Etag006908.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990081.1:11718412-11727989[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-10 8.8e-08 31.8 0.0 4 39 179 215 177 219 0.90 2 4 1.1e-11 5.3e-09 35.7 0.3 4 39 233 268 230 271 0.92 3 4 1.8e-15 8.6e-13 47.8 0.1 2 45 286 330 285 330 0.96 4 4 1.5e-15 7e-13 48.1 0.0 2 43 338 380 337 381 0.95
Sequence Information
- Coding Sequence
- ATGCCCGGGTACGAGCCGAGGGCCTTGAAGTGTGAACCGCCGTCTGATGATGAAGACTCGCAGTACAATCCAGCCTATATCTCTAACCTGCACATCACGTCGGATCTTCTACCAGTTAAATTGGAAAGGGATCGTTCCAACGACGAGAATGCAGTTACGGACATCTTGCATCATTTGCAGTGCGGCGGGCTGGAGGAGCCGTGCGCGCCGGCCGCGCCCGCCGCCACGCCGGTGCGCGCGCGCCTGCCCGCGCCGCCCGCCGCCGCCGCCTCGCTCGAGACGCTGGAGCCCGCGCCGCACGCCAACACGCACCCGCACACGCACACGCTGCTGGGTTCCACTCCTGACAGACGCGCGACTTTAACAGAATATGAAATCCCAGACTCATCGGATTTCATCCCTTTGCTAGCTGTGAAGGATGAGCCCTTATCAGAAGGAGAACAACACCATCTAAGCGGCGATGACACGAGCGACTCCGGCGGAGCCGTGCGGGAAGCGCCGTGTCGAGGCACGCCCAAGACGTGGTCCGCGCAGGCCATGGACGACGCCCTGGACGCGCTCAGGAGTCACCGCATGAGCCTCACGAAGGCGTCGGCGCGGTTCGGCATCCCGTCGACGACGCTGTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCCAAGAAGGACGGCGGCGCGCGCGCCTGGCGCGACCACGACCTGCGCGCCGCGCTCGCCGCGCTGCGGGCCGGCGCGCTCTCCGCCAACAAGGCCAGCAAGGCTTACGGCATCCCGAGCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGGCTGGCGGCGCCGTTCAACGCGGCGCCCACGGCGTGGCGGCGCGCCGACCTGCAGCGCGCGCTCGCCGCCATCCGCGCGGGCGCCTGCTCCGTGCAGCGCGCCGCCGCGCAGTACGGCATCCCCACCGGCACGCTGTACGGGCGCTGCAAGCGGGAGGGCATCGAGCTGTCGCGCGCCAGCCCCGCGCCCTGGTCCGAGGGCGCCATGGGCGACGCGCTCGAGGCCGTCAGGGTGGGCCACATGTCCATAAACCAAGCGGCGATCCACTTCAACCTGCCCTACTCCTCATTGTACGGCCGCTTCAAACGGTGCAAGTATCAGCTACAGGGCATACCTCCCCCCCCTCAGCAGGAGCCCCCCGGCGGCGGCGGCACGGAGGAGCCGCAGCGCTACTGTCCCGTGCGAGGGCCGGCGCACGAGGGCGTGTCCTACGACGTGCCCTTCGGCCACATGTTCGAGTACGACTCCTCCGTGAGCCACCACTACGCGCAGTGCGGCATCCCCTCGTTGATCAGTTGA
- Protein Sequence
- MPGYEPRALKCEPPSDDEDSQYNPAYISNLHITSDLLPVKLERDRSNDENAVTDILHHLQCGGLEEPCAPAAPAATPVRARLPAPPAAAASLETLEPAPHANTHPHTHTLLGSTPDRRATLTEYEIPDSSDFIPLLAVKDEPLSEGEQHHLSGDDTSDSGGAVREAPCRGTPKTWSAQAMDDALDALRSHRMSLTKASARFGIPSTTLWQRAHRLGIDTPKKDGGARAWRDHDLRAALAALRAGALSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQRALAAIRAGACSVQRAAAQYGIPTGTLYGRCKREGIELSRASPAPWSEGAMGDALEAVRVGHMSINQAAIHFNLPYSSLYGRFKRCKYQLQGIPPPPQQEPPGGGGTEEPQRYCPVRGPAHEGVSYDVPFGHMFEYDSSVSHHYAQCGIPSLIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -