Basic Information

Insect: Eristalis pertinax
Gene Symbol: -
Assembly: GCA_907269125.1
Location: OU026149.1:43458444-43461080[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00011 0.0087 16.3 0.5 1 23 112 135 112 135 0.96

2 13 0.00045 0.036 14.4 1.2 3 23 142 163 141 163 0.96

3 13 0.00015 0.012 15.8 3.0 2 23 173 195 173 195 0.96

4 13 6.4e-06 0.00051 20.2 4.4 1 23 360 382 360 382 0.98

5 13 1.1e-05 0.00089 19.4 1.8 1 23 388 410 388 410 0.95

6 13 2.4e-06 0.00019 21.5 3.5 1 23 416 439 416 439 0.97

7 13 4.4e-07 3.6e-05 23.8 2.4 2 23 449 470 449 470 0.97

8 13 0.0039 0.32 11.4 3.8 2 23 476 497 475 497 0.97

9 13 9e-07 7.3e-05 22.8 2.2 1 23 503 525 503 525 0.96

10 13 6.8e-06 0.00055 20.1 1.6 1 23 531 553 531 553 0.98

11 13 5.3e-06 0.00043 20.4 0.6 3 23 561 581 559 581 0.96

12 13 7e-07 5.7e-05 23.2 1.3 1 23 587 609 587 609 0.99

13 13 0.00015 0.012 15.9 0.4 1 23 614 637 614 637 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00011	0.0087	16.3	0.5	1	23	112	135	112	135	0.96
2	13	0.00045	0.036	14.4	1.2	3	23	142	163	141	163	0.96
3	13	0.00015	0.012	15.8	3.0	2	23	173	195	173	195	0.96
4	13	6.4e-06	0.00051	20.2	4.4	1	23	360	382	360	382	0.98
5	13	1.1e-05	0.00089	19.4	1.8	1	23	388	410	388	410	0.95
6	13	2.4e-06	0.00019	21.5	3.5	1	23	416	439	416	439	0.97
7	13	4.4e-07	3.6e-05	23.8	2.4	2	23	449	470	449	470	0.97
8	13	0.0039	0.32	11.4	3.8	2	23	476	497	475	497	0.97
9	13	9e-07	7.3e-05	22.8	2.2	1	23	503	525	503	525	0.96
10	13	6.8e-06	0.00055	20.1	1.6	1	23	531	553	531	553	0.98
11	13	5.3e-06	0.00043	20.4	0.6	3	23	561	581	559	581	0.96
12	13	7e-07	5.7e-05	23.2	1.3	1	23	587	609	587	609	0.99
13	13	0.00015	0.012	15.9	0.4	1	23	614	637	614	637	0.95

Sequence Information

Coding Sequence: ATGGTTGATTTTGATATCGACAAAGTATGCCGAGTTTGCCTGCAGTCCAATCTTGAGGTATTGTTTCTGTTCGATGACCAAAATGCAGTCAAGGGTGTACGCCTGTCCGATATGATTTCCGAATGTACAATGTACACAGTTCGCCGATTTGACGGATTCCCAGATCTCATCTGTTATGATTGCATGGAGCGACTTCGCATTGCGTATGCATTCAAAAAGCAGTTTGAAACGTCACATCGAAAGTTAATCGGTTTCCTTGAGTTGAAATTTGTCTTGCATGAACAGCCGAGTGGGACAAACGATAAGTGCATTCAAACAGACGATACGTCATTGTATCCTTGTGAGAAGTGTGATGAGAAGTTCACTAACTATGAGCGTCTGAGGGAGCACAGATCAGTGGTACACAAGGGTACAGCGAATCTGTGTCGAGTATGCTCTAAGACGTTCAATCGCATTGCGGATCTTAAGAATCACATCGCTGTTTGTCACCCGGAGTCTGGGCATGTAACACCGAACGAGTGCACCGTATGCAGAAAGAAATTCATGCGAAAAGATCACGTTCAGCGGCATTTGCAAATGGTACATAAAATGCCCGCGGCCACTGACGACTCAAAGGGATTAAATGAGCGGAAGTTCAACCGAGATGGCAGTGACATTCTGGAAGAAACTGAAATTGACATGGTTCAGGGGCCAGATTCAGAGATCCTAGCAGCCTCCGATCCCGTCGATGGCCCTGAAGTCGGTCGAAATGAATTGGACTCATCGGAGCACACGGCGATTGACGATTGTTTGAATCGAGAACCAAAACTGGAAATCGAATCGAACTTTGATCCAGATGGTGATGGAGATGAATGCTTTAGTGATGGTTTTGACGAACCAAATTCGTTCAGTAGCGACGAAGATGAGAAGCCATTATCCAAACTAATAAGCGAGAATGTTTCGAGCCACAAAGATCTAACCGCTGTCAAAGTAGAACCCGATGAGGTCATAGATGATACCACACAGCATGATGCAAGTCCCGTTGCAAAAGACAATGCTGCAGCCGAACATCAAAGCAAGTCATCCTCAAAGCGTCGATTCAAATGCAGTCAGTGTGACAAAGAGTTCACACGGAGTAACCACGTTAAGCGTCATCTACTCTCGCACAGTCAGGAGAAACCGTTCAGCTGTCTCGTATGCAACAAACGATTTAGTCGAGCCGATCACCTGAAGATACACGCAAGCAATCATAACAGCGAAAAACCGTACAAGTGCTACAGCTGTGATCGCAGCTTTAGCCGCTCGGATCAACTGAATCGGCATCGGAAACAGAATCACGGCAGCGATAAGTTGGCACGCTCCGAGGTGTGTAAGTTCTGCAATAGGTCATTTAGCAGCAAATACTACCTTCAGAAGCATATGCGTGCGCACACGGAGAAAAATTGGAAATGCAAGTTCTGTGAGACTGATTTTCattccaaggaatcactgagaGAGCACACCAAATCGCACAGCACGGACAAACCGTTCCTCTGCTCGGAGTGTGGACAGTGCTTCATAAGGAAGGACTACCTGCTCATCCATATGCGAAGGCACAACGGTGAAAAGCCCTATAAGTGTAAATATTGCGAAAAGGGCTTCCCGCGCACTACAGACTTAAAAGTTCACGAGAGATATCATACGGGAGAGAAAACCCATCTGTGCACGATTTGTGGGAAGGGTTTCCAACGAGGCTATAATCTGGTGGTGCACATGCGTGTGCATACCGGCGAGAGACCGTACCAATGTCCACATTGTCCGAAGAACTTCTCGCAGGGCAACGACCTGAAGGTGCATGTGCGACGACACACCGGCGAGCGGTTCAAATGCCAAATTTGTGGCACGGAATTCATGCAGGGCTACAACTTAACACAACACAATCAAATTGTTCACGGAATTGAGGACAAATCTCGCAAAGGTCGTGTTGCTAAAGTCAAAGCCGAACAGAGGCAAGGGCACACGTCAGATGATGCAAATCGAACGATTGAAGAAGAGAATTCATAG
Protein Sequence: MVDFDIDKVCRVCLQSNLEVLFLFDDQNAVKGVRLSDMISECTMYTVRRFDGFPDLICYDCMERLRIAYAFKKQFETSHRKLIGFLELKFVLHEQPSGTNDKCIQTDDTSLYPCEKCDEKFTNYERLREHRSVVHKGTANLCRVCSKTFNRIADLKNHIAVCHPESGHVTPNECTVCRKKFMRKDHVQRHLQMVHKMPAATDDSKGLNERKFNRDGSDILEETEIDMVQGPDSEILAASDPVDGPEVGRNELDSSEHTAIDDCLNREPKLEIESNFDPDGDGDECFSDGFDEPNSFSSDEDEKPLSKLISENVSSHKDLTAVKVEPDEVIDDTTQHDASPVAKDNAAAEHQSKSSSKRRFKCSQCDKEFTRSNHVKRHLLSHSQEKPFSCLVCNKRFSRADHLKIHASNHNSEKPYKCYSCDRSFSRSDQLNRHRKQNHGSDKLARSEVCKFCNRSFSSKYYLQKHMRAHTEKNWKCKFCETDFHSKESLREHTKSHSTDKPFLCSECGQCFIRKDYLLIHMRRHNGEKPYKCKYCEKGFPRTTDLKVHERYHTGEKTHLCTICGKGFQRGYNLVVHMRVHTGERPYQCPHCPKNFSQGNDLKVHVRRHTGERFKCQICGTEFMQGYNLTQHNQIVHGIEDKSRKGRVAKVKAEQRQGHTSDDANRTIEEENS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -