Basic Information

Gene Symbol
XBP1
Assembly
GCA_905231855.1
Location
HG993125.1:4688291-4689193[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2 2.3e+03 -0.7 0.0 14 24 42 52 40 55 0.73
2 3 3.7e-15 7.2e-12 45.7 10.9 2 52 58 108 58 109 0.96
3 3 3.3e-07 0.00065 20.2 8.6 25 65 95 135 94 140 0.96

Sequence Information

Coding Sequence
ATGAATACTCCAGTTTTTATAACCGTTCCCAAGTACGTTGCAATAACACCAAACCCCCTGACCAGGATCACAGCCATGGAGGTGAACTCCAATTGCGGAAGTTCGTCCTCTTCTTCGGATGAAATCTCTGCTTGCCGTGGAAAGAAGCGACGTCTGGATCATCTATCATGGGAGGAGAAACTGCAAAGAAAAAAGCTAAAGAATAGAGTAGCTGCTCAAACCTCCCGTGATCGGAAGAAGGCCCGCATGGAAGAAATGGAGCAGACCGTAAATGAACTAACAGAAAAGACAGAAATTTTACAAAACAAATGCGATAGCCTTCAAGCTATCAATGATTCACTTTTGGAGAAAAACCAAAAGTTGGATAAGGAAGTCGAGCAACTTAAAGAACAACTTGAACAATTGCAAAGCACACACCAGCGCACCCAACAACCGTCGAATTGTGTTGATTTTGATTCCATTCTCAAAGGATCTGCTGTATCCATTTTTGACCCTCTGCCGCAGGGAATGAAGGAATCACTATCAATGACACAAAACGACAAGCGCAGGTGCCGATCACCCTTCAACGAGAGCTCAGTTGCAGCACTCTGGAAGATTGTAGCGCTTTGCCTTCTCTACAAGACATGTTCGAAGATTTCGACGCCACTAAACTGGAAGAGCTTGCCGAAAGCCTACTCGCAGATATCACTGCAGACATGGAAGGAAGCCATCCAGAGAGCCACCGAGAAGCTACCCAAGATGCAGGCATCGCAGAGCGATTGTCTGGATCAGTGGTGGGGACCACACCAGAAGTCCTGGAATCCAGCAAACATACCAGCCGCGACAATAACAGCATAA
Protein Sequence
MNTPVFITVPKYVAITPNPLTRITAMEVNSNCGSSSSSSDEISACRGKKRRLDHLSWEEKLQRKKLKNRVAAQTSRDRKKARMEEMEQTVNELTEKTEILQNKCDSLQAINDSLLEKNQKLDKEVEQLKEQLEQLQSTHQRTQQPSNCVDFDSILKGSAVSIFDPLPQGMKESLSMTQNDKRRCRSPFNESSVAALWKIVALCLLYKTCSKISTPLNWKSLPKAYSQISLQTWKEAIQRATEKLPKMQASQSDCLDQWWGPHQKSWNPANIPAATITA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00671961;
90% Identity
iTF_00671961;
80% Identity
-