Basic Information

Insect: Eristalis pertinax
Gene Symbol: -
Assembly: GCA_907269125.1
Location: OU026147.1:11080630-11083046[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.001 0.083 13.2 1.6 1 23 184 207 184 207 0.97

2 12 0.0095 0.76 10.2 2.0 3 21 215 233 214 234 0.93

3 12 0.012 0.94 9.9 0.1 1 23 265 287 265 287 0.98

4 12 4.2e-05 0.0033 17.6 1.4 2 23 292 313 291 313 0.97

5 12 0.0084 0.68 10.3 0.6 1 21 319 339 319 340 0.91

6 12 0.0011 0.087 13.1 3.9 2 23 348 369 347 369 0.96

7 12 9.3 7.5e+02 0.8 0.0 6 23 538 556 533 556 0.90

8 12 0.0085 0.68 10.3 2.2 1 23 562 584 562 584 0.98

9 12 0.00049 0.04 14.2 1.6 1 23 589 611 589 611 0.99

10 12 2.6e-06 0.00021 21.4 0.5 1 23 617 639 617 639 0.99

11 12 0.0025 0.2 12.0 4.2 1 23 645 667 645 667 0.99

12 12 0.00029 0.024 14.9 0.7 2 21 674 693 673 694 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.001	0.083	13.2	1.6	1	23	184	207	184	207	0.97
2	12	0.0095	0.76	10.2	2.0	3	21	215	233	214	234	0.93
3	12	0.012	0.94	9.9	0.1	1	23	265	287	265	287	0.98
4	12	4.2e-05	0.0033	17.6	1.4	2	23	292	313	291	313	0.97
5	12	0.0084	0.68	10.3	0.6	1	21	319	339	319	340	0.91
6	12	0.0011	0.087	13.1	3.9	2	23	348	369	347	369	0.96
7	12	9.3	7.5e+02	0.8	0.0	6	23	538	556	533	556	0.90
8	12	0.0085	0.68	10.3	2.2	1	23	562	584	562	584	0.98
9	12	0.00049	0.04	14.2	1.6	1	23	589	611	589	611	0.99
10	12	2.6e-06	0.00021	21.4	0.5	1	23	617	639	617	639	0.99
11	12	0.0025	0.2	12.0	4.2	1	23	645	667	645	667	0.99
12	12	0.00029	0.024	14.9	0.7	2	21	674	693	673	694	0.93

Sequence Information

Coding Sequence: ATGGACAACGTGCTGGCCAATGTTAAGCGTCTCGAATCGCTGCTGGAATGCAATGGAACAATTTTCGAGCGAATCACTCTTGCTACGGAGGAGTTCAAGAAGGTATGTCGCACCTGTTTACGTGAAACGACAGGCAACGACTTGGAGAACTACCTACTCCCGGGCAACGATACCACAATGTCCTTAATTACAATTAGAGAAATCTTGGAAGCAGCAACGGGAGTGAAGATTGAAATCCACGACTGTTTGCCCAATCACATCTGTGATGAGTGCTTGCAATCAGTTAAAATGATCTACAGGTTTCGGATGCAGAGCCAGCAAGTCGACGAGGTACTCAAAGGATTCCTGGTGAACATCGAAATTGATATGCCTGAAGTGCAGACTTCTTCGCTGGTAGTGGGCAAAGTCGATAATCAAGCAGATTCCATAAAATTCGATCGATATCAAGTAACATACCTGAACGAAACTTCCGACACGGCCGATGGTGACGGGGCAGAAATTGATAGTGCAGAGCCCGAGCAGTGCACACCCACGGGAAAGAAGAAACTCTATCGTTGCGGAATTTGTTTCCGAGAGTACACCTTTCGCAATGGGCTGCATGACCACATGCGATTAGCACATGTGCAGAATAAGGAAAAACATTGTCAAACCTGCGGCCGGATGTTTAGGACAACAACACGATTGATGCTACACCAGCAGAGAAATTGTGGACAAGTGAAGGTGCCGGTGGTGTTGAAGGAACCGTGGCAAGCCGCGGTTACCATCAAGGATGACGTGattgaaattaaaaactttcAATGTTCAATTTGTGAGGAGGTCCTCGAACTTGAGAGAGACTTCATGATCCACTTGCAGACGCATACGAATGAGAAGACATGCAAGTACTGCAAGAAGAAAATCTCGCGGGCTGTGAATTTGGAGAATCACGTTCGATCGCATACCAAAGTGCGGCCATATGTGTGTCCACTCTGCTCGAAGGCGTTCACAGCGGCGAAATCCTTGCGCTGCCATCTAAAGTCGTACAACAAGAGGCAAGCAcaaacttgtaagaaatgtggaACAATGTTTTGCTCTTTGAAAGAGTTTCTCAAGCATTACAACGCCCATGTGTCGAATGGGGAGATAGTCGACGGCGAGAACGGTTTGCCTAAAGATGTTGACACTGATTCCAATAATTCTAGCGAAGCAGCAGAAGAAAGTTTCGAACAGCGGAACAAGCAAgacgtcgtggtggctgtgaaACAGGAAGCAGTGGACACGGCTGTCACTGTCACTGTGAAGGAAGAACGAGAAGTCGTTGATCACACGCAGTTTGTCGTCGTGAACGAAGCTCTTAGTGAAGATGATCAGCAGCAATTACTGAACATAACTGAATTCAAAGCCGAACCAGAGGACGTCAGTGAAAGTTTGGATACATTCGCTGATGTGGATGGCGAAAGCGGAACACGCGCGCACACAGCGACTGCTGCCGATACATCGAAGGTTCAGATGCACAGTGTGATGGATGAAGAATCCTTTAATGCGGGAGAAGACGAATTAGATAATTCCACGAGCAACGACGCTCAAGATAAGGGTGTTTCATATGGCACCTTCGGCTGTCCAGACCCGCCTTGTACAATGGAATTCAAGTACTATCGCGATGTAATCAACCACTATACGATTTACCACTGCGACTACGCACCGTTTACGTGCACTATCTGTCAGCTGAAGTGCATGGTGAAAGCAGAACTTCGCCTCCATTTGAAGCAACACATCAAATGCGCCTACAAGTGCCCATACTGTCCACGGCATTACTGGGTGCTGCGTGACTTAAAGAATCACGTTCGCACGCACACCGGCGAACGACCATTCCAGTGTTCCCTGTGTCCGCAAAAGTTTAAGCAGCGGCCTGCTTTAAGGGTTCACATTCAGACACACAACACTAGCAAAGAGTACAAGTGCAAGTACTGCACCAAGGAATTCTTCTCCTACAACGGGATGTTCCTGCACCAGAAGTCGCACATAAAAATCGAGGAGTTGCAGTGCAAGGCTTGCAATAAACAATTTCCAACACAAAGCCGATTGAAACGTCACCTCAGCAGTGTGTGCGGATTGATGATTCCGAAACCGATTACGGACAAGGCACCGAAATCTGAAATCAATGAGATCAATTGA
Protein Sequence: MDNVLANVKRLESLLECNGTIFERITLATEEFKKVCRTCLRETTGNDLENYLLPGNDTTMSLITIREILEAATGVKIEIHDCLPNHICDECLQSVKMIYRFRMQSQQVDEVLKGFLVNIEIDMPEVQTSSLVVGKVDNQADSIKFDRYQVTYLNETSDTADGDGAEIDSAEPEQCTPTGKKKLYRCGICFREYTFRNGLHDHMRLAHVQNKEKHCQTCGRMFRTTTRLMLHQQRNCGQVKVPVVLKEPWQAAVTIKDDVIEIKNFQCSICEEVLELERDFMIHLQTHTNEKTCKYCKKKISRAVNLENHVRSHTKVRPYVCPLCSKAFTAAKSLRCHLKSYNKRQAQTCKKCGTMFCSLKEFLKHYNAHVSNGEIVDGENGLPKDVDTDSNNSSEAAEESFEQRNKQDVVVAVKQEAVDTAVTVTVKEEREVVDHTQFVVVNEALSEDDQQQLLNITEFKAEPEDVSESLDTFADVDGESGTRAHTATAADTSKVQMHSVMDEESFNAGEDELDNSTSNDAQDKGVSYGTFGCPDPPCTMEFKYYRDVINHYTIYHCDYAPFTCTICQLKCMVKAELRLHLKQHIKCAYKCPYCPRHYWVLRDLKNHVRTHTGERPFQCSLCPQKFKQRPALRVHIQTHNTSKEYKCKYCTKEFFSYNGMFLHQKSHIKIEELQCKACNKQFPTQSRLKRHLSSVCGLMIPKPITDKAPKSEINEIN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00673031;
90% Identity: -
80% Identity: -