Basic Information

Insect: Eristalis tenax
Gene Symbol: su(Hw)
Assembly: GCA_905231855.1
Location: HG993124.1:28503173-28508323[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0008 0.12 13.4 1.7 1 21 109 129 109 130 0.95

2 11 0.00026 0.04 15.0 0.1 3 23 181 202 179 202 0.92

3 11 0.023 3.5 8.9 0.3 1 23 208 230 208 230 0.96

4 11 6.3e-07 9.7e-05 23.2 2.1 1 21 237 257 237 258 0.95

5 11 4.3e-06 0.00066 20.6 1.4 2 23 270 291 269 291 0.97

6 11 2.8e-08 4.3e-06 27.4 1.7 1 23 302 324 302 324 0.99

7 11 0.00021 0.031 15.3 0.6 1 23 330 352 330 352 0.98

8 11 9.5e-05 0.015 16.3 0.8 1 23 358 380 358 380 0.99

9 11 1.5e-06 0.00024 22.0 2.2 1 23 386 408 386 408 0.96

10 11 3.8e-06 0.00058 20.7 2.0 1 23 412 434 412 434 0.97

11 11 0.028 4.3 8.6 0.2 2 23 455 477 454 477 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0008	0.12	13.4	1.7	1	21	109	129	109	130	0.95
2	11	0.00026	0.04	15.0	0.1	3	23	181	202	179	202	0.92
3	11	0.023	3.5	8.9	0.3	1	23	208	230	208	230	0.96
4	11	6.3e-07	9.7e-05	23.2	2.1	1	21	237	257	237	258	0.95
5	11	4.3e-06	0.00066	20.6	1.4	2	23	270	291	269	291	0.97
6	11	2.8e-08	4.3e-06	27.4	1.7	1	23	302	324	302	324	0.99
7	11	0.00021	0.031	15.3	0.6	1	23	330	352	330	352	0.98
8	11	9.5e-05	0.015	16.3	0.8	1	23	358	380	358	380	0.99
9	11	1.5e-06	0.00024	22.0	2.2	1	23	386	408	386	408	0.96
10	11	3.8e-06	0.00058	20.7	2.0	1	23	412	434	412	434	0.97
11	11	0.028	4.3	8.6	0.2	2	23	455	477	454	477	0.93

Sequence Information

Coding Sequence: ATGAAGCGAGCTGCAAAACCAGTAACCAGAGGCAGCAGGCTATTGCTCAACAAAACAAAGTCTCCACCCCCACCAAAAATCTCAAAAAAGGACATCATTGACCTCGAACTCGATGAAGCAGATAAAACCAATCATTATTTGCTAACGGAAATTAAAGGCCAGGAAAATGAACACGAGATCGCATTTGTCCTCACCACTAATAGCACTGAGGATGGAGACAAACCACCTCCAGCCGAATGTCGAGAGGAGATTCAAATTGAAGAGGCTTGTCAAGAGGAGGAAGACGAAGATGACGACAAGGTCAGTACCAAGGAAATAGTTGAACATGTATGTGGCAAGTGCTACAAATCCTTTCGGACAATAAAGGTGCTTAAACGGCACATAAAATATTGCATCTTCAACAGTGAAATGGATATCCGAAAATCGAAGATGGCAAACAACATCGGCAAAATCGAGAAAGAAGCGCTTATTATGGAGAAGAAGGATCTGTGCTTCTGCTGTGGAGATAGTTACGATACTTGTCATCTTGGTCACGTTAATTGTCCCGAATGTCCAAAATCTTTTAACTCGCAAATTATATTGGAACGTCACATGTTTCTCATTCATTCGGAGAATAAAGATTTCCCATGTCCCATTTGCAATGGTCACATCCGGACGGAGCGGTTGCTGAAACTGCATATTGACCAGCACAAAAATCGAGGCAAACCTTATGCATGTAAACAATGTGGAAAGGACTTCACACGGCAGTATCACTTGAAGCGACATCTCATGTACACGAGCTGCGGTGAAGGGCAGGTGGAAACGATGAAGTGCAAAGTGTGTTCGAAGGAATTCTATCGCTTGGACAACTTGCGCGTACATCTAAAATCACACTTGGGCCAAAAGGCGGTTAGGAGGTCCGAATATACGTGCCCATATTGCAAAAAGAGCTTCTACAGCTTGTCCACGCTTAATATCCACATTCGCACGCATACTGGTGAGAGGCCGTATAATTGCGACCTTTGTGACAACAATTTCCCGTCATTAGTGGCGTTGAAGAAGCACAGGAGATACCATACTGGAGAGAAACCTTACACCTGTTCAGTGTGTTCCCAAACTTTTGCCGTCAAGGAGATTCTGAACAGACATATGAAGAGACACACGGGCGACAAGGCACACGCATGCGATGAATGTGACAAGCGCTTCATCCAAGCCACTCAGCTGAGAAATCATAAGCGCACACATTTACGACCCTTTGCGTGTACCCAGTGCGATGAAAAATTCAAAAAGGAGAAAATGCTTGAAAAGCACATGAAAACACACAACAAATCAACAAGCCGAAGGTCGACAAAAGCGAAGACACGGTCCTCGAAAAGTGAAAAAACGTGTTCGGAGTGCGGCGAAGAATTCCCCGACACGGCCTCCGCCAGATATCACAAATTTACAGAACATATCGATGTTAAGGAGACGGGAATAGTGTTAGAAGAAGTTGAGGAAATCGAAGAAAGCAACACCTCCATTGCTGAAAAGGAAGTGGAGAAAGATGAACAGATAAAGGAAGAGGGCAATGATTGTGTGGTTATTGGAGAATTCATCATTGAATCACTGCCAGCAGACGCTGCAATTGTGCTGCAGGAGTCGGCAGAAGATTTCCAGATCATACCAAACGACGATGAAGCTGATGCGAAAATTGAAGAGGTCAAGAATCCGAAAAAAACTGTATCCATCGGTTTGAAAGCAGAACTTAGAAAATGCTTAGCCCAACGGCTGCAAGAAGACCAACCAAAGGAAGTCCCCGTGAAAACTATGAGCGCCGATGACCGTGAGATCACTGAGAATGTTAACAAGCTACTGGACATTCTGGTAGATCTGGATACGTTAGAAAAATTCGGATGGCAAAAAGATAGTGTTGAAAATGTACTCTGCAAGGTAATTGAAAACTGCGGATATAACCTGTATAAAACCAAATTTACCGAGGATTATGGTATTCGGATGCGGGAGTACGTTAAACTCTTGTTCACGGTGGTTATTCAAAACGACTCGATCAAGGAGCTCTTGAATAACTATTCCATTGATGAAGTCATTGACTTTGTTCTCTCCAATGATGATAACGAGTGA
Protein Sequence: MKRAAKPVTRGSRLLLNKTKSPPPPKISKKDIIDLELDEADKTNHYLLTEIKGQENEHEIAFVLTTNSTEDGDKPPPAECREEIQIEEACQEEEDEDDDKVSTKEIVEHVCGKCYKSFRTIKVLKRHIKYCIFNSEMDIRKSKMANNIGKIEKEALIMEKKDLCFCCGDSYDTCHLGHVNCPECPKSFNSQIILERHMFLIHSENKDFPCPICNGHIRTERLLKLHIDQHKNRGKPYACKQCGKDFTRQYHLKRHLMYTSCGEGQVETMKCKVCSKEFYRLDNLRVHLKSHLGQKAVRRSEYTCPYCKKSFYSLSTLNIHIRTHTGERPYNCDLCDNNFPSLVALKKHRRYHTGEKPYTCSVCSQTFAVKEILNRHMKRHTGDKAHACDECDKRFIQATQLRNHKRTHLRPFACTQCDEKFKKEKMLEKHMKTHNKSTSRRSTKAKTRSSKSEKTCSECGEEFPDTASARYHKFTEHIDVKETGIVLEEVEEIEESNTSIAEKEVEKDEQIKEEGNDCVVIGEFIIESLPADAAIVLQESAEDFQIIPNDDEADAKIEEVKNPKKTVSIGLKAELRKCLAQRLQEDQPKEVPVKTMSADDREITENVNKLLDILVDLDTLEKFGWQKDSVENVLCKVIENCGYNLYKTKFTEDYGIRMREYVKLLFTVVIQNDSIKELLNNYSIDEVIDFVLSNDDNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -