCACGGATGGAGAACAGGGAAGGAAAAACAAACACCAAAATGTGCCAGCAGATAAAGAACACAGCGATGATTCTACTGAAGAAGGACTTTCAAAAGCCGTTTTTCATCGTGGTCTTGGCAACATTAGCGGTAGACGCTTGCGGAAGATACTTTATGCTGGCGTACATAACGCAGATAATGATTGAGATCACTGGAGACAGATCGTGGCTGATACTGTCCGGTGCTTCTTTGTTTACCTTTTCATCAGGAATAATCCTTGCTCTTCCGGCTGTATTGAATCCGGCCATCTTGGCTCCAAATGCGACCATCAAAGCAACGCCTGAACAAGCCTCCTGGATTGCTGCATGCCATGGAATCGCCGGCTTCCTCGGGTACTGCATCATGTCTCCAATCTTCGAGTTCTTCGGCAGGAAAACGACCAACATCGTAATGAATCTCTTCATATTCTGCGGTTGTTTCATGTACTACGTCGCCAGCGATGTCTTCTCCTTGGTATTCGCCAGACTTGCCCAAGGGTTATCAATTGGAGGGAATTTTACCTACGCCATCGCTCTCTGTGAGTGCGTGTCCCCAAAACGAAGGTGCTATTTCTTGGTCATCACCAAGCTCATGCTTGGCTTGGGATCTTTAGCTTGTCATGCCCTAGCCTTTGTACTAGATTGGAGGCAAATAGCCACATTTAACGCTTTACCATCAGGCATAGCTGTAATAATATTCTCAATTTGCCCCGAAAGTCCCTCGTATTACGCCTCTCGAGGAGAATTTGATAAATGCGAGAAGACATTCAAATGGTATCGTGGCGATTCACTATCAGCTAAGAGAGAGTTGAAAGAAATATCGCCAAATAAAAGAAAGTACTTCGCATGGAATGAAACAAGTATGAACCTTGCTTTAGAATCAGTGAAGAAACAAAGAATTGGTTTAAATGAAGCAAGCAGAATCTATGGTGTGCCAAAAGCAACTCTTAAACGAAGGTTAGATGGAGTTAACTAG
- Protein Sequence
- MLNVHIWRQLLVLCATCIYSFSCGLLLAFPSVLSPAILAANSTDIKATPDQASWIAACHGISGLLGFAVLSPIFQMMGRKTVNIILNIIALVGWIIFYFAQSVMSLILARLVQGLAVGGVFIVAVTLSENCLPARRGYFMSMKKASLACGSLACHSLGLPWSWREISLFAIIVQFISTIILLPCPESPAYLAMIGKYEECKEAYRWLFGQSPDTEKALREMIAARMENREGKTNTKMCQQIKNTAMILLKKDFQKPFFIVVLATLAVDACGRYFMLAYITQIMIEITGDRSWLILSGASLFTFSSGIILALPAVLNPAILAPNATIKATPEQASWIAACHGIAGFLGYCIMSPIFEFFGRKTTNIVMNLFIFCGCFMYYVASDVFSLVFARLAQGLSIGGNFTYAIALCECVSPKRRCYFLVITKLMLGLGSLACHALAFVLDWRQIATFNALPSGIAVIIFSICPESPSYYASRGEFDKCEKTFKWYRGDSLSAKRELKEISPNKRKYFAWNETSMNLALESVKKQRIGLNEASRIYGVPKATLKRRLDGVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -