Basic Information

Insect: Eristalis pertinax
Gene Symbol: -
Assembly: GCA_907269125.1
Location: OU026147.1:5408909-5410993[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 7.5 6.1e+02 1.1 1.1 3 23 89 110 87 115 0.91

2 10 2 1.6e+02 2.9 0.2 2 23 235 257 234 257 0.91

3 10 6.2e-07 5e-05 23.3 1.5 1 23 410 432 410 432 0.98

4 10 0.00069 0.055 13.8 2.0 1 23 438 460 438 460 0.97

5 10 0.0062 0.5 10.8 0.6 1 23 466 488 466 488 0.97

6 10 1.7e-08 1.4e-06 28.2 0.2 1 23 494 516 494 516 0.98

7 10 4.1e-06 0.00033 20.8 0.4 1 23 522 544 522 544 0.99

8 10 0.0031 0.25 11.7 5.2 1 23 550 572 550 572 0.99

9 10 9.4e-05 0.0076 16.5 1.7 1 23 578 601 578 601 0.98

10 10 8.4e-06 0.00068 19.8 0.5 1 23 646 669 646 669 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	7.5	6.1e+02	1.1	1.1	3	23	89	110	87	115	0.91
2	10	2	1.6e+02	2.9	0.2	2	23	235	257	234	257	0.91
3	10	6.2e-07	5e-05	23.3	1.5	1	23	410	432	410	432	0.98
4	10	0.00069	0.055	13.8	2.0	1	23	438	460	438	460	0.97
5	10	0.0062	0.5	10.8	0.6	1	23	466	488	466	488	0.97
6	10	1.7e-08	1.4e-06	28.2	0.2	1	23	494	516	494	516	0.98
7	10	4.1e-06	0.00033	20.8	0.4	1	23	522	544	522	544	0.99
8	10	0.0031	0.25	11.7	5.2	1	23	550	572	550	572	0.99
9	10	9.4e-05	0.0076	16.5	1.7	1	23	578	601	578	601	0.98
10	10	8.4e-06	0.00068	19.8	0.5	1	23	646	669	646	669	0.96

Sequence Information

Coding Sequence: ATGATGGACGCCATGCTCGAGCATGTGCCCATCAAGTTGGAGGCATTcgacgaggaggaagaggaggatcACAAATTCGGCAAGTGCGCGGTCTGGAAGGCATCGACGAAGACGGAATCGGCGCAGACGATCGACGAGGCGAAGCCAGTGCCGAGTGCCGGCAGCAGTGCGTCCTCCAGCTCGTCAAGGACGGCCAATCTGGAGAACGAAATCGAGAGTTGTGGGAACGTATTCATCTTGAACCGGCGCAAGTTGTTTCTGATCTGCGGCTTCTGCGAGAGTAAGTATGCGAACATGTTGCAGTTCTCCAAGCACTTGAACGACTGCCATTCGATATTCTCGACGAGCTACGTCGACGCCAGTCTGGGGCGCAGCAtctgtggcggtggcggtggcggtgtagTGTCCGAGGCAGAGAGCGACTCGGACGCGTCCGCCATGACATCGGGGCTGATTGTGAAGGGTGGCTTTCAGATTCGCTTCGTTAGGGAAGGTTCGCTTCCGCCGGGCACGGCGAGCATAGCATCGCTGCCCACGCCGCCGCCCTCGATTGATGACACTCTGCTGAAACATGTGCCGATCAAGGTGGAGGAGGAGACCGACGACGATGTCATGCTGGTCGACGAGAGTTCAACGAATTTCGACGAGAACATCGAGAGCTGCGGCAACATATTTGTGATGAACCGCAGGAAGCTGTTCCTCATCTGCGGCTTCTGCGAGAGCAAGTATgccaacatggagctgctcgcCGTGCACCTGCACGAGAGCCACACAATCTTCCAGGAGGACAAGGAGGACATTCCAGTGAAGGATGCAGTTGCCGTTACGGTGAAAGCGGAACCGGAAGAGAGGCCCTGCTCGCCAGTGAAGTGCCGCGACGCGAACAACGAGGATGCTCCGCCTATGGTGGCTCTGCCAAATGGCACAAGCGTCGACAACGAAGACATCATTCCACAGGAAGAAGTGACCACATCGAGGCAGTCAGCTGTAGCTCCCGCAGCGGCCAAGGAGAAGAAGGACGAGAACGCCATCAAAGCAGCTACACCCGACGACGAGATCATCAAGCTGGCAGTCGTagcagccgccgccgcagcagcagcagcagccgcatcagcagcagccaagGACAAGAAAGTTCTGAAGGAGAGCCGAAAGCAACGACGAACGAAGCGGCCGACAAAATCGATCAAGGACTACTTCTGCAAGAAGGAGAATCAGCCCACAATCTTCACGTGCAAGGACTGCCCGAAGACGTTCACCAAAAAGTCCCGCCTGGTGGAGCACATTCGCCTGCACACCGGCGAGAAGCCCTTCAAGTGCAGCGAATGCGACAAATCATTCCGAATCAAGCTGCGCATGACCGAGCATCAGCTGCGTCATCGCGCGGAGAAGGCGTTCATCTGCGAAATATGCGGCCTGGGTCTGGCCACACGTCAGGACTACTACTTGCACCAGCGCCACCACAACGGCGACAAGCGTTACGCGTGCAGCGAGTGCGGCAAGGCCTTCGTCCGCAGCAGCGATCTCAAGACGCACCTGCGCATCCATTCCGACGAGCGTCCGTTCAAGTGCCAGATCTGCGATCTCTCATTCCGTGCCAATCAGAACCTCATCATTCATCGGCGAGTCCACGAGGGCGACAAGCAGTTCAAGTGCGACTACTGCGACAAGCGTTTCCTCCGGAAGATCGACAAGCGCGTCCATCATCGCACGCACACCGGCGAGAAGGCGTTCAAATGCGAAATCTGCGACCGCGGCTACTCGGCCAAGGTGCATGTGCGGCGACACATCCAGAAGCGACACATGGATCCGCTGCTGAATGCCGCCAGTgctaccgccgccgccgccggtgccgccgccgccaccagtGAAGACGTCAAGACGGGTGTCAAGAGCAAAAAGCACGCAAAACCCGCCAAGAAACAAGGCAAATCGTTCAACTGTGACTCCTGCCCCAAGTCATACTCCACGAAGGTAACTCTTCAGAAGCATATCGCCCGAGTCCACAGCAACGCACCGGTCGACGTCGACGAGAAGAAGCCGCTCCCATCGAAAGTGGAATCGCCAGAAGTTGCCACCAACTGA
Protein Sequence: MMDAMLEHVPIKLEAFDEEEEEDHKFGKCAVWKASTKTESAQTIDEAKPVPSAGSSASSSSSRTANLENEIESCGNVFILNRRKLFLICGFCESKYANMLQFSKHLNDCHSIFSTSYVDASLGRSICGGGGGGVVSEAESDSDASAMTSGLIVKGGFQIRFVREGSLPPGTASIASLPTPPPSIDDTLLKHVPIKVEEETDDDVMLVDESSTNFDENIESCGNIFVMNRRKLFLICGFCESKYANMELLAVHLHESHTIFQEDKEDIPVKDAVAVTVKAEPEERPCSPVKCRDANNEDAPPMVALPNGTSVDNEDIIPQEEVTTSRQSAVAPAAAKEKKDENAIKAATPDDEIIKLAVVAAAAAAAAAAASAAAKDKKVLKESRKQRRTKRPTKSIKDYFCKKENQPTIFTCKDCPKTFTKKSRLVEHIRLHTGEKPFKCSECDKSFRIKLRMTEHQLRHRAEKAFICEICGLGLATRQDYYLHQRHHNGDKRYACSECGKAFVRSSDLKTHLRIHSDERPFKCQICDLSFRANQNLIIHRRVHEGDKQFKCDYCDKRFLRKIDKRVHHRTHTGEKAFKCEICDRGYSAKVHVRRHIQKRHMDPLLNAASATAAAAGAAAATSEDVKTGVKSKKHAKPAKKQGKSFNCDSCPKSYSTKVTLQKHIARVHSNAPVDVDEKKPLPSKVESPEVATN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00673014;
90% Identity: -
80% Identity: -