Eten002280.1
Basic Information
- Insect
- Eristalis tenax
- Gene Symbol
- -
- Assembly
- GCA_905231855.1
- Location
- HG993128.1:30470400-30472894[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00096 0.15 13.2 0.4 1 23 147 170 147 170 0.97 2 11 0.035 5.4 8.3 0.7 2 23 318 338 317 338 0.96 3 11 7.3e-05 0.011 16.7 3.3 1 23 344 367 344 367 0.98 4 11 6 9.1e+02 1.2 2.6 2 23 400 421 399 421 0.87 5 11 0.00012 0.018 16.0 1.9 1 23 427 449 427 449 0.95 6 11 4.8e-08 7.3e-06 26.7 1.0 3 23 461 481 459 481 0.97 7 11 4.9e-06 0.00074 20.4 1.7 1 23 488 510 488 510 0.98 8 11 9e-06 0.0014 19.6 0.9 2 23 516 537 515 537 0.96 9 11 3.3e-05 0.005 17.8 1.0 1 20 543 562 543 565 0.93 10 11 0.0013 0.2 12.8 0.2 2 19 571 588 570 590 0.95 11 11 1.4e-05 0.0022 18.9 0.3 1 23 597 620 597 620 0.98
Sequence Information
- Coding Sequence
- ATGTATGGCTCACTGCCAATTTGCAGGGTGTGTTTGAAACCATCATTAGAATACATAGATTTCGACACTCCATTTGAGGTTGATTCAAGCAAGGATGTCGGAAATGACCTGACGTACCTAGACTGCTTTCTGGCATGTACACGTCTTGAATTTGATTTATCGGAAAACTGTCCACAAAGTTTGTGTGCTTCCTGCGGCTTGGAATTGAAAATAGCTTATGAATTCCTGCAAAAGGCTGAGTTGGCTGATAAGACACTACGAGACTACTCTTCAAATCATAAGTTTGAAAAATTGGAAGACCAAGAGGATGGTGAAATCCCTCAGACACGTGCTAACTTGCTCTTTGATCATATAAGAAGTGAGGAAAATAGTAAACAGGATACCTTCAGCATAACTGAAGTAGAACAAAGCGAAAGTCAAATCGAAGATGAAAAGAGCTTTGTTTGTACAGTGTGTGGTGAACAATTTTTCTCGCAGTTTGTTCTTAATTTACATGTAAACAGATCGCACTCGTCGGACGATAAGGATGAAAAACAATTTTCGGTGGGAAAAGTCGAATGTCATATTTGTGAACTTGTTATACCACTGGAAAATTTGAGTTTTCATATGCAAATACACGATGAAACAAACTGTTTGGAGCTTGAATCCAATCCAAATCCAGTTACTAGCAATGATGAACAACTAATTGATGTTGGGGAAGAAGCTGACTTCGAGTTACTGGAGATGACAACTGACTATCAAATGGATTTAATGCATAACACAAATGCAGAGGAAAAGTCCATTGATGAAGAAATTACACTTGATGATTTTGATACAAGTGCGCCCGAAGGAAACTGCGGGAGTGATTTCATAAAAGCGGAGACAGAATTCGATATTGACAGCAAATTCTGTGCAATAGGCAATATTCTTACAGACCAAGAGAAAATGCGTGTTACAAAACCAAATTATAAAAGATGTCCAATTTGCAACCGGCATGTACGAATGGTGTCATATCAAGCTCATATTAACGTTCACAATGGAATTCGACAGTTTTCATGTGAACATTGTCCGGAAAATTTTTTCTCAAAACGGTCACTTCAAACTCATGTAAAGACATCACACAAGGATCACCTAAAATCAATTTGCAGAATATGTCATGAGTCTGTGGATGGTTTGGACATGAAATCGCATATACAGGAAAGGCATTTGCGGACTGTGAAGTGTTCCCATTGTGATTATCAGGGACAAGAGCTCAAAATGAAGGAACACATGAAACGGAGGCATGCGGAATCAAGAGACTTTTTATGTAATATATGCTCTAAAACATTTTGCACACTTGGTGTACTCAACGCCCACTTAAAATATCATGAACGTAAGGAGTCCAATGTTAAGTCCGACGCCTGTGAAATATGTGGCAAAGTTTTTTCTACCAACCATTATCTTAAATCACATATGCTAACGCATCGAGATGAAAGAGAACTATTTGAGTGTAGCAATTGTGACAAGAGCTATCATTCAAAAGCTGCACTTGATAATCATATGCGAATGCACAAAGGTGATACAATAAAATGCCTTTTATGTTCGAAACAGTTTGCTAGACAATATGAGTTAAATGTTCATATGCGTTTTCACACCAAAAATTATCCATTCGAATGCGAGCTTTGTGGTAAGAAGTTTGCTATTAAAGGTCATTTGAGAACGCATATGTGGCGCCATCAAGGTCTTAAACTACAGTGTGAAGAATGTGGGAAACTTTTTACATCGACAAAAGCGCTACAAGAACACTCATTTTGTCATTCCGAGATGCCATTCCCCTGCCCATACTGTACAAAAGCTTACCCTTCTAAACCAAAATTTAAAGTTCATCTAAAGACGGCTCATAATGCTGAATTTTCAAATGATGAATTACAAAAAATGAGCAAATTTCCATTGCCAAAACGTTCAAGATCGAAAAAATTTACATTGGTACAGGCTGACACTGTGATGAAAGAAGTTGAAGTTCACACCAAAGAGGATAAAGAGGACGACGAAGAGCAGATATAA
- Protein Sequence
- MYGSLPICRVCLKPSLEYIDFDTPFEVDSSKDVGNDLTYLDCFLACTRLEFDLSENCPQSLCASCGLELKIAYEFLQKAELADKTLRDYSSNHKFEKLEDQEDGEIPQTRANLLFDHIRSEENSKQDTFSITEVEQSESQIEDEKSFVCTVCGEQFFSQFVLNLHVNRSHSSDDKDEKQFSVGKVECHICELVIPLENLSFHMQIHDETNCLELESNPNPVTSNDEQLIDVGEEADFELLEMTTDYQMDLMHNTNAEEKSIDEEITLDDFDTSAPEGNCGSDFIKAETEFDIDSKFCAIGNILTDQEKMRVTKPNYKRCPICNRHVRMVSYQAHINVHNGIRQFSCEHCPENFFSKRSLQTHVKTSHKDHLKSICRICHESVDGLDMKSHIQERHLRTVKCSHCDYQGQELKMKEHMKRRHAESRDFLCNICSKTFCTLGVLNAHLKYHERKESNVKSDACEICGKVFSTNHYLKSHMLTHRDERELFECSNCDKSYHSKAALDNHMRMHKGDTIKCLLCSKQFARQYELNVHMRFHTKNYPFECELCGKKFAIKGHLRTHMWRHQGLKLQCEECGKLFTSTKALQEHSFCHSEMPFPCPYCTKAYPSKPKFKVHLKTAHNAEFSNDELQKMSKFPLPKRSRSKKFTLVQADTVMKEVEVHTKEDKEDDEEQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -