Basic Information

Gene Symbol
ct
Assembly
GCA_907269125.1
Location
OU026149.1:71615200-71647551[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-26 9.6e-23 79.8 0.0 3 71 675 744 673 750 0.94
2 3 4.8e-32 3.8e-28 97.1 0.0 3 77 1099 1174 1097 1176 0.96
3 3 6.4e-31 5.1e-27 93.5 0.0 3 77 1316 1391 1314 1393 0.96

Sequence Information

Coding Sequence
ATGGACACACCAACAATCGCATCCAGTACAGCGACGACGACAAGCGATCATCGTGACGGTAATGCAGTGACAACAACCAGTTGTATCGGCATCGGTATCAGTGGTGGATCAATAATTACAGATGCTAGTAAGCTTATCACAGCAATGACAGCCGAAATGAATCTCCATCAAGACACGAGCAGTGATGTAGCAGCACTATCGGCGAGCAGAGATCAAATGCCAAATCGGTCGCACAGCCCTCCGCCACTTAGCCTTACAGCGGAGGCCAGTGGTGCCAATGCGGAGGCAACGcgaaataataacaacaataataacaataatagtaCTAGTAACAATAATAAGAATACAAATAGTAATAGCGGTAATAGTTGTAATAATAATTTAGCTGATGAATTGGCTGCCAAAGAGAAAGAGATTAAAGCACTTATCGACGAGGTAAACCGACTGCAAGCCCTCCAAGAAACCCACATTGTACAAATACAAAGACTTGAAGATAATGTAGAAGCGAAGCGTCAACACATTCTGAGACTAGAGGCACGTCTCGAGCAGAAGCATCAGCTAATGAGCGATGTCCCACCTGCGCCAAAATTAAGTCCGGATCTGTATCGAGGGGATGAGGAGTCAACAGCCTCTACAACAGAACCTCCACCATTGGCGGCGGTCGTTCATCCAGATGAAGTTCACATCAAAAAGGAAAATCAAACACCTCTTGGTATCGACATCACAAGTCAGTCAGTTGcagttgctgccgctgctgttgcggcTGCAGCCAACGACCCCAAACAGTTCCAGGAACTTTTGCTCGAGAGAACAAAGGCATTGGCAGCTGCCGCACATGCCTCCTCTGAGGCCCTGAAATCCGAAGGAATTTCCAGTGATACGATATCAGCAGACACCGTTAAGGACACTGCTGGGAACGAGCCCCTTAGTTCTGAACCAAACGACTTAagtcaacaacatcagcagcaacagcaggagCTGCGATCTCTGTCAGAGTCAACTCCACCCTCATTACCCACAGACGAGCACACACCTTCGTCCAACTTTCAAAGCGTCGATCAATTCGGATCATTGCTGGGCGGTGAGCTGGTTAATTCATATTGGCGACGTGGTTTTGATTTGTCCGCTGAGCTCAAGttgccaccaccgccacatCACTTGCCCCTCGCACCGCCGGCTCCGTTGCCACCCACACAACAGGCATCACCAGCAACAGCCGCCGCCGTTTCGATAGCACACCCACCGCCATCGATAATACCAACGACAAATCCAACATCTAAAACGCCAACATCGATCTTTCAAAATTTCCCATCAATTCTTTCGTGCCGATCGCCTCCACCACTCTCAATGGCCGCAACTGGACCATCGACCGCCACCCTCTTGAGTCAGCTAGTTAATTCAACCTTCTCATCCAACCCAACCCCTTCTCTTCGAACAGATACCCACTCTTCGTTGACGACGTCGACTACCACAACCACCGGCGCTCACCTGCAGCAGTCCACGCAACAGCTCCATCAGCAACACCTCCATCATCAccagcaacatcaacaacacctgcaacaccaacaccaacaccagcatCAGCTTCAGcatcaacatcagcaacaacaacatgccACCGCTCTACAacatcatcagcaacaacaacaacaacagcaacaccagCATCAGGAGTACGAAAAAGCCAACAGCCACCACGACTCATCGTCCACGGCGAGTACACCTAATCTGCACGACCAGCGTTCCAACGATGAACATTTGAACGGAGGCGGAGCCATGAAATCCGCCAAGGAGGACAATAACAACTCGCTGGGCTCACTAGCACATCTACCGCCAGCATTCCTGCCCGGCCTGCCATTCCAATTCCAAGATCGTGGTCACTTCCGTTTCGCTGAAGATATCCAGCTGCCACCGGGCGCATCCATGGCCGGCCGACTGGGCGAATCCCTCATTCCCAAGGGTGACCCCATGGAGGCCAAACTCCAGGAAATGCTTCGCTACAACATGGACAAGTATGCCAATCAGAGTCTCGACACACTGCACATATCAAGACGCGTACGCGAACTGCTTTCCGTCCACAACATCGGACAGAGGCTTTTCGCCAAATACATCCTCGGCCTCAGCCAGGGCACCGTCTCTGAGCTTCTGTCCAAGCCAAAGCCGTGGGATAAACTGACTGAGAAGGGCCGTGACAGCTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGTTACTCAAGTCGCTGATACCGAAAAAAGATTCGGGCATACCCCAATATGGTCGCAACGAGGACTCAATGTCGGACGATCGTATAGCGCATATCTTAAATGAAGCTTCCAGCCTTATGAAGACCCCTCAGGGACCGGGTGCACAATTGCAACAGCAAATACAACATGAAGCTCAgcgtcagcagcagcaacagcaccagcagtcCTCCTCCGTCGAGGACTCGCACAGCAATGAGGACTCCAAGTCGCCCCATGCCTCGTGCACTTCTCCATTTTACAAGGAGTCACCggtacagcaacaacaacagcagcagcaacaacggcAGGACGTTCATCGGCGAAGCGTGAAGCCCGAAGACATGTCGCAAGACAAGGTGGCGCGGATATATCAGGAGGAGTTGGCGAAGCTCATGACCCGCACCCCACGTGACGCATTTCCAAGTTTTCTATTTCCACACTTTTTCAGTGGGGCTGGTGGCCTTCCGCCCACCAATACCGCAATACCGCCTGACGATAATATTCGCATCACCCTGGAGGCTTACCACCGCGAGATGGCGAAATTGCAACAGAACAGCAGTGGGAACATACCAAATTTCCCAACGTTCTCAAGCTTGATGGCGTTGCAGCAGCACGTCCTAAACGGAGCCCAGGATCTGTCCGTCCCgaaggaaaatgaaatgaaggtGAATGGCCAACGAAACTCCATGGAGAATTGCGAGTCGAATCAAACCAAAGAAGCCAACGAAGAAGCGGCATTGCGCCACTCAAGTGCATTCAGTCTAGTTCGCAATAAGCAGGAGTCCACGCCTGTGCCGAATTCCAATTGCAACGCAAACACAAACTCGGCTGCTCCCAGTCCCCTCAGCAATTCGATTCTGCAGCCGGCGATGACACCCACAGACGACTTTTCCACCGCAGCCAGCCCATTGCAGCGCATGGCGTCGATCACCAACTCGTTGATCACCCAGCCTCCGGTGACACCACATCACACCCAGCCACAGCGACCGACGAAAGCTGTCCTCCCACCCATCACTCAACAGCAGTTCGACATGTTCAACAACCTGAACACGGAAGATATCGTCCGGCGGGTGAAAGAAGCCTTGTCGCAGTACTCCATCAGCCAACGGCTGTTCGGCGAATCTGTGCTGGGCTTGTCGCAAGGCTCCGTGTCGGACTTGCTCGCTAGACCTAAGCCCTGGCACATGCTGACCCAGAAAGGCCGTGAGCCCTTCATTCGCATGAAGATGTTTCTGGAGGACGAGAACGCCGTGCACAAGCTTGTCGCCAGCCAGTACAAGATCGCTCCCGAGAAGCTCATGCGCACCGGAAGCTACAGCGGCAGCCCGCAAATACCGCAGGGGCTTGCGAACAAGATGAACAGCATTCCAATGCAGAAGATGATGAACGAGCTGAAGATGCAAGAACCACAGGCGCAGCACATCATGCAGCAAATGCAGGCTGCATCAGCAATGGCAGTCGCCGCTGCCGCCGGTCATATGCAGAACGCCCAGCATCAAGGTATGTTGCTCACCACACCAGGACTTCCGCCACAGCACGCCATAAGCCTGCAACAAGCCGCCGCCGCAGCTGCCAACGAAAAGAAGCCTATGATGATGCCAATCCACTCGCCACACCAAGCCAATGCCATGCGCACCAGCATGCACCAGCATATGTCGCCAACTGTTTACGAGATGGCGGCTCTAACGCAAGACCTCGACACACAGGTCATCACAACCAAGATCAAGGAAGCCCTGCTAGCGAACAACATTGGTCAGAAAATTTTCGGAGAAGCAGTTCTGGGCCTATCGCAGGGTTCCGTGTCTGAGCTGCTCTCGAAACCTAAGCCGTGGCATATGCTCAGCATAAAGGGCCGCGAACCATTCATCCGGATGCAGCTGTGGCTGTCGGACGCCAACAACGTCGAGCGATTGCAGGTACTTAAGAACGAGCGCCGAGAGGCCAGCAAGCGACGTCGCTCCACCGGGCCCAACCAGCAAGACAACAGCTCAGACACCAGTAGCAACGACACCGCCGACTTTTACACCAGCAGTCCCGGTCCGGGTTCAGTAGGGTCTGTGGGTGCGCCGCCAAACAAAAAGCAGAGAGTTCTCTTCTCAGAGGAGCAAAAGGAAGCACTCCGTCTGGCATTCGCTCTGGATCCGTATCCAAACGTGGGTACCATCGAATTCCTAGCCAACGAACTCGGTCTAGCAACGCGTACAATCACCAATTGGTTCCACAATCACCGAATGCGCCTCAAGCAACAGGTCCCACACGGCCAGCCGACGGAACCAGTGCCCAGTCGCGAGAATACCAACGCAACGCCCTTCGATCCCGTCCAATTCCGCATACTCCTTAATCAAAGACTGATGGAATTGCAAAAAGAGCGCATGGGCCTCAGTAACGCACCTATTCCCTACCCACCGTACTTCGCCGCCAATCCCAATCTCGCAGCACTCATCGGTCGTGGCCTCCTACCCGGCGGAGGTGAACCGGATCTGCAGGCCCTCAACAATGCCTTTAAGGAACAGATGAGTGGTCTAGATCTGTCGCTGAAGCGCGAACGCGATGACGACTTCGAAGACGATGGCGAGGGTGACAGTCATTTGTCGGACAACGAGTCCATCAACGGAAGCGATGAAAAGTCTGAGCTAAGTGAAACCCCCCGTTCGTCAATCTCCAGAGCTGGCATGCAGTCGCGTACATCGCGTCGCAAGCCTGCTGCCCCCCAATGGGTGAATCCCGAATGGCAGGGTGACGGTAAGACTGGCCTAATGCCACCGCTTCCCGGCGGCGTAAACGACAACGAAGTCATAATCAACGGTGTTTGCGTAATGCAACAGCAGGCCGCCGACTACAGTCGAAAGTCGTCGGGGAACGTCgcagacgatgacgatgacggtgcTTCCGATGGCAACGAAGACGAACATTCAGCCCATCATCGCACCCAGTCTTCCGATTGCGATGACCAACCCGCGGATATCGATCAGCGATTCATGGAACCCGAGGTCCGAatcaaacaagaagaagactgtgACAGCAATGATAGCCATCAGGATGACCACGACACCGACGTGAGAAAGCAACCCATCCACcgggacgacgaggacgacacaCCTGGCGTATGGAATTACTAg
Protein Sequence
MDTPTIASSTATTTSDHRDGNAVTTTSCIGIGISGGSIITDASKLITAMTAEMNLHQDTSSDVAALSASRDQMPNRSHSPPPLSLTAEASGANAEATRNNNNNNNNNSTSNNNKNTNSNSGNSCNNNLADELAAKEKEIKALIDEVNRLQALQETHIVQIQRLEDNVEAKRQHILRLEARLEQKHQLMSDVPPAPKLSPDLYRGDEESTASTTEPPPLAAVVHPDEVHIKKENQTPLGIDITSQSVAVAAAAVAAAANDPKQFQELLLERTKALAAAAHASSEALKSEGISSDTISADTVKDTAGNEPLSSEPNDLSQQHQQQQQELRSLSESTPPSLPTDEHTPSSNFQSVDQFGSLLGGELVNSYWRRGFDLSAELKLPPPPHHLPLAPPAPLPPTQQASPATAAAVSIAHPPPSIIPTTNPTSKTPTSIFQNFPSILSCRSPPPLSMAATGPSTATLLSQLVNSTFSSNPTPSLRTDTHSSLTTSTTTTTGAHLQQSTQQLHQQHLHHHQQHQQHLQHQHQHQHQLQHQHQQQQHATALQHHQQQQQQQQHQHQEYEKANSHHDSSSTASTPNLHDQRSNDEHLNGGGAMKSAKEDNNNSLGSLAHLPPAFLPGLPFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGIPQYGRNEDSMSDDRIAHILNEASSLMKTPQGPGAQLQQQIQHEAQRQQQQQHQQSSSVEDSHSNEDSKSPHASCTSPFYKESPVQQQQQQQQQRQDVHRRSVKPEDMSQDKVARIYQEELAKLMTRTPRDAFPSFLFPHFFSGAGGLPPTNTAIPPDDNIRITLEAYHREMAKLQQNSSGNIPNFPTFSSLMALQQHVLNGAQDLSVPKENEMKVNGQRNSMENCESNQTKEANEEAALRHSSAFSLVRNKQESTPVPNSNCNANTNSAAPSPLSNSILQPAMTPTDDFSTAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNELKMQEPQAQHIMQQMQAASAMAVAAAAGHMQNAQHQGMLLTTPGLPPQHAISLQQAAAAAANEKKPMMMPIHSPHQANAMRTSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPTEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLSNAPIPYPPYFAANPNLAALIGRGLLPGGGEPDLQALNNAFKEQMSGLDLSLKRERDDDFEDDGEGDSHLSDNESINGSDEKSELSETPRSSISRAGMQSRTSRRKPAAPQWVNPEWQGDGKTGLMPPLPGGVNDNEVIINGVCVMQQQAADYSRKSSGNVADDDDDGASDGNEDEHSAHHRTQSSDCDDQPADIDQRFMEPEVRIKQEEDCDSNDSHQDDHDTDVRKQPIHRDDEDDTPGVWNY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01395716;
90% Identity
iTF_00672120;
80% Identity
iTF_00672120;