Eper003442.1
Basic Information
- Insect
- Eristalis pertinax
- Gene Symbol
- -
- Assembly
- GCA_907269125.1
- Location
- OU026145.1:125142756-125146559[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.0052 0.42 11.0 1.5 1 23 17 39 17 39 0.98 2 27 7.9e-06 0.00064 19.9 1.6 1 23 46 68 46 68 0.98 3 27 4.4 3.6e+02 1.8 0.2 2 23 98 120 97 120 0.80 4 27 0.00076 0.061 13.6 0.9 1 23 191 214 191 214 0.94 5 27 0.00055 0.045 14.1 1.6 2 23 283 304 282 304 0.98 6 27 0.042 3.4 8.1 2.0 1 23 309 331 309 331 0.96 7 27 0.49 39 4.8 0.4 2 23 344 365 343 365 0.95 8 27 0.0014 0.11 12.8 0.3 1 23 440 463 440 463 0.95 9 27 2.3 1.8e+02 2.7 1.7 1 19 472 490 472 492 0.94 10 27 0.0054 0.43 11.0 3.3 1 19 501 519 501 522 0.95 11 27 0.0027 0.21 11.9 3.4 2 23 533 554 532 554 0.98 12 27 2.7e-06 0.00022 21.3 0.9 1 23 561 583 561 583 0.98 13 27 1.7 1.4e+02 3.1 1.1 2 23 614 635 613 635 0.94 14 27 0.0096 0.77 10.2 2.5 1 23 715 738 715 738 0.96 15 27 0.013 1 9.8 1.5 1 23 775 798 775 798 0.96 16 27 3e-05 0.0024 18.1 0.7 1 23 836 858 836 858 0.98 17 27 0.00061 0.049 13.9 2.1 2 23 882 904 882 904 0.97 18 27 0.0017 0.13 12.6 1.1 1 23 945 968 945 968 0.95 19 27 0.35 29 5.2 1.6 1 22 975 996 975 996 0.96 20 27 0.32 26 5.4 1.6 1 23 1005 1028 1005 1028 0.91 21 27 0.002 0.16 12.3 2.1 1 19 1034 1052 1034 1053 0.97 22 27 7.9e-06 0.00063 19.9 1.1 1 23 1064 1086 1064 1086 0.98 23 27 1.1e-05 0.00087 19.4 0.3 2 23 1105 1126 1104 1126 0.95 24 27 0.00014 0.011 15.9 4.3 1 23 1132 1154 1132 1154 0.99 25 27 2.2e-08 1.8e-06 27.9 2.5 1 23 1160 1182 1160 1182 0.98 26 27 1e-06 8.4e-05 22.6 2.7 1 23 1188 1210 1188 1210 0.99 27 27 0.00015 0.012 15.9 0.2 1 23 1216 1240 1216 1240 0.93
Sequence Information
- Coding Sequence
- ATGAACACTCGCAGTCAGAGTAAAACCCAGAAAAACAAGACCGGTCGCTTTGAATGCGACTCTTGTTCGAAAACATTCGCTTGGAAAAAAGATTTGTACCGACATGAGCGGTATCATGAGCCGAATATCAAAAAGTTTCCCTGCCCACATTGCGAGCGTCGGTTCATACGCAAGGATAAGCTTTCATCACATCTTCAGGTGCATTTGGCCGTTCAGAACAAAGCGAACACATTGAAAAGTTTTCAGTATTTCGCGTTCAATCTCTTCTCGGAAAAGAAATTCACAGAAATAAAATGCATGATTTGCAATGCGGACAACTTCTCGAACGTCCGTGAACTACGACAGCACATTGTGCAGCATCTCAGCAATCTGGAGTCAGTGGACGACATAACAAACAGTCTTGTTGTGGAGAGGTTTTTCCCTAACATGGATGTGAAGGACGTATTGCCCATTTtgaaggaggaaattgaaaaaaaggaattcGGGAAGTTCCACTCAATAGTTAATGGGCATAGTTTCGAAATGGGAATCAGCGATTCTGATGAGAGTGATCCAGATAACGTGAAGCGCTACATTTGTGAAGTCTGCGCGGAATCGTTTAATAGAAAACACAAGCTGATGATGCATCAAGCGTACGAGCACACATTCGACGAGTGTCCGTATGAATGCAAAACGTGCGAACTGAAATTTACTTGTAAGGAAATATTCCAAAGTCATCGCAAGCAGTATTGCGAAAATCCCGACAGGGAATTCCTCTGCAAATATTGCCCCGGACGATTTATTTGGCCAGAGAACAGCATGAAGCACAAATGCAGAAAGAAATACATCACACAAAAGGAGAAGAACAAATGCAATGTGTGTGATAAAGCCTTTGCTTGCTCCAGGGATTTGAGAGTTCATGCAAGGACACACATTACAGAGCCATACGACTGCCCCATGTGTGAGGAGAAATTCCATCGATATGAGAGTCTGCGGTTTCATGTGAACTCTCACAACAAGGATGACAAGTTCATCGCCTTGAAAAAGATGTCATGTATGCTGTGCGACACACAGCTACCAAGCATAGAGAGTCTAAAGACACACTTGTTTCGACATTCCGATGGACAGACAGGAGTAGACTTGAAGAATTGCAGATTCGCACAGGTTTTTTGCCCCGATGCTGACGAGACTAAGGTCTCGGAGACGATCAGAAGATGCTTTGAAGATCAACGACTTGGGGAGCTCTATGTGGGGATAAATAAGTTCGGACTCGAAGTGACATTGAGTGATTCGGACAGTGAAGATGATACGCGGTTACATAATGGCAATTTACAGATATTCACTTGCGAAGTGTGCGGTGAAGTATTCACTCAAATGCAGTCCATTCTTGAGCACCAGCACGTCGAACATGATGATCTAAGCACTAACGTGTCGCACACATGTGATAAGTGCGACGATAAGTTTATTTGTAAGGAACTCCTGCAACGTCATGCAGTAGTTGGCTGCTTGGACTTGGAAGAATTTGTGTGTTCGAAGTGCGGTTGTAAATTCGTTTATAAGCAAAATTTAGCAGCACACAACTGCTTAACTGTTGAGAAAACCCTAGAAGATGCTAAACAATGCGAAGTTTGTGGAAAGAAATTCAATTGGCTCAAAGACCTGCACAGACACAAACGTAGCCATGTGCCGGACGAGAGGAAATTCGAGTGTCTTGTGTGTGAACGGAAGTTCAACAGGAAAGACAACATGCGAGCGCACATGAAAGTGCACAACATCGACTATAAGATGCGATCGAAAAACAAGCTTAAGTGGGCGCAGCAAGACGAAAACCAATGCAAGCCTCATGGTGAGAAAATCATACAGTGCAAGATATGTTCATCGGTTCACAATTCAATTCGTGGCTTGACCACACACTTGATGACGCACAAAGATCGCAAGAGCTTAAAGCTAAATGAGTTGGAAGTGAGAAACATTTCGATGGTCCTGTACAAGATACCAATGGATCTGCGAACGTTGGCAAAGGCAAtatgcaacgatctaacgaatGGCAAGCATTCGCAATTCTATTCGATCACAAACGAAGTCGGCTACGAGTTGAGTCTGATCGATTCCGAAACGGAAACCGATCTGGACGCCGACGATGAGGAGGTTGAAAGTAAAGGCTACACCTGCATGTTATGTAGCAAGGCGTTCAATAGGAAATTCAAGATTTTCGAACACCAAAAGCAGGATCACTCGTGGGCCGAGCTACCACTCGAGTGCACATTTTGCTCGGCAAAATTTGTCTGCGAAAGTATGTATGACCTGCATCTGAGGAACGAATGTGAAAACACTGAAAAACAGTACAAATGTAAGCTATGTCCGCTGAAGTTCATGTGGAAGGAGAATCTTAAGAACCACGAGAAATACATGCACGATACGAATCCCGTACTTCCAAAGAAACATCACTGTGGCACGTGTAATAGAAGTTTCCTTTGGCACAAGGACTTATTGCGGCACGCAAAGAGCCATCAGGGCGAGGAAAAGTTCGAGTGCACATGGTGCTTTCGTGCATTTTTGCGAAGGGACAACCTTAAGGTTCACATGAGGGTTCACAAAAATGCAACTCACCTTCTGCTGCCAGATATCTACTATTTGGCTCGTCCGAATTGTAACAAAGTGGCGGAGTGCAAGCATTGTagtcagcagtacaccacgcTCAAAGATCTGCTTCAGCACATTCGAAGCGTACATCTGAGCAATCAAGTGCAAGAGACTGTTCCAGATCCAGCAAGTTATTCCATAACCAACGCACTAGGCTACGAGATGGACATTGAGGATTCGGAAACCGACCAAGAAGAGCCAAATGATAAATACTCTTGTGAGCTTTGTCAGGCTCGATTCAATCGTCGCTTCAAATTATTGCAACATCAGCAAGCGCTTCATTATTCCGATAATATCCCGCACAAATGTGTTCAGTGCAACTTCAAATGCGTGTCCGAAGATGTGCTCGCTTATCATATGAGATCGCAGTGCATGAATGATTTGAAACTATTTCATTGCAGCAAATGCACGATGCGATTCATGTGGCGAGATAACCTGGAAAATCATGAAAGTCTGATTCACAATAGCCCTCGCCCTCACACCTGCGAAGTTTGCAAACGTGATTTTGTAACGCAACACGATCTGAAGAACCACAGCGATTGCAAGCCGCCATTGGAAGTTAAGCTGTTTGAGTGTGATGTGTGTGATCGCAAGTACAATCGCAAGGACCGCTTGATGAAACATATAAAGGTGCACAATGAGAAGTATAAGGAGCAACGAGTGAAGGCTGCCGCTACGGATAAGAAGTTCTTGTGTGCTTTTTGCGGCAAAGAGGTGTCGAGCTCCTCGAATTTGGTCATTCATATGCGACGGCACACCGGGGAAAAGCCGTTCAAGTGTGAATTTTGCAACAAGGGTTTCCCACGATCTTCGGATCTGAATTGTCACAGACGTACGCATACCGGGGAGAAACCACACAAGTGTCCAGAGTGCGATAAGGCATTTTCACGTTCGTATAAGCTGCAAACGCATATGCGAATTCATTCCGGAGAGAAACCGTATAAGTGTACGTATTGCGAGAAGAGATTCACGCAGTCCAATGACCTAACGCTGCACGTGAGAAGACACACCGGTGAGCGACCGTACATATGTGAGACCTGTGGCGAGAGGTTCATACAGGGGACAGCGTTGAAAAACCATCAAAGGATGCGCGGACATTATCCTGTTTGA
- Protein Sequence
- MNTRSQSKTQKNKTGRFECDSCSKTFAWKKDLYRHERYHEPNIKKFPCPHCERRFIRKDKLSSHLQVHLAVQNKANTLKSFQYFAFNLFSEKKFTEIKCMICNADNFSNVRELRQHIVQHLSNLESVDDITNSLVVERFFPNMDVKDVLPILKEEIEKKEFGKFHSIVNGHSFEMGISDSDESDPDNVKRYICEVCAESFNRKHKLMMHQAYEHTFDECPYECKTCELKFTCKEIFQSHRKQYCENPDREFLCKYCPGRFIWPENSMKHKCRKKYITQKEKNKCNVCDKAFACSRDLRVHARTHITEPYDCPMCEEKFHRYESLRFHVNSHNKDDKFIALKKMSCMLCDTQLPSIESLKTHLFRHSDGQTGVDLKNCRFAQVFCPDADETKVSETIRRCFEDQRLGELYVGINKFGLEVTLSDSDSEDDTRLHNGNLQIFTCEVCGEVFTQMQSILEHQHVEHDDLSTNVSHTCDKCDDKFICKELLQRHAVVGCLDLEEFVCSKCGCKFVYKQNLAAHNCLTVEKTLEDAKQCEVCGKKFNWLKDLHRHKRSHVPDERKFECLVCERKFNRKDNMRAHMKVHNIDYKMRSKNKLKWAQQDENQCKPHGEKIIQCKICSSVHNSIRGLTTHLMTHKDRKSLKLNELEVRNISMVLYKIPMDLRTLAKAICNDLTNGKHSQFYSITNEVGYELSLIDSETETDLDADDEEVESKGYTCMLCSKAFNRKFKIFEHQKQDHSWAELPLECTFCSAKFVCESMYDLHLRNECENTEKQYKCKLCPLKFMWKENLKNHEKYMHDTNPVLPKKHHCGTCNRSFLWHKDLLRHAKSHQGEEKFECTWCFRAFLRRDNLKVHMRVHKNATHLLLPDIYYLARPNCNKVAECKHCSQQYTTLKDLLQHIRSVHLSNQVQETVPDPASYSITNALGYEMDIEDSETDQEEPNDKYSCELCQARFNRRFKLLQHQQALHYSDNIPHKCVQCNFKCVSEDVLAYHMRSQCMNDLKLFHCSKCTMRFMWRDNLENHESLIHNSPRPHTCEVCKRDFVTQHDLKNHSDCKPPLEVKLFECDVCDRKYNRKDRLMKHIKVHNEKYKEQRVKAAATDKKFLCAFCGKEVSSSSNLVIHMRRHTGEKPFKCEFCNKGFPRSSDLNCHRRTHTGEKPHKCPECDKAFSRSYKLQTHMRIHSGEKPYKCTYCEKRFTQSNDLTLHVRRHTGERPYICETCGERFIQGTALKNHQRMRGHYPV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00672974;
- 90% Identity
- -
- 80% Identity
- -