Basic Information

Insect: Eristalis tenax
Gene Symbol: ush
Assembly: GCA_905231855.1
Location: HG993125.1:59244445-59251140[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0092 1.4 10.1 0.0 1 20 261 280 261 282 0.90

2 9 0.00018 0.028 15.4 0.8 1 23 327 349 327 349 0.98

3 9 0.019 3 9.1 1.0 2 21 374 393 374 394 0.92

4 9 0.032 4.8 8.4 2.9 2 21 760 779 759 780 0.93

5 9 0.0057 0.87 10.8 0.0 3 21 817 835 815 836 0.92

6 9 0.86 1.3e+02 3.9 0.1 1 19 883 905 883 907 0.62

7 9 0.0092 1.4 10.1 1.3 1 23 911 933 911 933 0.99

8 9 8.4 1.3e+03 0.8 0.1 12 23 939 951 936 951 0.88

9 9 0.25 39 5.6 0.6 2 20 1082 1100 1081 1102 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0092	1.4	10.1	0.0	1	20	261	280	261	282	0.90
2	9	0.00018	0.028	15.4	0.8	1	23	327	349	327	349	0.98
3	9	0.019	3	9.1	1.0	2	21	374	393	374	394	0.92
4	9	0.032	4.8	8.4	2.9	2	21	760	779	759	780	0.93
5	9	0.0057	0.87	10.8	0.0	3	21	817	835	815	836	0.92
6	9	0.86	1.3e+02	3.9	0.1	1	19	883	905	883	907	0.62
7	9	0.0092	1.4	10.1	1.3	1	23	911	933	911	933	0.99
8	9	8.4	1.3e+03	0.8	0.1	12	23	939	951	936	951	0.88
9	9	0.25	39	5.6	0.6	2	20	1082	1100	1081	1102	0.91

Sequence Information

Coding Sequence: ATGCAATACACTGAGAGCCGCAGAAAAGCAGGAGTCAGACGCTCCAGCGCAGCAACGGCAGCAGCAGAAGCAACACCACCACCATCAGCACACTACTACCGCCACCACGACCATCAGCAGCAACAACAAAAACACCACGGGACGGGAGTGTACAACACCCTGCCCGTCTCGCATATGTACGAGTGTATGCCGGTGATCTCGGTAGGATTTGCTCCAGAAATGCGCTCGGCTCTTTCTCCTCTCCTCGTCGTGCGCGCCTACTTGGAAACAAAAGAACTTAGCCCGAGTGATTTGAATGAGCAGGCCGATGCGGCTGCGTCGGCGGATGTAGATCAATCGGCCGAACCGCGAACTCCGTTCACAACGGAATCGTTGATGGACGAAAATCGGCCATCTTCGAGCACGCCTCGGACCTTATCATCCCCATCGGATGTGGAAGCAGATGACCAGCATCCTCCATCACTTCGTTCAGATCCTCAATCAGGGGCGAATTCACCCTTAGAACCGGATGATTCATCGATAGTTCCTGCGGCCGCTGTTGCTAACGTTCCTAAGCTACGATTGAATGCGCTTCTAGCTTCTGATCCGGCTCTTAATCCAGACGCCAGAAATCTAAAAATCCTCCACGAAGAATCGACGAAAAACCAACAACATCTCGACGATGCCGCCGCGTCATCGTCTTCGACATCAGCTACAGCCGCTTCGGCGTCAGTTGATTCGAAGGTTTCGGTGAAAAATCAAACATCGGCCGTGGTTGACAATGCTCAACGCGTCAAGGTGTTCATGTGTCTTCCCTGTGGCATAGGATTCTCATCGAGATCAACTCTCGAGGCTCATCAAGCCTATTATTGTTCCCACAGAAAGGAAAACGAAGAAGATGCTGCTGGTGGTGGCACTGGAAGTACATCGTCAGGTGACAAGAATTCCACAACAACATCCGGTGAGCCATCAGCTAAATCCATTAAGACTGGCAAGCAATACGCTTGCACACAGTGCTCGTACAGTGCCGACAAGAAGGTCTCATTAAATCGTCACATGCGTATGCACCAAAGTTCACCAGCGCCTAGTTCGAACGCCTCAAATGGCGGTGATGACAGTTCTAGTCAACAAATCGATCGTTACTGCTCCGAATGTGATATTAGATTCTCGAATGTAAAAACTTATCGGGCGCATAAGCAGCACTACTGTAGTTCCAGGCGCAATGATGGACAAACGACACCAAAGCTAGTGGAACAAAGCGTAAAAACAAGTGGAGGTTCAGTGAGTCCCCCACAGGCGAGAACAAAGACCCCAACACCGGCTGCAGCTGCCGCCGTTACTCCGCAGCCATTCATTGCACTACCCACGAATCCAATCTTAATTATTCCGTACTATTTAATTCGAGCGGCCAGCATGATACCAGGGCCACTAACATCCGTATCGTCTGGGATCGCAAATCCGGAAAGCACATGCTTCTCACTAGAAAATGGATCTCTCAAACCGATGGCCACCGCGCTGAGTCCCAGCAGCATTGCGAACAATCAAATTCCACACGTAGATTCCACATCACGATCGCATCCTCCACCACCCAGCACTCCATCAAACAATAATGACGCTGGTACACCAGCACCACTGCTCACCGAGAAGAACGCTCGTGCTGCTTCGGCAAATAGTTGCAGCGAATCTGTGAAGCAGAACAAAAAGGATGGTGCAGTGAGGGAATTCGCGCCTCTGGATCTTTCATTGCGACGCTCTCCGATGCCCAGGGCACAGCGTGTCCGGTCCTCGTCGAGTTTTGCACCACCAGTCGATGATAGAGTCGATATCGAAAGCATGATGGAGGGCAAGGAGAATCTCTCCATCGACAGTGGCAGTATGACACCTGAACAAATAGTTTGTGCTCCATCTTTACCCAATAGCCCGTCGATGAGTCCATCGCCCAAGAGGAGAGCACTTAGTCCAAGAAGCAGCAGCGCTGCATCGATGTCACCCGTACCGCCATCTGTTATAGACCATCTGCCACTGCGGTCGATAATTCCGACTGACATTGCAATGAAATTGTCCGAGTCACACATCATTCCACCACTCATTGCAAAACAGAAACTAGAGCTAGCCCTGACACTCTCGTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGATTCGAGCAAAGCCCCTGCAAGTAATCCCCTCTTGAGTTTGCCTGGAGCCCCGATAACTGTGGGTGGAGCACCCAGTGGTCAGCCACAGATTTTCGTCAAGCAGGGTGTCTCCAAGTGCAAAGAGTGCAACATCGTATTCTGCAAATATGAGAACTACTTGGCTCACAAGCAGCATTACTGTTCGGCTAGAAACCAAGAGGACACTGAAAACAAAATCAGCACACCGCCGACGACATCCATCACTGGAGCGGAGAGCAATCCGATTGCGTATCAGCAGTTAATATGTGCCGCCTGCGGTATCAAGTACACATCGCTGGACAACTTGAGAGCTCATCAGAAGTTCTACTGCCCCAAAGGAGGTGGTGACGCTGCCGCTGCCCCGCCCATAACACGGGAAAAATGTGCAAAATGTAAGGTTCTCCACGAAATTGGTCAGCCATGTCCTCCAATGGCTGCGGCTGCTGTCGCACCACAAGGTTCCTACAAGTGTCCCGTTTGTGATGTGATCAGCTTGACAGCTGTCGAAAGTCGGAAGCATCTGGAGACTCATGGCAGCGTAAAGGCATTTCGCTGTTCCATTTGTCGATACAAGGGGAATACATTGCGCGGGATGAGGACACACATTCGAATGCATTTTGACAAGAAGACATCCCCAGGCAATGTGATGCGTCACATGAAACTTGTTCACTCCCAGCCTGGAGCATCGCCTTCTCCTGAGATGTTGATAGAGGACGTTGAGCCTGCCGCGCACAGTGTGAACGGAGACAACGGTAATAGTCTTCCCGAGAGTTTCACAATCAAAACGGAACCATTAGACTCAACTGCCATGACCGTCGTCTCCAAGAACAATAACAACACAACTCCAAATCATCATCAACATCATCATCATCTGGAACCGTTGACACAGATCAAATCCGAGCCAATGGATGTAACAGATGGTGTTATACGATCTCTTCCATCGCCATTGTCTGTTCCACCGCCGCCGATCAATTCATCTTCGCCACTGTCTGGAGACGAGAACTCATTGCTGAGGAATCCCGGTTCGATCGGATCCACTGGAATGCCCTTTAATCAGAAATACTGTCAAACGTGCGACATAACATTTAACTATATGAAAACATATTTAGCTCATAAACAGTACTATTGTAAGAATAAGACTCGTGGTGATGCAGACAGTCCAAGTCCGGTGCCACCGGTGCAATCGCCAACTATGTTGAATAAGAATAAAGAGAACTTGGAAGCGGCTATCTTATAG
Protein Sequence: MQYTESRRKAGVRRSSAATAAAEATPPPSAHYYRHHDHQQQQQKHHGTGVYNTLPVSHMYECMPVISVGFAPEMRSALSPLLVVRAYLETKELSPSDLNEQADAAASADVDQSAEPRTPFTTESLMDENRPSSSTPRTLSSPSDVEADDQHPPSLRSDPQSGANSPLEPDDSSIVPAAAVANVPKLRLNALLASDPALNPDARNLKILHEESTKNQQHLDDAAASSSSTSATAASASVDSKVSVKNQTSAVVDNAQRVKVFMCLPCGIGFSSRSTLEAHQAYYCSHRKENEEDAAGGGTGSTSSGDKNSTTTSGEPSAKSIKTGKQYACTQCSYSADKKVSLNRHMRMHQSSPAPSSNASNGGDDSSSQQIDRYCSECDIRFSNVKTYRAHKQHYCSSRRNDGQTTPKLVEQSVKTSGGSVSPPQARTKTPTPAAAAAVTPQPFIALPTNPILIIPYYLIRAASMIPGPLTSVSSGIANPESTCFSLENGSLKPMATALSPSSIANNQIPHVDSTSRSHPPPPSTPSNNNDAGTPAPLLTEKNARAASANSCSESVKQNKKDGAVREFAPLDLSLRRSPMPRAQRVRSSSSFAPPVDDRVDIESMMEGKENLSIDSGSMTPEQIVCAPSLPNSPSMSPSPKRRALSPRSSSAASMSPVPPSVIDHLPLRSIIPTDIAMKLSESHIIPPLIAKQKLELALTLSSXXXXXXXXXXXXXXXXXXDSSKAPASNPLLSLPGAPITVGGAPSGQPQIFVKQGVSKCKECNIVFCKYENYLAHKQHYCSARNQEDTENKISTPPTTSITGAESNPIAYQQLICAACGIKYTSLDNLRAHQKFYCPKGGGDAAAAPPITREKCAKCKVLHEIGQPCPPMAAAAVAPQGSYKCPVCDVISLTAVESRKHLETHGSVKAFRCSICRYKGNTLRGMRTHIRMHFDKKTSPGNVMRHMKLVHSQPGASPSPEMLIEDVEPAAHSVNGDNGNSLPESFTIKTEPLDSTAMTVVSKNNNNTTPNHHQHHHHLEPLTQIKSEPMDVTDGVIRSLPSPLSVPPPPINSSSPLSGDENSLLRNPGSIGSTGMPFNQKYCQTCDITFNYMKTYLAHKQYYCKNKTRGDADSPSPVPPVQSPTMLNKNKENLEAAIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00672452; iTF_00671800;
90% Identity: -
80% Identity: -