Basic Information

Gene Symbol
CA6
Assembly
GCA_907269125.1
Location
OU026145.1:39341589-39352701[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-07 9.9e-05 22.2 0.4 21 45 34 57 5 58 0.84

Sequence Information

Coding Sequence
ATGGAAGACTTTGAGGAAAAGCTTATTGCTGCAGTTAAAGCGCGTGACTACCTTTATAACGCAAAATCTCGCTCAAACAAAACCATTCACAAGCGGAATGGGGAGTGGGCAACAATCGCTAAGGAACTCAATAGATCAGTCGAGGAGTGCAAGCAGAGATGGAGAAGTCTCCGCGATCGGTTCGTGCGCGAAAGAAAGAAGCGGGAGCAACcttactggaggagtgcctcaCCGACTGACGAGTGGGATTTATATCCCTCACTCACATTCCTCAACGATTCTTTGCAGTCCAAAATgaaACTGGTCGTGGTTGGTTGCGAAAGTCCCAGTCCAGAGCCGAAGCGGGAAAATTCCCCCCCGGAAGACGCCACTATGACTGAGTTTTTCGATAACATGCAGCAGATTTTCAGTCCTCAAACGGACCCAGACGATGATGACCAGTTCGCCAGCTTATTGAGTTCTAAACTAAGACAACTGCCAAGATCAGCAAGATTGAAGTTGGAAGGCAGACTTCTGGATCTTGTAAACGAAGAGCTCCTGCAACATgaAGACAAGAATTGGTTCCATGAGCtgaattttgaagaaatcgaaatTGAAGATCCTGAGCGTTTCTTTACAATCACTCGGATGAAGCCGGAGGCGTTTAAGCTTTTACTGGCACTAGTAGAGCCCGCATTGGAAAAGACAGCACAAGGGAAACCAATGTCACCAAGTTGCAGATTGTGTCTTGTTTTATTTTATCTTTCGCAAGGCATTTCAAGGCAAATAATTGCCTGGATGTTCCGAATCGGATACACCACAGTGGGTGAGATTATTTACGACACATGTAACGTGTTGTGGGATGTTCTTATGCCCTTGTTCATGGCCCCACCTTGCAAGGACAACTGGCAACAGACTGCGGCTGATTTTCAGAGATTGTGGGGTCTGCCCAATTGTGTCTCAGCCATAGATGCAAAGCTCATCAATGTACGATGTCCGCCAAGAGGAAGTTCCGAACACTCCGAATATAAAGGCGATTATTATCCCATTGTTCTCTTTGCCGCTTGTGACGCGAACTATGTGTTCACCGTGGTAGATGTCGGCGCCTATGGAAACCGAAGCGATGGTGGTATTTTCGCGGAATCTACTTTCGGCAAGCAGTTGTCAGATGGATCACTCAATCTTCCTCCACCGACGGTTCTTCCGAATTCCAACATCGTCTGCAGTCACTACCTAGTTGGAGATTCGGCTTTTCCTCTGAAAACATTTCTGATGCGGCCGTATCCAGGGAAACTGCTCGAGGAAAAAAAGATTAACTACAATAAAAGTCTATCGCGTGCTAGCGGGGTAATTGAAAACGCATTTGGCGTTCTGGTAGCCAGATGGCGCATTCTGCAGACAACATTGAACATGTCGCCCACCAACGCAGACAAGGTAGTGAAAGCTTGCAttgttttgcacaattttgcaAAACTAAACGATGACGCATACTGCACTCCAGAATATATTGATCGTTACAATGATAACGATGTGCTACTTACCAAAGGTTCGGAATTCGATTACGGCAAACAAGCCCTGTGGTTGGATGAATTCTCTGATTGCAGCCTGACCAGACAATCACCAATTGAGATCATTTCGGATGAGACCGAAATCAATTACTCTCTGGCTGCGATTACATTCTCCAACTACGAAACCGTCTTCAAGTCGGCAGTAATTCAAAATAACGGACACACTGCCAACATTGCCCTGCCGAAGCCAACCGATTACTCTACAACCTGGCAGACCTATGACGCCACTGCACCACAAATCACCAATGGACCATATGGAAGTGCAGTATACGTTGCAGAAAGTATTCACTTCCATTGGGGTTCCTTGAGCACTCATGGATCCGAGCACGTAATCGACAGCAAACGCTTCTCGATTGAAATGCACGTCGTGCACAGGAACGGCAAGTACCAGAGCGTAGAAGATGCCCGCGTGAACGACGATGGTCTGGCAGTTTTGTCTGTGATGTTCGAAGTCGAGTCTAACAGAGCTGACTTTGCCGGACTTGAAGATGTGGTTGCCAGCCTTCCATCCATCACCGGATACGACGAGGAGACAGAAATTGAAGACTTCTCTTTGGCCGAACTTCTTCAGAGCTTGAACACAAACGAGTACTACACTTACCAAGGATCCCTCACCACACCACCATGCTCGCAGGCCGTCACTTGGGTTGTCTTCTCCAACCATATTGGCATTACTCAAACCCAGTTTGCCAAGTTCCATCTGCTTATTGATCCCCATGGTGCAACAATGGAGAACAACTACAGAGAATTGCAGTCCAAGGGCGAGAGGAAGGTGACTTTCCGCAAGAGCGCAGTCAAGAGCGTCTGGGACACATTCAACAGCGTTTAG
Protein Sequence
MEDFEEKLIAAVKARDYLYNAKSRSNKTIHKRNGEWATIAKELNRSVEECKQRWRSLRDRFVRERKKREQPYWRSASPTDEWDLYPSLTFLNDSLQSKMKLVVVGCESPSPEPKRENSPPEDATMTEFFDNMQQIFSPQTDPDDDDQFASLLSSKLRQLPRSARLKLEGRLLDLVNEELLQHEDKNWFHELNFEEIEIEDPERFFTITRMKPEAFKLLLALVEPALEKTAQGKPMSPSCRLCLVLFYLSQGISRQIIAWMFRIGYTTVGEIIYDTCNVLWDVLMPLFMAPPCKDNWQQTAADFQRLWGLPNCVSAIDAKLINVRCPPRGSSEHSEYKGDYYPIVLFAACDANYVFTVVDVGAYGNRSDGGIFAESTFGKQLSDGSLNLPPPTVLPNSNIVCSHYLVGDSAFPLKTFLMRPYPGKLLEEKKINYNKSLSRASGVIENAFGVLVARWRILQTTLNMSPTNADKVVKACIVLHNFAKLNDDAYCTPEYIDRYNDNDVLLTKGSEFDYGKQALWLDEFSDCSLTRQSPIEIISDETEINYSLAAITFSNYETVFKSAVIQNNGHTANIALPKPTDYSTTWQTYDATAPQITNGPYGSAVYVAESIHFHWGSLSTHGSEHVIDSKRFSIEMHVVHRNGKYQSVEDARVNDDGLAVLSVMFEVESNRADFAGLEDVVASLPSITGYDEETEIEDFSLAELLQSLNTNEYYTYQGSLTTPPCSQAVTWVVFSNHIGITQTQFAKFHLLIDPHGATMENNYRELQSKGERKVTFRKSAVKSVWDTFNSV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-