Eper011599.1
Basic Information
- Insect
- Eristalis pertinax
- Gene Symbol
- -
- Assembly
- GCA_907269125.1
- Location
- OU026149.1:5247746-5264559[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0036 0.29 11.5 0.8 1 23 427 450 427 450 0.93 2 19 0.00014 0.011 15.9 0.3 1 23 455 477 455 477 0.99 3 19 8.6e-05 0.0069 16.6 0.3 1 23 485 507 485 507 0.96 4 19 0.00098 0.079 13.3 0.4 1 23 515 537 515 537 0.97 5 19 0.0052 0.42 11.0 1.0 1 23 858 881 858 881 0.95 6 19 0.00014 0.011 16.0 0.2 1 23 886 908 886 908 0.99 7 19 0.00053 0.043 14.1 0.4 1 23 916 938 916 938 0.96 8 19 0.00093 0.075 13.4 0.1 3 23 948 968 946 968 0.97 9 19 0.00018 0.014 15.6 0.4 1 23 974 996 974 996 0.97 10 19 0.013 1 9.8 5.9 1 23 1002 1024 1002 1024 0.95 11 19 0.0022 0.17 12.2 5.4 1 23 1029 1051 1029 1051 0.98 12 19 0.0045 0.36 11.2 3.9 2 23 1062 1084 1061 1084 0.96 13 19 0.00037 0.03 14.6 3.3 1 23 1430 1453 1430 1453 0.96 14 19 0.018 1.4 9.3 0.2 1 23 1458 1480 1458 1480 0.97 15 19 0.0053 0.43 11.0 0.2 1 23 1488 1510 1488 1510 0.93 16 19 4.6e-05 0.0037 17.5 0.7 2 23 1519 1540 1518 1540 0.97 17 19 0.00068 0.055 13.8 0.1 1 23 1546 1568 1546 1568 0.95 18 19 0.00095 0.077 13.3 0.3 2 23 1575 1596 1574 1596 0.96 19 19 0.00054 0.043 14.1 4.2 1 23 1601 1623 1601 1623 0.93
Sequence Information
- Coding Sequence
- ATggattcaatttcaaaatttaataataGAGTTAAACCTGAGAGCGCTTACGACATTAAAACCAAATGCGGCGACATATTGATATCGTTTAAAACATTCAAGTTCGAGTTTGCTTGCACTCTTTGCGATGAAGGGTGCACGTATTTATCATTCTACGAGTTATATGATCACGTGACAAAGGAGCACAACTTCTACTCGGAGAAAGGAGATCCCGCAATAAAGCTAATAGGCAACTATGGCACGGAGATCGAGGACCCTCTGGCAGAGAAGATGTCTGATCTGGATGAAGAAGAAtacgaaattgaaattgaatacgAAGATGGAGGCGAAGGAGATGTGAACCTTAATCTCAGTCCCATAGAAACTGATGAACCGCCTGACGAGTTCGACAGTGCAACAGATGTCAGCACAAAAGACGAAACATTCACCGAAAGTTGGGACAATAGCCTCCATCAATGCAGTACCAAAGAGTGTAAGGAAGAGGACCCAACCAGGCGACGGCGTATCATTAAACTGATTGAAATGTATCGCAAATGCCTTGGGCTATGGCATACAAAAACAGCGAACCGTACCTCTGTTACGTTGAAGACTGCCGCTCGTAGGCTTTTGACACAAAAGTACGACACCAGCCTCCCGGTGCATAAAATGCGAGTTTTGCTGTTACGCATGACGAACTGTTTCAATAAAGAGTGGAAGAGCAATTCCAGGAGCAACTCTAGGCCATGGTATTTCAATAACATGAGTTTCCTGAGGCTTGCCGATGTCGATGTGATTCCGGATGAAGAATTCGACGACTTTCAGTGTCCATTTTGTGCGAATGACGAGATGAATCATTCCGGCTCAATGGAGCTTTGGAAACATATAACTGAATACCACAAAAGCCTAGCCCATTTAGTGAAGTCGGAGTCAACTTCGTACATTATGCTGTGGCCAACAGAGGACATACTTCAGTTCATCCGCATCTATCGGGAACAAGAAAGCTTGTGGAACAACAAATCTCCAGAATATTACAACCGCCCACACAAGGTCAAAGCGTATGAGACGATCATAGAGAAGTTCAACAAGATCCGCCCGAACGCGTTAAAAAAACGAGAGTCTGTCGTTGAAAGTATTAGAATTCTACGAGTGTTCTTTCGACGTGTTGACAAAAAGTACCAAGTGAACAATCTGCTGGAAAAGCCCGAGACCACTGAAGAGGTCGAGAATTATAAAGTGTACGAAGAACTTCTATTTCTCAAAGACGTTTTAATTAATAAACAAGCGCATTTTACGGAAACATACACATGCGATGTGTGCGAGAGAACTTTCAAAAATAAGAGTATCATCATCGAACATTACAAAATGCAGCACAAAGATTCGCCATTTAAATGCAGCGTATGCCCGATTGCTTTCGGCTCAGAAGAGAAACTCAAATCCCATCAGAGCACCCACGAAGAAGGTGATGGCAAAGCATACACTTGTCCAATCTGCAATATGAGTTATTCGAATTCAAACGATTTGGATACACATCTCTCCGACCACCTTCCGAAAAGATCGGATGTACACATTTGTGAAATCTGCGGATCCAAAATCAAAGATCGCGGCAACCTTCTCATTCACCTTCGACGCCACTGCGACATAAAGAACTATATGTCTGACCTGTatgaagatgaagaaggaaTTAAAATTGAACAAGATGAAGATGTGGACCTTAACTTCAGTCCGATAGAAAGTGATGAACCCCCTGACGATGACAGCACCAGAGATGAAACATTAATCGCAAGTAGCGCCAAGAAGTGTAAACAAGATGACATTGCCAGCCAGCAGAGTCTTGTTGAACTGATTGAAATGTATCGCAAATGCATTGGGTTGTGGCATACAAAAACAGCGAACCGTACCTCTGTTACGTTGAAGACTGCCGCTCGCAGACTATTGACACTAAAATACGACATCAACCTCCCGGTGCATAAAATGCGAGTTTTGCTGCTACGTTTCAATAAAGAATGGGAATGCAGTAACAGGAGCAATTCTAAACCATGGTATTTCAACAACATGAGCTTCCTAAGGTTTGCTGATGTCGATGTGATTCCGGATGAAGAATTCGACGACTTTCAGTGTCCATTTTGTGCGAGTGATGAAGTGAATCATTCCGGATCCATGGAGCTTTGGAACCATATCATTGAATATCACAAAAATGTTGGAAATTTAATGGAATCAGAGTCAAATTCGTATATTATGCTATGGCCAACAGAGCACATACTTCAGTTCATCCGCATCTACCGAGAAGAAGAAAGCATATGGAACAATAAGTCCCCAGAATATTACAACCGCCCGCACAAGGTCAAAGCGTATCAGATTATCATAGACAAGTTCAACAAGATCCGCCCGAACGCGTTGAAAAATCGACAGTCTGTCGTTGAAACAGTCAGAGTCCTTCGGATGTTCTTTCGACGCGTTGACAAAAAGTACCAAGTGAACAATTTGTTGGAAAAACCCGAGACCACTGAAGAGATTGAGAACTATGGCGTCTACGAAGAACTTCTATTCCTCAAAGACGTTTCACTTACTCAACAAGCCCATTTTACGGAAACCTACACATGCGATGTGTGCGAGAGAACTTTCAAAAAGAAGAGTATCATTATCGAACACTACAGAATGCAGCACAAGGATTCACCATTTAAATGCGGCGTATGCCCGATGGTTTTCGGCTCAGAAGAGAAACTCAAATCCCATCAGAGCACCCACGATGAAGGCGATGGTAAATCGTACACTTGTCCAATCTGCAAAATGAACTATTCGAATTCGAACGACTTGGATACACATCTCTCCGACCATCTGCCCAAAAAGACGGACGAACAAATTTGTGAAATCTGCGGATCCACAATCAAAGATCGTGGCAATCTTCTCATACATCTACGACGCCACTGCGACATAAAGAACTACGTATGTGAAATTTGCCAAAAGCGATTTGTTACGTCGAGTGAAAAGAGGTTACATTTGGGCATGCATAGCGACGGGAAGCCGTTCATATGTTCGTTTTGTGGTGTTGGGTTCAAGTATCGCCACCATCTAACTCATCACAATCTCATTCACACAGAGCCGAGATTCAAGTGCAAGCATTGCGGTCTGAAGTGCTCGACAAAGATTTACTTGATTGAGCATGAAAAATCACACGCATATCCAGATGTGCCCTTGGAAAAGATTGTCTGTGAACTGTGTCATAAACTATTTGGAAACACTCACTCTTTGCAGCGGCACAAGCGAAAAGTGCACAAGCTCAGGAAGAGAAACGTCTGCGATAAAGTGTCTGTTGGTGATGAAGAGAGAATAAGTAGTGAAGATGAATGTGATGAAAGGAGCATAAATCCGGCAGAAGCCTATTACCCTCCTAAAGTTACTTTTTACAATGCAGAAGAAGTTGCGAGTGTAGTCAGTCAAAGAGATACTGTAACATTCACCCAACGCGTTTCTCCGAATAAGAATCACGACCATCGCAAGCGGTCTAAAGAGGGAGACACACCCAACCGCCAGCATATTATTGAACTGCTTGCAATTTATCGCAAATGTATCGGCCTGTGGCATACAAAAACAGCAAGCAACATCTCAAATTTACTGAAGACTGCTACGTTCAAGCTTTTGGTTAGGAAATATAAAACCCGCTCGTCGGTGCTTGAAATGCAAAGGTTGTTGAAGCGCATGACGATGTGTTTCAATGCAGCATGGAAGACAAATGCTGAGAGTGATTACAGGCCATGGTATTACGACAGCATGGAGTTCCTGAAGTTCGCCGATCTTGCGGTGATCCCAGAGACAGAATTTGCCGACTTTCAGTGTCCATTTTGTGCGCAGGACGAGATAGATGCATCCGGCTCAATGGAACTTTGGAAACATATAATTGAGTGCCATACAAAATCGGACTGTATAGTTGATTCAGGGACAAATATTATACCCCTGAAATGGCCAACAGAGCACATACTGCAATTCATCCGCATCTACCGAGAAGAAGAAAGCCTGTGGAATATCAAGTGTCGCCAATATCATAACCGCTCACTCAAGGACAAATCGTATCAGAGGATCGTAGACAAATTCAACAAAGTCCGCCCGAACGTCTTGAAAAATCGGGACTCAGTCAAGGACACAATCAAGCAACTACGCGACTACTACCGCCGCGTTGACAAAAAGTATCAAGTGTCCAATCTGTTGGACAGAACCGAGAACACTGAGACTGTTGAGAACTACAGAGTCTACGAAGAACTTCTCTTTCTTAAAAACGTGTACTTGCCTAAGCACATACATTCCAAAGAAACGTACACCTGTGACCTGTGTGGGAAAACGTTCAGGAGGAAGGCTCTCATCCACGAACATTTCAAGAGGCAACACAAAGATTCAGCATTTAAATGTGACAAATGCCCGATGGCTTTCGGCTCTGAGGCGAGACTAGATTCCCATCGGAGCAGTCACAATAGAGGCGATGGCACGACACACAACTGTCCCCTCTGTCCTGCGGATTATCCGAATTCAAGTGATCTTGAGACACATCTCTTCGATCACCTGCCCAATAAATTGGACGAGCAAGTGTGTGAAATTTGCGGAGCAAAATTTGAAGAACGTCATAATCTGCTCAACCACATACGACGCCACAGCAACATAAAGAACTACGTTTGTGACGTTTGCCAGAAGGGATTTGTGACGTCGACTGAAATGAAGTCTCACGCAGTCGTGCATAGCAACGAGAAGCCAATTACTTGTGAGGTCTGTGGGCTGGGGTTCAAATACCAGAATCGTCTGACCACTCATCGTCTCGTCCACGAGgagccgaggttcaagtgcaagCATTGCGACATGAAGTTCGTCACAAAGAGGCACCTGAGTGTGCATGAAGACGCACACACTTATTCAGGTGTGCCTTTGGAAAAGGGTGACTGTGAATTGTGCCATGCTCTAATTGGGAGCTCCGAATCGCTGGCAGGAAATGTGCGCAGCATCAGAAAGAGGAACATATGCGATTACTCGGAAGATGCGAACAGTCAAAATATCCATAAGAAGCTAAATAAAGATTAG
- Protein Sequence
- MDSISKFNNRVKPESAYDIKTKCGDILISFKTFKFEFACTLCDEGCTYLSFYELYDHVTKEHNFYSEKGDPAIKLIGNYGTEIEDPLAEKMSDLDEEEYEIEIEYEDGGEGDVNLNLSPIETDEPPDEFDSATDVSTKDETFTESWDNSLHQCSTKECKEEDPTRRRRIIKLIEMYRKCLGLWHTKTANRTSVTLKTAARRLLTQKYDTSLPVHKMRVLLLRMTNCFNKEWKSNSRSNSRPWYFNNMSFLRLADVDVIPDEEFDDFQCPFCANDEMNHSGSMELWKHITEYHKSLAHLVKSESTSYIMLWPTEDILQFIRIYREQESLWNNKSPEYYNRPHKVKAYETIIEKFNKIRPNALKKRESVVESIRILRVFFRRVDKKYQVNNLLEKPETTEEVENYKVYEELLFLKDVLINKQAHFTETYTCDVCERTFKNKSIIIEHYKMQHKDSPFKCSVCPIAFGSEEKLKSHQSTHEEGDGKAYTCPICNMSYSNSNDLDTHLSDHLPKRSDVHICEICGSKIKDRGNLLIHLRRHCDIKNYMSDLYEDEEGIKIEQDEDVDLNFSPIESDEPPDDDSTRDETLIASSAKKCKQDDIASQQSLVELIEMYRKCIGLWHTKTANRTSVTLKTAARRLLTLKYDINLPVHKMRVLLLRFNKEWECSNRSNSKPWYFNNMSFLRFADVDVIPDEEFDDFQCPFCASDEVNHSGSMELWNHIIEYHKNVGNLMESESNSYIMLWPTEHILQFIRIYREEESIWNNKSPEYYNRPHKVKAYQIIIDKFNKIRPNALKNRQSVVETVRVLRMFFRRVDKKYQVNNLLEKPETTEEIENYGVYEELLFLKDVSLTQQAHFTETYTCDVCERTFKKKSIIIEHYRMQHKDSPFKCGVCPMVFGSEEKLKSHQSTHDEGDGKSYTCPICKMNYSNSNDLDTHLSDHLPKKTDEQICEICGSTIKDRGNLLIHLRRHCDIKNYVCEICQKRFVTSSEKRLHLGMHSDGKPFICSFCGVGFKYRHHLTHHNLIHTEPRFKCKHCGLKCSTKIYLIEHEKSHAYPDVPLEKIVCELCHKLFGNTHSLQRHKRKVHKLRKRNVCDKVSVGDEERISSEDECDERSINPAEAYYPPKVTFYNAEEVASVVSQRDTVTFTQRVSPNKNHDHRKRSKEGDTPNRQHIIELLAIYRKCIGLWHTKTASNISNLLKTATFKLLVRKYKTRSSVLEMQRLLKRMTMCFNAAWKTNAESDYRPWYYDSMEFLKFADLAVIPETEFADFQCPFCAQDEIDASGSMELWKHIIECHTKSDCIVDSGTNIIPLKWPTEHILQFIRIYREEESLWNIKCRQYHNRSLKDKSYQRIVDKFNKVRPNVLKNRDSVKDTIKQLRDYYRRVDKKYQVSNLLDRTENTETVENYRVYEELLFLKNVYLPKHIHSKETYTCDLCGKTFRRKALIHEHFKRQHKDSAFKCDKCPMAFGSEARLDSHRSSHNRGDGTTHNCPLCPADYPNSSDLETHLFDHLPNKLDEQVCEICGAKFEERHNLLNHIRRHSNIKNYVCDVCQKGFVTSTEMKSHAVVHSNEKPITCEVCGLGFKYQNRLTTHRLVHEEPRFKCKHCDMKFVTKRHLSVHEDAHTYSGVPLEKGDCELCHALIGSSESLAGNVRSIRKRNICDYSEDANSQNIHKKLNKD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -