Eten004576.1
Basic Information
- Insect
- Eristalis tenax
- Gene Symbol
- -
- Assembly
- GCA_905231855.1
- Location
- HG993128.1:65278404-65280132[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 2.8e-05 0.0043 18.0 6.1 1 23 129 151 129 151 0.97 2 11 5e-06 0.00077 20.4 2.3 1 23 158 180 158 180 0.98 3 11 1.2e-06 0.00018 22.3 0.5 1 23 198 220 198 220 0.99 4 11 3.9e-06 0.0006 20.7 2.5 1 23 230 252 230 252 0.99 5 11 2.7e-06 0.00041 21.2 0.7 2 23 259 280 258 280 0.97 6 11 0.0005 0.076 14.1 7.1 1 23 286 308 286 308 0.97 7 11 8.6e-07 0.00013 22.8 0.5 2 23 315 336 314 336 0.94 8 11 1 1.5e+02 3.7 0.5 1 8 342 349 342 350 0.90 9 11 0.0026 0.4 11.8 8.2 1 23 353 375 353 375 0.99 10 11 7.4e-07 0.00011 23.0 1.0 1 23 381 403 381 403 0.98 11 11 3e-05 0.0045 17.9 1.3 1 23 409 431 409 431 0.97
Sequence Information
- Coding Sequence
- ATGAGAACAGCGCTAGAAAAATATGATGTCCCTGTAGAAAAACTGAATACAGAATTACTTTTGAAAGATCTACTGTCTTTTGAAAAGGAAATCAATGTTGATCCATTATATGAAAATGGTGACAGGAAGTCTTCTAAAGCAGAGAAATCTACAAACAACGACAAAGAAGACCAAAGTGCCTCAGAGCCAGGATCTCCTGAACTGTGCATAAAGAGAGAAACCATTTTGAGGGAGAACATTGAACCATCTGAAGAGGAATATCATTCTGATGGAGGCATGGAAAGCTTAAACGAAAATTTGATAGACATTGTAGAGCCTGATTCCGCTCAACCAGACAACGTTGAAATCGAAAAACCTAATCCCCGCAATCGTCGAACTGCTTGCCATACGTGCAAGATTTGTGAAAAATCATTTGACCGTTATCATCGTCTCAATCGGCATATGAATTTGCATAGGGAAGACGGCCGACCATATGAATGTGAACAGTGCAAGCGACGTTTTACCAAAGAGGCTCACCTTCAGCGACACGCAATAACCCATGAGAAAAATTTCCAAGAAAAGACAGAACAAAACAAACACAACCCCGATGGTTACCAATGCCCAGATTGTCCACGAAAATTCCTCAAACAGGAGTCCTTGGCTTCTCACATGCGTACACATCGCAAAAACGATGATCCAGCCAAGAGTTATCAATGTGAAATATGTTCGAAAAAATTCGAGAGATTGTATCGCCTCACACGACATAGGAAAGTTCACGAGGAGCACAGAAAACTAAGCTGTGACATCTGCGGAAAAACATTTGGTTTAAGTTCGCACTTAATCGATCATCTCAACAAGCATAGCGGTATCAAGCCACACATTTGCCATTACTGTGATAAGTCTTTTCTCCAAGCATGTACACTTAAAGATCACTTGCGTACACATACTGGAGAGCAGCCATTTCTATGTTCGGCGTGCGGAAAAGCATTTAATAATGCTAGCAACTTACGTCAGCATCAACTTAGACATACCGGCATCAAACGTTATCAGTGTCCAGAGTGCCCTAGAGAGAAACCCTACAAGTGTGACTACTGCGAAATGAGGTTCAATTGCTCAGACCATATGAAGCGACATCGCCGAACCCATACTGGAGAGAAACCATATGCATGCAAGTACTGTGAGAAAACATTTGCCCAGTCAAACGATATGATCAAGCATTTGCGCTCACACGTAGGCGAGAACGTCTACAAGTGTCAAAAGTGTGAAGCAACATTTCGCTTGAGTACAGAACTTAAGAGGCACATCACGGAGCACTACAAGGAGGAAAGAGCTCTGATGGAGGAGGACCTAACTGAAGTCCCAGCTGACGAATAG
- Protein Sequence
- MRTALEKYDVPVEKLNTELLLKDLLSFEKEINVDPLYENGDRKSSKAEKSTNNDKEDQSASEPGSPELCIKRETILRENIEPSEEEYHSDGGMESLNENLIDIVEPDSAQPDNVEIEKPNPRNRRTACHTCKICEKSFDRYHRLNRHMNLHREDGRPYECEQCKRRFTKEAHLQRHAITHEKNFQEKTEQNKHNPDGYQCPDCPRKFLKQESLASHMRTHRKNDDPAKSYQCEICSKKFERLYRLTRHRKVHEEHRKLSCDICGKTFGLSSHLIDHLNKHSGIKPHICHYCDKSFLQACTLKDHLRTHTGEQPFLCSACGKAFNNASNLRQHQLRHTGIKRYQCPECPREKPYKCDYCEMRFNCSDHMKRHRRTHTGEKPYACKYCEKTFAQSNDMIKHLRSHVGENVYKCQKCEATFRLSTELKRHITEHYKEERALMEEDLTEVPADE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -