Eper000868.1
Basic Information
- Insect
- Eristalis pertinax
- Gene Symbol
- su(Hw)
- Assembly
- GCA_907269125.1
- Location
- OU026145.1:25831204-25850771[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0019 0.15 12.4 1.7 1 21 109 129 109 130 0.95 2 22 0.0016 0.13 12.6 0.2 3 23 181 202 179 202 0.92 3 22 0.076 6.1 7.3 0.1 1 23 208 230 208 230 0.96 4 22 4.2e-06 0.00034 20.7 1.4 3 21 239 257 238 258 0.95 5 22 1e-05 0.00081 19.5 1.4 2 23 270 291 269 291 0.97 6 22 9.7e-08 7.8e-06 25.9 1.0 1 23 299 321 299 321 0.99 7 22 0.00052 0.042 14.2 0.6 1 23 327 349 327 349 0.98 8 22 0.00022 0.018 15.3 0.8 1 23 355 377 355 377 0.99 9 22 1.1e-06 9e-05 22.5 0.8 3 23 385 405 384 405 0.99 10 22 0.098 7.9 7.0 1.1 1 15 409 423 409 423 0.90 11 22 0.083 6.7 7.2 0.1 3 23 433 454 432 454 0.93 12 22 0.0019 0.15 12.4 1.7 1 21 783 803 783 804 0.95 13 22 0.0016 0.13 12.6 0.2 3 23 855 876 853 876 0.92 14 22 0.076 6.1 7.3 0.1 1 23 882 904 882 904 0.96 15 22 3.5e-06 0.00028 21.0 1.5 3 21 913 931 912 932 0.94 16 22 4.3e-05 0.0034 17.6 1.8 2 23 942 963 941 963 0.97 17 22 3.2e-07 2.6e-05 24.3 4.0 1 23 974 996 974 996 0.99 18 22 0.0017 0.14 12.5 0.6 1 23 1002 1024 1002 1024 0.98 19 22 0.00022 0.018 15.3 0.8 1 23 1030 1052 1030 1052 0.99 20 22 3.6e-06 0.00029 21.0 2.3 1 23 1058 1080 1058 1080 0.96 21 22 1.5e-06 0.00012 22.2 0.7 1 23 1084 1106 1084 1106 0.98 22 22 0.083 6.7 7.2 0.1 3 23 1126 1147 1125 1147 0.93
Sequence Information
- Coding Sequence
- ATGAAGCGAGCTGCAAAACCACTCACCAGAGGCGCCCTATTGCTCAACAAGGCAAAATCTTCACCTCCGgctaaaatttcaaaaacagaCGCCATTGAACTTGAGCTCGATGCATCGGAAAAAACCAATCATTACTTGCTGACGGAAATTAAGGGCAATGAAAATGAGAACGAGATCGCATTTGTCCTCACCACGAACGGCACTGAGGAGGGAGACAAACCGCCGGCCGAATGTCGAGAGGAGATTCAAATCGAGGAGACTTGTGACGAGCTGgaagacgaggacgacgacgatgacaaggTCAATACCAAGGAAATAGTCGAACACGTATGTGGCAAGTGCTATAAGTCCTTCCGGACAATCAAGGTGCTCAAACGACACATAAAATATTGCATCTTCAACAGTGAAATGGAGACACGAAAGGCAAAGATGGCACAAAACATCGGCAAAATCGAGAAAGAAGCTCTGATCATGGAGAAGAAGgattgttgcttctgctgtggcGATAGCTACGACACTTGTCATCTTGGCCACGTCAATTGCTCTGAGTGTCCAAAGTCGTTTAACTCGCAAATCATTTTGGAACGTCACATGTTCCTCATTCATTCGGAGAAGAAGGACTTTCCGTGCCCCATTTGCAATGGTTTCATCCGGACGGAGCAGCTGCTGAAACTGCATATTGATCAGCACAAAAATCGAGGGAAGCCGGTTGCATGCAAGCAATGTGGAAAGGACTTCACACGCCAGTATCATTTGAAGCGTCATCTCATGTACACGAGCTGTGGGGAGGGCCAAGCCGAAATCATGAAGTGCAAAGTGTGTTCGAAGGAATTCTATCGCTTGGACAACTTGCGGGTGCATCTTAAATCGCACTTGGGTCAAAAGAAGTCCGAATACACATGTCCAGTTTGCAAGAAAAGCTTCTACAGCTTGTCGACACTCAAtaTCCACATTCGAACGCATACTGGTGAGAGGCCGTACAATTGCGATCTTTGTGAGAATACCTTCCCGTCATTGGTGGCGCTGAAGAAGCACAGGAGATACCATACTGGCGAGAAACCGTACACCTGTTCTGTGTGTTCGCAGACCTTTGCTGTCAAAGAGATCCTGAACAGACACATGAAGAGACACACGGGCGAAAAGGCACACGGATGCGATGAATGCGGCAAACGTTTCATTCAGGCGACTCAGCTGAAAAATCACAGGCGCACACATCTAAGACCCTTCCCATGTACCGAGTGCGATGAAAAGttcaaaacagcaaaacaCTCCTTTTTCTTAGAGAATGAAAAAATATGCTCGGACTGCGGTGAGGAGTTTCCCGACACCGCGTCTGCTCGATACCACAAATTCACGCAACATATCGATGTTAACGAAACTGGAATGGTCGTCGAAGAAAGCAACCCCTCCATTCCGGaaaaggaagaagaggaagaggaagatgaagagaTCAAAAAAGAGGACAGTGACTGTGTCGTTATTGGCGAATTCATCATTGAATCGCTGCCAGCAGACGCTGCAATTGTGCTGCAGGAGTCGGTGGAAGATTTCGAGATCATACCAAATGACGATGAAGTGGAAGCGGAACCGGAAAAGTCCAaaggtacaaaaaaaaatgtatcctcCGGTTTGAAAGCAGAACTAAGAAAATCGTTGGCACAGCGGCTACACGGAGATCAGCCAAAGGAAGTCCCCGGCAAAACTATGAGCGACGACGACCGCGAAATCACTGAGAATGTGAACAAGCTGCTGGACATTTTAGTCGAACAGGATACGTTGGTGAAATTCAACTGGCGAAAAGATAATGTTGAAAATGTACTGTGCAAGGTAATAGAAAACTGTGGACACAGCCTGCATAAAACCAAATTTACCGAGGATTATGGTACTCGGATGAGGGAGTACGTGAAACTCTTGTTCACGGTGGTGATTCAAACCGATTCGATTAAGGAGCTCCTGAATAACTATTCCATTGATGAAGTTATCGAATTTGTTCTCTCCAATGACGATAACGAGCCGTTCAATATGAAGCGAGCTGCAAAACCACTCACCAGAGGCGCCCTATTGCTCAACAAGGCAAAATCTTCACCTCCGgctaaaatttcaaaaacagaCCCCATTGAACTTGAGCTCGATGCATCGGAAAAAACCAATCATTACTTGCTGACGGAAATTAAGGGCAATGAAAATGAGAACGAGATCGCATTTGTCCTCACCACGAACGGCACTGAGGAGGGAGACAAACCGCCGGCCGAATGTCGAGAGGAGATTCAAATCGAGGAGACTTGTGACGAGCTGGAGGAcgaggatgacgacgatgacaagGTCAATACCAAGGAAATAGTTGAACACGTGTGTGGCAAGTGCTATAAGTCCTTCCGGACAATCAAGGTGCTCAAACGACACATAAAATATTGCATCTTCAACAGTGAAATGGAGACACGAAAGGCAAAGATGGCACAAAACATCGGCAAAATCGAGAAAGAAGCTCTGATCATGGAGAAGAAGgattgttgcttctgctgtggcGATAGCTACGACACTTGTCATCTTGGCCACGTCAATTGTTCCGAGTGTCCAAAGTCGTTTAACTCGCAAATTATATTGGAACGTCACATGTTCCTCATTCATTCGGAGAAGAAGGACTTTCCGTGCCCCATTTGCAATGGTTTCATCCGGACGGAGCAGCTGCTGAAACTGCATATTGATCAGCACAAAAATCGAGGGAAGCCGGTTGCATGCAAGCAATGTGGAAAGGACTTCACACGCCAGTATCACTTGAAGCGACATCTCATGAGCTGCGGTGGTAGCCAAGCTGAGATGATGAAGTGCAAAGTGTGCTCGAAGGAATTCTATCGCTTGGACAACTTTCGCGTACATCTTAAATCCCACTTGGGTCAAAAGACGGTCCGGAGGTCTGAGTATACATGTCCATATTGCAAAAAATGCTTCTACAGCTTGTCGACACTGAAtaTTCACATTCGAACACATACTGGTGAGAGGCCGTATAATTGCGACCTTTGTGAGAATAACTTTCCGTCATTAGTGGCGTTGAAGAAGCACAGGAGATACCATACTGGCGAGAAACCGTACACCTGTTCGGTGTGTTCTCAAACCTTTGCTGTCAAAGAGATCCTAAACAGACATATGAAGAGACACACGGGCCAGAAGCCACACGCATGCGATGAATGCGACAAACGTTTCATTCAGGCCACTCAGTTGAAAAATCACAAGCGCACACATATACGACCCTTCCCGTGCACCGAGTGCGATGAGAAGttcaaaacagcaaaacaGCTTGAAAAGCACGCGAAAACCCACAACAAATCAGCAAGGCGGAGGCCGACAAAAACACGTTCCTCGAAGAATGAAAAAATATGCTCGGACTGCGGTGAGGAGTTTCCCGACACCGCGTCTGCTCGATACCACAAATTCACGCAACATATCGATGTTAACGAAACTGGAATGGTCGTCGAAGAAAGCAACCCCTCCATTCCGGaaaaggaagaagaggaagaggaagatgaagagaTCAAAAAAGAGGACAGTGACTGTGTCGTTATTGGCGAATTCATCATTGAATCGCTGCCAGCGGACGCTGCAATTGTGCTGCAGGAGTCGGTGGAAGATTTCGAGATCATACCAAATGACGATGAGGTGGAAGCGGAATCGGAAAAGTCCAaaggtacaaaaaaaaatgtatcctcCGGTTTGAAAGCAGAACTAAGAAAATCGTTGGCACAGCGGCTACAAGGAGATCAGCCAAAGGAAGTCCCCGGCAAAACTATGAGCGACGACGACCGCGAAATCACTGAGAATGTGAACAAGCTGCTGGACATTTTAGTCGACCAGGATACGTTGGTGAAATTCGGCTGGCGAGAGGATAATGTTGAAAATGTACTGTGCAAGGTAATAGAGAACTGCGGATACAATCTGTATAAAACCAAATTTACCGAGGATTATGGTATTCGGATGAGGGAGTACGTTAAACTCTTGTTCACGGTGGTTATTCAAAACGATTCGATCAAGGAGCTTCTGAATAACTATTCTATTGATGAAGTCATCGACTTTGTTCTCTCCAATGATGATAACGAGTAA
- Protein Sequence
- MKRAAKPLTRGALLLNKAKSSPPAKISKTDAIELELDASEKTNHYLLTEIKGNENENEIAFVLTTNGTEEGDKPPAECREEIQIEETCDELEDEDDDDDKVNTKEIVEHVCGKCYKSFRTIKVLKRHIKYCIFNSEMETRKAKMAQNIGKIEKEALIMEKKDCCFCCGDSYDTCHLGHVNCSECPKSFNSQIILERHMFLIHSEKKDFPCPICNGFIRTEQLLKLHIDQHKNRGKPVACKQCGKDFTRQYHLKRHLMYTSCGEGQAEIMKCKVCSKEFYRLDNLRVHLKSHLGQKKSEYTCPVCKKSFYSLSTLNIHIRTHTGERPYNCDLCENTFPSLVALKKHRRYHTGEKPYTCSVCSQTFAVKEILNRHMKRHTGEKAHGCDECGKRFIQATQLKNHRRTHLRPFPCTECDEKFKTAKHSFFLENEKICSDCGEEFPDTASARYHKFTQHIDVNETGMVVEESNPSIPEKEEEEEEDEEIKKEDSDCVVIGEFIIESLPADAAIVLQESVEDFEIIPNDDEVEAEPEKSKGTKKNVSSGLKAELRKSLAQRLHGDQPKEVPGKTMSDDDREITENVNKLLDILVEQDTLVKFNWRKDNVENVLCKVIENCGHSLHKTKFTEDYGTRMREYVKLLFTVVIQTDSIKELLNNYSIDEVIEFVLSNDDNEPFNMKRAAKPLTRGALLLNKAKSSPPAKISKTDPIELELDASEKTNHYLLTEIKGNENENEIAFVLTTNGTEEGDKPPAECREEIQIEETCDELEDEDDDDDKVNTKEIVEHVCGKCYKSFRTIKVLKRHIKYCIFNSEMETRKAKMAQNIGKIEKEALIMEKKDCCFCCGDSYDTCHLGHVNCSECPKSFNSQIILERHMFLIHSEKKDFPCPICNGFIRTEQLLKLHIDQHKNRGKPVACKQCGKDFTRQYHLKRHLMSCGGSQAEMMKCKVCSKEFYRLDNFRVHLKSHLGQKTVRRSEYTCPYCKKCFYSLSTLNIHIRTHTGERPYNCDLCENNFPSLVALKKHRRYHTGEKPYTCSVCSQTFAVKEILNRHMKRHTGQKPHACDECDKRFIQATQLKNHKRTHIRPFPCTECDEKFKTAKQLEKHAKTHNKSARRRPTKTRSSKNEKICSDCGEEFPDTASARYHKFTQHIDVNETGMVVEESNPSIPEKEEEEEEDEEIKKEDSDCVVIGEFIIESLPADAAIVLQESVEDFEIIPNDDEVEAESEKSKGTKKNVSSGLKAELRKSLAQRLQGDQPKEVPGKTMSDDDREITENVNKLLDILVDQDTLVKFGWREDNVENVLCKVIENCGYNLYKTKFTEDYGIRMREYVKLLFTVVIQNDSIKELLNNYSIDEVIDFVLSNDDNE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -