Basic Information

Gene Symbol
Kdm5
Assembly
GCA_907269125.1
Location
OU026150.1:2168472-2185262[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-24 2.2e-21 75.9 0.0 2 89 204 287 203 287 0.95

Sequence Information

Coding Sequence
ATGTCATCAATTGAAATGAAGACAAGCAACAATATAAACGTAGTTGGGCCACAGACAACGGCGCGTTCATTATCGACACCGGCTGGCAGTACATACACAATCCAATGGCCGCcggtgtcatcatcatcatcatcagctgcagcagcggcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcggcagctgTAACGCCATCCACGGCGACCGGTGGCAGTGGCAACGTTGAAAGCGCCACCCGAATGGGCAGCCCATTGAAGGGTCACGAACAGCAGCGCAGCAGCAGCTGTGATGTGCCATTGCGAGCGAAGGTCTATCCGCATCATCCGCACAGTTCGTCGACATTttcgcaaaacaaaaacgaagagtACGAGTTCACGAAGCCGACCGAGTGTCCGGTGTTCAAGCCGAACGATGAGGAGTTCAAGAATCCCCTCACGTACATCAGTAAGATTCGGCCGATCGCCGAGAAGTATGGCATCGCGAAGATTCTCCCACCAAAGACATGGACACCACCGTTCACCGTGGACGTTGATAAGTTGAAGTTCACGCCTCGCGTGCAACGTCTGAACGAATTGGAGGCGAAGACCCGGGTGAAGCTGAATTTTCTGGATCAGATCGCAAAGTTTTGGGAGCTGCAGGGCTCCTCGCTTAAGATTCCGATGGTTGAGCGGAAGGCACTCGACTTGTACTCACTGCATCGCATCGTTCAGGAGGAGGGCGGCCTGGAGCAGACGACGAAGGAGCGCAAGTGGTCGAAGGTGGCCCATCGCATGCAGTATCCGCCGGGCAAGAGCATCGGCGCCATCTTGAAGGGTCACTACGAGCGCATTCTGCATCCGTTCGATATTTACACATCGGGCAAGGTGATCGATATCAAGCTCGAGTCGGAGACCGACGACAAGGACTACAAGCCGCACGGAATCGTTTCGCGTCAGCAGATAACGCCACCGAATGAGACAACGACACGCCGTTCGAAGCGCTTCGCCAACATGAACGCGAGCAAGGAGTCCGCATGCGGACTGGGCACCGTCTCGGCGAACATCAAGCCGGGAATGGAAGACGAGCAGAAGTTACTGAAAATGCTGGGTGCCAAGCCGGGCCGCGGCCGATTCGTGCGTCCAGCTACGCCGGCTCCGCTGATCACAAACGATCCGCTGGCCAAGTACATATGCCACATCTGCAATCGGGGCGACGTTGAGGAGGCGATGCTGCTGTGCGACGGGTGCGACGACAGCTATCACACGTTCTGTCTGCTGCCGCCGTTGCACGATATTCCGAAGGGCGACTGGCGCTGCCCGCGCTGTGTGGTCGAAGAGGTGAGCAAGCCAACCGAGGCGTTCGGCTTCGAACAGGCGCAGCGCGAGTACACGTTGCAGCAGTTCGGCGAAATGGCCGATCAATTCAAGGCGGACTACTTCCGGCGTCCGGTACATCTGGTCTCCACCGAGCTGGTGGAGCGCGAATTCTGGCGCATCGTCTCGTCGATTGACGAGGACGTGACTGTTGAGTACGGCGCCGACTTGCACACCATGGACCATGGGTCGGGCTTTCCGACGAAGAGCTCGCTGTACTTGCTGCCCGGCGACCAGGAGTACGCCGAATCAAGCTGGAACTTGAACAATCTGCCGCTCTTGGAGGAGTCGATCCTGGGCCACATAAACGCCGACATTAGCGGCATGAAAGTGCCCTGGATGTATGTGGGCATGTGCTTCGCGACATTCTGCTGGCACAACGAGGACCACTGGAGCTACTCGATCAATTATCTGCACTGGGGCGAGCCGAAGACCTGGTACGGCGTGCCCGGCAGCAAGGCTGAGCTGTTTGAGAAAACCATGAAGAGCGCCGCCCCCGAGTTGTTCGCCTCGCAGCCGGATCTCCTGCATCAGCTGGTCACGATTATGAATCCGAACATTCTGATGAACAACGGCGTGCCCGTGTACCGCACCGATCAGCATGCTGGCGAGTTCGTCATAACATTTCCGCGAGCCTATCATGCCGGCTTCAACCAGGGCTACAACTTCGCCGAGGCGGTCAACTTTGCGCCGGCAGACTGGCTGAAAATGGGCCGCGACTGCATCAATCACTACTCGATGCTGCGTCGCTTCTGTGTGTTCTCCCACGACGAGCTCGTCTGCAAGATGGCCCTGGAGCCGGACAAGCTGAACTTTGCCATCGCAACGGCGTGCTACATCGACATGGTCAAGATGGTGGACTCGGAGAAGAAGCTGCGCAAGAGTCTGCTCGAGTGGGGCGTCACCAAGGCGGAGCGCTACTCGTTCGAGCTGGTCCCAGACGACGAGAGGCAATGCGAGGTCTGCAAGACGACCTGTTTCCTGTCGGCGGTGTCGTGCCCTTGCACCAAGCAGATCGTATGCCTGCGTCATTACTCGGAGCTGTGCGAGTGCAAGCCGGACACGCATTCGTTGCAGTATCGCTACACTCTGGACGAGATGCCGTTGATGCTGAAGAAGCTGCAAACCAAGGCGCAGAGCTTCGAACTTTGGCTGACAAAATGCCGCGACGTCATCGATCCGCCGGACGCGTCGAAGAAGATCGCCCTCGAGGATCTGCAAGAGCTGGTGATGGAAGCGGAACGCAAGAAGTTCCCCAGCTCGCTGCTGATCGATCGGCTCAACTCGGCCGTGCTGGAGGCCGAGAAGTGCGTCACCGTTATCCATCAATTGGATATCAACAAGGTGCGCACTCGTACTCGCCATTCCAACGACACCACCAAGTACAAGCTGACCATGGACGAGCTGGAGCTGTTCGTCGAGGAGATCGACAACCTGTGCTGCGTCATCAAGGAGGGGCAGAGCGTGCGCGAGCTCCTCGCGTTTGGTAAGAGCTTTGTGACCGCCGCCGAGGTGGCGCTGGCCAAGAAAATCAACAAAGTGGACGAGAAGTCCCTCGAGAGGCTGATCGAGGAAGGCTCGTCGCTGTGCATCGAGCTGCACGATCTGAAGAACCTCCGCATACGGCTGGATCAGGTCAGCTGGTACAATCGATCGCGACGCTTCCGGAATGGAACCACAAAAGTGCAAATCGTCGATCTCAATCGATACATCAAGGAGGGCATGACCCTCATTCCGGATCCGCTCATTGAGAGGGAGATTTCGACGCTGCAGGGGATTGCGCTCTCCGCCGAGAGCTGGGAGAAGGCAGTGAAGTCCTGCTTCCAGCCGAGTGCACAAAACGACTTGGCCGAGATTGAACTGATAATAGAGACCTCGGAGAAGATCCAGGCCGAGTTGCCGTCGAAGGCGGCCCTCAAGGAGGCCCTGAGGAAGGCCAAAGATTGGCTGCACACCGTCGAGGTGTTGCAGAAGAACGAGCACTATCCGTACTACCACACGCTCGAGACGGTGGTCACTCGCGGGGTGAGCATTCCGCTGAAGCTGGAGGAGCTGGACCGCATGAAGAAGCATCTGGACGCGGCGCGCGAATGGAAGGAGAAGACGGCCAAAGCGTTCCTTCGCAAGCATTCGCAGTTCACGCTGCTGGACGTGCTGTCGCCACGCATAAGCGCCCTAATGGTGGGAGGCAGCGCACTGAAGCGGACCCCCCCGGAGGAGCAGTTCACCGAGAGTCTCTCGCCGGCGCAGATGGTGGACGCATTCAAGAAGGCCGAGGAGAAGGAAATTCGCGACATGCGCGAGCTGCGACGCATCAACACGGTGCGCAGCCCACTGGAGGACAAGTTCTGCTTCTGCAAGGGCAAGTTCACCGGCGACATGCACTTGTGCCAGCTGTGCCTGGACTGGTTCCACAAGGAGTGTGTACCGGCTGTGGCGACAAAGGAAACCACAGCACAGCAGCAGGTGTCGCCGAAGTACTTGTGCCCCTCGTGCATGCGATCGCGTCGTCCCCGCCTGGAGGCAATACTCTCGCTGCTCGTCTCACTGCAGCGACTCCCGATTCGTCTGCCCGAGGGTGAGGCCTTGCAGTGTCTCACTGAGCGCGCCATGAACTGGCAAGATCGGGCCCGTCAAGCGTTCGCAACTGAGGACGTTGCTGCCGCCCTGGCCGTGCTCTCGTCAGCCGCACAGAAGCGATCGCCGGAGCCAAAGAGTCCGGAAGCTGTCGAACCGAAGACCCCACCAAAGCAGGAGCCGGAGGAGAACACTGACGGCGAGCTGACCGAGTCAGATATTGGAAACGATGACAGCTGCGGCGAGGAGACTCCAATACGCATCCTCCCGCGGTTGGTGCCCGATGACGACGACCAGGACAGCGGCGAGTTGAAGGGATTCCCAGAGGAGCCAACCGAAGAAGATGATATCCCGCTACGTCGTCCAAAGATTGAGGAGGACACCGAGAGTGAGCTTGAACCGAATAAGTCACAAGGAGCTAAAGAGGTTGATCATGCGTACTCCGTTCCAAAGGTCGAGGCGCAGACTGAGGAGGTCACTGTGAAGGCTGTTCAGCCACTGGTCGAGCTGAAGAAGGCCACCAGAGAGGTGCTGGAGAGTCTGATGCTCGAGGGTGACCTCTTGGAGGTGTCCCTCGATGAGACCAATCACTTGTGGAAGATCCTGAACACGGCGCAGACCCTGAATGATGAGCTAACACCGATCCAAGAGATGTGCAAGTCTTTCCCGAAAGCAGTCAACGTGAAGGAACCATCCCCCCAGGCGGGCACACCACCGCCGAGGATCTTTAAGAAGCGTCCGCTGCCCGAGTGCACAACAAATCTCCCCGTGAAGCGTCTCTGGAAAGATGGCAATCGCAAGGTGAAGCGCGACAAGAAAATGTGCGAAGTCGAGCGGACAACTGACGTTGATCCGAttccgaatccgaatccgaatccgatCTCGATCTCGATCTCGATctcgaattcgaatttgaattcgaattccAATGCGAATTCCAATGTGAATTCCAATTCCAATCCGAATTCgaattccaattccaattcgaattcgaattcgaatctTAAGGTGTCCAATTCGAACGTGCGCAAACGCAAGCGTGCCGGCAAGTCGTCCATCCGGAACGATCTGTCCGTGATGCATTCAACGTCGGACGATGACGAGGAGTGTCGGGCACAGAATTGCCACAAGCCGTCGGGACGCGAAGTTGACTGGGTCCAGTGCGATGGCGGCTGCAACGAATGGTTTCATATGTTCTGCGTTGGTTTGGATCGCAAGCAAATCAAGCCCGACGACGATTACATATGCAAACGTTGCATGAAATCGAATGCAGAGAAtagcgccgccgccgccgccgccgccgccgccgccgccaccaccaccgaatCATCGTCGATCGCTGAGACAGTCTCACCAGTGTCGGCCGATGACGAGGCTATTGTACTTACCGATGCGACTGCTGAATTAGCCACCACATCACCGACATTATCAATTGCATCGATTGCATCGGCTGCATCGACTACATCGACTGCATCGACTGCATCGACTGCATCGACTGCAGCGACCACATCGGCAGCATCAACGTCGACATCAACATCGTCGGCATCAGTCGCATCTGCCGCAATGACCACGAGTACAAAGGCGATCGTAGATTATCGTGGAAAATTCTACCCACAATTGTCGTATTTGGTGAAGGTGAATACACCGCGCGCCGTAATGCAAGAGACTAAGAAGGCATTTAGAAAACTACCGAATCTTGAGCAGGCAATTACGGCCTTGTCAAATTTGAAGGGTGTCGGCACAACAATGGCATCGGCACTATTGGCAGCTGCCGCACCAGATAGTGCGCCATTTATGGCCGATGAATGCTTAATGGCCATACCGGAGATCGAGGGAATCGATTATACCACAAAGGAATACTTGAACTTTGTGCAGCATATACAGACGACGGTGCAACGATTGAATTCCGAAAGGGACAGTAATTCATCGTGGTCACCACATAGagttgaATTAGCATTGTGGGCACACTATGTGgcatccgatttggatccaaATCTACTTGATGATATGCCAGATGGCACAACACCGGCAAAGGTTTCAACAACAAATGGGACAACGTCAACAACTGCCACGGttacatcaacaacaacaaccgataATGAGGCCGAtgagaattcaatttcaaatgattCCGTATCACAGGAACGCATTGATAATACAACACAGACGACAACCAATACGGAGGGTACAACACCACCATCAAATACATTTGAACCATCTGATGAGAGTAATTTAGAACCGCCATCGGCACCGGCTAATGGTAAAAATAATGGCAATGGTGAGGACAGCCTGAgTGTCATGGACAGTTTGGATGAGAGCAGTTCCAGATCGGAGGATAGTCTTGAGAAGCCAATAACACCGATAATTGCTAACGACGAGACAAATGATAGCGACACGACATTAAGCAGTGGCAAGAGGTCCCTGCATTGTGAGAGCTCCGAGGATCAGAACAGTCAGCCAGAGACGAAAAAAGTCCGCAGTGATTAA
Protein Sequence
MSSIEMKTSNNINVVGPQTTARSLSTPAGSTYTIQWPPVSSSSSSAAAAAAAAAAAAAAAAAAAAAAVTPSTATGGSGNVESATRMGSPLKGHEQQRSSSCDVPLRAKVYPHHPHSSSTFSQNKNEEYEFTKPTECPVFKPNDEEFKNPLTYISKIRPIAEKYGIAKILPPKTWTPPFTVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYSLHRIVQEEGGLEQTTKERKWSKVAHRMQYPPGKSIGAILKGHYERILHPFDIYTSGKVIDIKLESETDDKDYKPHGIVSRQQITPPNETTTRRSKRFANMNASKESACGLGTVSANIKPGMEDEQKLLKMLGAKPGRGRFVRPATPAPLITNDPLAKYICHICNRGDVEEAMLLCDGCDDSYHTFCLLPPLHDIPKGDWRCPRCVVEEVSKPTEAFGFEQAQREYTLQQFGEMADQFKADYFRRPVHLVSTELVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAELFEKTMKSAAPELFASQPDLLHQLVTIMNPNILMNNGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRDCINHYSMLRRFCVFSHDELVCKMALEPDKLNFAIATACYIDMVKMVDSEKKLRKSLLEWGVTKAERYSFELVPDDERQCEVCKTTCFLSAVSCPCTKQIVCLRHYSELCECKPDTHSLQYRYTLDEMPLMLKKLQTKAQSFELWLTKCRDVIDPPDASKKIALEDLQELVMEAERKKFPSSLLIDRLNSAVLEAEKCVTVIHQLDINKVRTRTRHSNDTTKYKLTMDELELFVEEIDNLCCVIKEGQSVRELLAFGKSFVTAAEVALAKKINKVDEKSLERLIEEGSSLCIELHDLKNLRIRLDQVSWYNRSRRFRNGTTKVQIVDLNRYIKEGMTLIPDPLIEREISTLQGIALSAESWEKAVKSCFQPSAQNDLAEIELIIETSEKIQAELPSKAALKEALRKAKDWLHTVEVLQKNEHYPYYHTLETVVTRGVSIPLKLEELDRMKKHLDAAREWKEKTAKAFLRKHSQFTLLDVLSPRISALMVGGSALKRTPPEEQFTESLSPAQMVDAFKKAEEKEIRDMRELRRINTVRSPLEDKFCFCKGKFTGDMHLCQLCLDWFHKECVPAVATKETTAQQQVSPKYLCPSCMRSRRPRLEAILSLLVSLQRLPIRLPEGEALQCLTERAMNWQDRARQAFATEDVAAALAVLSSAAQKRSPEPKSPEAVEPKTPPKQEPEENTDGELTESDIGNDDSCGEETPIRILPRLVPDDDDQDSGELKGFPEEPTEEDDIPLRRPKIEEDTESELEPNKSQGAKEVDHAYSVPKVEAQTEEVTVKAVQPLVELKKATREVLESLMLEGDLLEVSLDETNHLWKILNTAQTLNDELTPIQEMCKSFPKAVNVKEPSPQAGTPPPRIFKKRPLPECTTNLPVKRLWKDGNRKVKRDKKMCEVERTTDVDPIPNPNPNPISISISISNSNLNSNSNANSNVNSNSNPNSNSNSNSNSNSNLKVSNSNVRKRKRAGKSSIRNDLSVMHSTSDDDEECRAQNCHKPSGREVDWVQCDGGCNEWFHMFCVGLDRKQIKPDDDYICKRCMKSNAENSAAAAAAAAAAATTTESSSIAETVSPVSADDEAIVLTDATAELATTSPTLSIASIASAASTTSTASTASTASTAATTSAASTSTSTSSASVASAAMTTSTKAIVDYRGKFYPQLSYLVKVNTPRAVMQETKKAFRKLPNLEQAITALSNLKGVGTTMASALLAAAAPDSAPFMADECLMAIPEIEGIDYTTKEYLNFVQHIQTTVQRLNSERDSNSSWSPHRVELALWAHYVASDLDPNLLDDMPDGTTPAKVSTTNGTTSTTATVTSTTTTDNEADENSISNDSVSQERIDNTTQTTTNTEGTTPPSNTFEPSDESNLEPPSAPANGKNNGNGEDSLSVMDSLDESSSRSEDSLEKPITPIIANDETNDSDTTLSSGKRSLHCESSEDQNSQPETKKVRSD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00670729;
90% Identity
-
80% Identity
-