Eper011449.1
Basic Information
- Insect
- Eristalis pertinax
- Gene Symbol
- Zbtb41
- Assembly
- GCA_907269125.1
- Location
- OU026149.1:1468830-1475645[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.45 36 4.9 1.0 1 23 22 45 22 45 0.96 2 18 6.5e-05 0.0052 17.0 1.5 1 23 55 77 55 77 0.99 3 18 0.022 1.8 9.0 2.8 1 23 99 121 99 121 0.96 4 18 0.00019 0.015 15.5 0.2 1 23 127 149 127 149 0.98 5 18 3.1e-05 0.0025 18.0 3.5 1 23 155 177 155 177 0.98 6 18 0.024 1.9 8.9 4.0 1 23 183 206 183 206 0.92 7 18 1.3e-05 0.0011 19.2 3.3 1 23 212 235 212 235 0.98 8 18 7.7 6.2e+02 1.0 0.1 1 16 371 386 371 388 0.74 9 18 0.0047 0.38 11.1 0.6 3 23 530 550 528 550 0.95 10 18 0.29 23 5.5 3.5 1 23 555 577 555 577 0.97 11 18 1.2e-06 9.9e-05 22.4 1.7 1 23 584 607 584 607 0.97 12 18 0.00013 0.011 16.0 0.1 1 23 613 635 613 635 0.98 13 18 0.00056 0.045 14.1 6.2 2 23 642 663 641 663 0.97 14 18 0.19 15 6.1 6.7 1 23 687 709 687 709 0.98 15 18 0.00045 0.036 14.4 3.4 1 23 715 737 715 737 0.98 16 18 1.4e-05 0.0011 19.1 5.1 1 23 743 765 743 765 0.98 17 18 6.5e-07 5.2e-05 23.3 2.3 1 23 771 793 771 793 0.98 18 18 0.013 1 9.8 3.0 1 23 799 821 799 821 0.98
Sequence Information
- Coding Sequence
- ATGGTATTTTCGGTTAAATTCGATTTTAAAATGCACAAGAACCAACATGAGGGAAAAGAAGTCTTTCAGTGCGATGTGTGCAAGGCTTACCTGTCCAACAGTAAAATCTTAACGGATCACAAAAAGAAACTCCACAGCAACACTACCAACAAAGACAAGAAATTCCGGTGCTCAATTTGCGGAGAGCGTTTTTCACTTCAAGTGTTCCTGAGCAATCACAAGAAAACCCACACTGAGTATATTAGCCAACTACAAGCAACAGCAAATATAAAGAGAGTCAACGGGCGGTTAAAATATATATGCAAGACTTGCGGCAAAACATCAACCAATAAAACCCGGCATGAAGAACACCTTAGAGTTCACACCAAGGAGCGCCCATTCAAGTGCACCATGTGTGCGGCGAAATTCACAGCGGCAAGTTCATTGGTTATACACATGAGACTTCATTCAGATGAGCGGCCATTTAAATGCGAGATATGTAGTGAAACCTATCGCCACAAGAAGAATCTCGGACGACATCTGCTCAAGCACAGTGGGCAGCGTCCATTCAAATGTCGGTACTGCGGCAAAGCATTTTCCCTAAACTGCACTAAAATGGACCATGAGCGGCTTAAGCATACAGGGGAGACGCCCTATCAGTGTGAGAGCTGTGACCAATGCTTTAAAACTTCATTCCTGCTCAATGCTCATCGACGGTCAGAGCATGATATCGTCACTAACCGCAAGCCTCGAATCGAGGAAAGCGGTGAGATTTCGGAAAATATTTGTTGGGACTGTGAGGATACATTGCTGGGCTTCAACAAAAGTGTTGGTGGAGACAACGAAGACGAAGAGGAacctgttgttgttgatgacgACGAGATACTTTATAAAACCTTGGAAAAAACAAGACGCTTCCATCGGACGTCGAAAGAAGTCGAAATCATTCAAATTGACTCATCCGATTCGGAACATGAGGAGCGGGTGATAGTCCCAAAGGAAGACGATACTGTTAAGGTCGAGGCCGCCAACACTGTTGTTGAGAGTTCAAAGAAAAGTAGTCCGATCGATATAATGGACACTAAAGCTATTGCAGAGAAAAAGATTGACGCTCGGGATGATTTGCCGAAGTACGTGTGCAATGTTTGTGAGCAGGGATTGGCGTTCTCCTATAGGCTTCGAAAGAAGGGCGAAGAAACGGAAAAGAAACTTCGACAAGAACTACTATTAACAAAAGCAGAGGAAATATACTCTCTGGAGGAGGTGGATGAAGATGTTAAGGAAGACGTATGCTATGATCAAATGTGGATATCTTGTGATACAGATGCTAAACTTGATCAAGACGAATTTATTGAAGACATTGAGGATGCTGTGGAGATCTTAGACATCATACCCAAGGAAGAATGTGATGAAAATGAAGAGTGGATTTTACAACATGAAGATTTCATTGAAACCAGCGATATAATCGAAGACGTTGATGTGGCGAAGGTAGATGGGAAtcttttggaaattatttctGCAAAAAGTTTGGCAAATGAGGCTAATGAGGCGCATGAATCTGAGTTACAGATCTTGACGGACAGAACACCGAGGAAGATGCAAATCAACTGCGTAACCTGTGGCGAAGTTTTTCAAAGTAGGCAAGAGTATTGTGAACACATAAAGGGGCACGGAGACAAGCGGTATCACTGTGAGATCTGTGATAAATGGTTTAGTGTTCGCTATCGTTACGATACGCATAGGAAAAATCACAACAGCGAGAAGGGCGCCTTCCCTTGCCCAAAATGCACCAAAACGTACACAGTGCAGTGCAATCTGGAACGCCACATACGATCAGCACACAATGGAGAAAAGAGATTTCAGTGTTCCGAATGCGGAGCGAACTTTGGACGTGCAGATGTACTAAAGATGCACATGGTTAAGCACAGCACTGAAAGGAACATTGAATGCGATATCTGCCAAAAGAAATTTAAAACATCACAGCATCTGCACTATCACAAAAAGAGCCATCAGGAGAAAGCCGAGCGACCCAAAAAGCCGGTGCGATTGAAAACCAAGCCGAAACCAAAAGTCTATGAGTACGTCTGCGAGTATTGCGATAAGGTTTCCCATCACAGGACCACTCATTTAAATCACATACGAACGCATACCGGCGAGAAACCGTTCAAGTGCACAACATGTGATAAGGCGTTCCGTACAACGCACGCCAGAAGTAATCATATGCTCCTGCACACAGATGAACGTCCGCACAAGTGCAAGGTCTGCAGCATATCATTTCGACAGACGTCCCACCTTAAGTCGCATATGCTTATACATACAGGAGTGAAGGGGCATGTTTGCCAATACTGCCAAAAAGCGTTTACAATGAAGAGCAATCTGATGGTCCACCTGAGGATGCACACCGGAGATCTGCCATATAAATGTGATAATTGTCCGCAGAGATTTCTTCAACTGAGTCGTTTCAAACGGCACAAAATGAGCCACAAGAGCAAGGATGCACAGCAGAATGAGACTGGTAGTGGCAACGAAAACGATTTGGCAGATGATTACACTGACTCTCAGATCAATGTGTATGTTGAGGAAATCGAGAGCAGCTGA
- Protein Sequence
- MVFSVKFDFKMHKNQHEGKEVFQCDVCKAYLSNSKILTDHKKKLHSNTTNKDKKFRCSICGERFSLQVFLSNHKKTHTEYISQLQATANIKRVNGRLKYICKTCGKTSTNKTRHEEHLRVHTKERPFKCTMCAAKFTAASSLVIHMRLHSDERPFKCEICSETYRHKKNLGRHLLKHSGQRPFKCRYCGKAFSLNCTKMDHERLKHTGETPYQCESCDQCFKTSFLLNAHRRSEHDIVTNRKPRIEESGEISENICWDCEDTLLGFNKSVGGDNEDEEEPVVVDDDEILYKTLEKTRRFHRTSKEVEIIQIDSSDSEHEERVIVPKEDDTVKVEAANTVVESSKKSSPIDIMDTKAIAEKKIDARDDLPKYVCNVCEQGLAFSYRLRKKGEETEKKLRQELLLTKAEEIYSLEEVDEDVKEDVCYDQMWISCDTDAKLDQDEFIEDIEDAVEILDIIPKEECDENEEWILQHEDFIETSDIIEDVDVAKVDGNLLEIISAKSLANEANEAHESELQILTDRTPRKMQINCVTCGEVFQSRQEYCEHIKGHGDKRYHCEICDKWFSVRYRYDTHRKNHNSEKGAFPCPKCTKTYTVQCNLERHIRSAHNGEKRFQCSECGANFGRADVLKMHMVKHSTERNIECDICQKKFKTSQHLHYHKKSHQEKAERPKKPVRLKTKPKPKVYEYVCEYCDKVSHHRTTHLNHIRTHTGEKPFKCTTCDKAFRTTHARSNHMLLHTDERPHKCKVCSISFRQTSHLKSHMLIHTGVKGHVCQYCQKAFTMKSNLMVHLRMHTGDLPYKCDNCPQRFLQLSRFKRHKMSHKSKDAQQNETGSGNENDLADDYTDSQINVYVEEIESS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -