Basic Information

Gene Symbol
Kdm5
Assembly
GCA_907269125.1
Location
OU026148.1:1196103-1201424[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-25 2e-22 79.2 0.1 2 88 192 274 191 275 0.94

Sequence Information

Coding Sequence
ATGTCGACGAAAGGtaacaaagcagcagcagcggcagcagatatttcttcatcgtcgtcatcgggAGCATCGGTGAGCAATTCGCAAATGTCCTCCGGTGGTAATGTGACAACAAATGGCACACCACAGAGGCGTTTGCGAACTAGAACATCGCAATCTGCTAGTGGAAGTGATAAGAAGGGCAGTGATCGAACATGTACATCAGCATCGAGTGATTCTAGCTCATCGATTCCGGGCAATATGTCCACTGAAGACACGAAGAAGAAGCCCATATTTGCACGAGGAAAACCATGCCATACCCAGCCCCATTCGTCATCGACATTTTCGCAGAATAAAAATGAAGAGTTCCATTTTGATACGCCAGTCGAGTGTCCTGTGTTCCGACCAACCACGGAGGAATTCAAAAACCCTCTCGCGTACATCAGCAAGATCCGTGTGCATGCCGAAAAATGTGGTATTGCAAAAATATTACCACCATCTGAATGGCGTCCACCATTTGCTGTCGATGTAGACAAACTTAAATTCACGCCGCGAGTGCAGAGATTAAATGAGCTTGAAGCTAAGACAAGggttaaattgaatttccttgATCAGATTGCAAAGTTTTGGGAGCTGCAGGGCTCTTCACTAAAGATTCCCATGGTCGAGCGAAAGGCTTTGGATCTGTATACGTTGCATAGGGTCGTTCAAGAGGAGGGTGGAATGGAGCAGACCACCAAGGAGAGGAAGTGGGCAAAGGTTGCCAACAGAATGTCTTATCCATCGAGCAAGAGTGTGGGGGCGACCCTGAAGGCTCACTATGAGCGAATATTACATCCCTTCAATGTATATACGTCCGGAAAGATTATCGATATGAAGCTGGAAGCAGAAGTGGTCAACGCAGACGACGGCCAGGACTACAAATCGCACGAGATAGTGTCTCGTCAGCAGATTACTCCACCAAATGAGACAACGGCTAGACGGTCAAAACGTTTTGCAAATTCGGGCAAAGGTGCGGTGTGTGGACTGGGTGCCACACCTTCCTCATCATCAGCTGTGCACATTGAGACGAAGGAAGATTTCAAGCGCAATCTAATCGCGACTTTCAACAAATTGGAAGCCAATGCGAGTGGTGGACAAAATCCAAACTTGGTGGATCCATTGATGAAGTATATTTGTCACATTTGCAATCGCGGTGATGTTGAGGAGTCAATGCTCCTCTGTGATGGATGCGATGATAGCTATCATACATTCTGCTTAATTCCGCCATTGGCTTCGATTCCGAAAGGTGAGTGGCTCTGTCCTAGATGTGTTGTCGAAGAAGTAAGTAAGCCCACCGAGGCATTTGGGTTTGAGCAAGCCGAACGGGAGTACACGCTTCAGCAATTCGGTGAGATGGCTGATCAGTTTAAGGCGGACTATTTCCGGAAGCCCGTGCACATGGTTCCACCGGACTTGGTGGAGAGGGAATTTTGGCGAATTGTCTCCTCAATTGATGAGGATGTGACCGTTGAATACGGTGCAGATTTGCACACCATGGACCACGGGTCTGGATTCCCAACAAAAAGTTCCCTTTATCTGCTTCCCAGTGACCAGGAGTATGCTGAGTCACCATGGAACTTAAATAATCTCCCCCTTCTGGAGGATTCTATTCTTGGTTACATCAATGCGGACATCAGTGGAATGAATGCTCCGTGGATGTATGTGGGCATGTGCTTTGCAGCATTTTGCTGGCACAACGAGGATCACTGGAGTTATTCGATCAATTATCTGCATTGGGGCGAACCGAAAACCTGGTATGGAGTGCCAGGTTCATGCGCAGAGGCCTTTGAAGAGACAATGAAGAAGGCAGCCCCAGAATTGTTTGCCTCACAGCCCGATTTACTGCATCAATTGGTCACAATCATGAACCCCAACATTTTGATGAACAATGGGGTGCCAGTTTATCGTACAGACCAGAATGCCGGAGAGTTTGTGATCACTTTCCCGCGGGCATATCATGCCGGCTTCAACCAGGGCTACAACTTTGCCGAAGCTGTTAACTTCGCACCGGCCGACTGGCTCAAGATGGGACGTGAGTGTGTGAACCACTACTCAATTCTGCGACGCTTCTGTGTCTTTTCGCACGACGAGCTAGTTTGCAAGATGGCCTTAGAGCCGAATAAACTCACGTTTGGCATTGCCACAGCCTGCTACATCGATATGGCCGAAATGGTGGACACTGAGAAGAAACTGCGCAAGAGCCTGCTGGAGTGGGGCGTCACACGGGCTGAACGCAAGTCATTCGAGTTGATACCCGATGACGAACGTCATTGCCAAGAGTGCAACACAACCTGCTTCTTGTCGGCGGTTTCATGCGAGTGCACCAATTCAATTGTCTGCCTCAGGCATTACACTGTACTGTGCGTATGCCCGCCTGAGAAGCACACCCTTCAATATCGTTACACACTCGATGAAATGCCACTGATGCTGCAGAAGTTGAAGGCAAAGGCTCAGAACTTTGAAAGATGGCTCTCGCGTGCCCGCGACATCCTAGACACAAAGACACGAACAACAGTTTCGCTCGCCGAGCTGCAGGAGCTGACAAAAGAAGCCGAGTTCAAGAAATTCCCAAGCTCAATGCTGATCGACAGACTGAATGCGGCCGTTCTGGAGGCGGAGAAGTGCGTGACGGTAATCCAGCAGTTGGGCATCAATAAGGTTCGTACTCGTCTGGATACGTCATCGGATGCAGCACAATACAAGCTGACGATGGAGGAACTGGAGTTATTCGCACAGGAGATAGACAACCTCTTTTGCATCATCGAAGAAGGTCACAGTGTGCGGGAGTTGCTTGCGGTCGGTAAGGATTTTGTGGAACGGGCTAGATTTCTGCTCGCCAGTCCTACAGAGATAGAGCTCGAGAACACGGTGGAATCGCTGATAAAAGAGGGTTGTTCGCTACGAATTGAAATGCAGGAAATGGTTGATCTGCAGAAACGCCTTGAGGCCATCAGGTGGGTCAAGCGTTCGCAGATGTATCGACATTCAAATGTGAAGATGACACACGTCGAACTGAAAGACCTGATTTGCACGGGAAAGAACTTCGTAAGCGACCCGACCATAGAGGAGGAACTCAGCAACCTGCTACAGATTCTAGTCGAGATGGAGAGATGGGAGAGCACCGCCGCAAAGTTTTTCCGCGGCAACACAAATCACGAATTGTCCGATATTGAGGTGTTCCTCAAGAGCGGAGATGAAATAAACTGTCAATTGCAATCCTACGGGGCGCTAAAGGACGCCATCAAAAAGGCAAAAGAGTGGCTAAAGTCTGTAGAGGCACTGCAGGCGAACGATAACTTTCCATACTGTCACACGCTGGAGGACATCGTGAAGCGTGGCGAAAACATTCCCATACGACTAGAAGAGCTGTTCCGTATGAAAGGATTTTTGAGGAGCGCCAAAGAGTGGAAGGATAACACTGCAAAGGCGTTCCTTAAGAACAACACATATTATGCACTACTTGAGGTACTTATGCCGCGGGAGGAACCAGTGGCTGTGGATTCGGATAGCAAGATGCCATTCGAATCGGATTTCCTGAAAGATATGAGTCCTGCACAGATTGTCGAGTCGTTCAAGTCTGCTGAAGAGAAGGAGATCAAGAACATGAGGGAGCTGCGACGGTCCAATATGGGAAAGAACCCGTTGAAGGATGACTATTGCTTGTGCAAGAGTAAGTTTCAAGGTGCAATGCTCAACTGTCAGCTGTGCAAAGACTGGTTCCATGAGAACTGTGTGAACTCCTCGTTCAAGGGGTCGACGAAAACCAGAGCATCTGCAGGCACTCCCACCCTGGGCAGAGGTTGTCCAACTCCGCCCGAGAATGGAATCAACGCGAGGCCAAAGTTCCTTTGCCCCTCGTGTGTCCGATCAAAGAGGCCCCGTTTGGAAACGATCCTCCCACTTCTCGTGTCGCTGCAGAAGTTGCCAATTCGCTTGCCAGAGGACGAGGCACTTAGATGCTTAGCCGAGCGCGCCATGAATTGGCAAGATCGCGCACAGAAGGCATTGTCAAATCCAGAAATAGCTTCAGCCATTGAAGCCATCATGAGGAACAAGACAAAGGCGGACAAGAGCACTCGACGGGCCACCACTCATCAAAGGAAAACAGCTACTCAACCTGAAAAACAATCGAGCATATCCGACGGAGAAGAGGGAgataatgacgatgaagaagacgatgacgatgacgatgagggACGTCTTCGAATTGATGAAGATGCATTCAGTGAGGCAGATTCATCGCATCCACCGGAAGATGAGAACAGTAAAAGTTACCCTATCAAACTGACTGATACTGAATACGAAGCACTAGAGGAACTAATGATGGAAGGGGACTTGCTTGAAGTCTCACTCGATGTATCTCATGAACTTTGGCGGATAATCAAAACATCAAATCCGAATGCTTCCGATCTAACCCACTATCAGCAGACCTTTAATCTCCCTTCAGAAGAATCCAATGACAGTCTAGTCAACCAACACACAAATAACAATTCGAGCAGTAGTAGCAGCAGCGGCAGTACATTAAAAAAGCGTCGTTCCTTAGAATCTGCCGCTCTCTGTCCAGTACCGCGCAAAAAGACTGCAACACCAAATAAGTTGCAGCAGGCGAACAACAAGAAAACGAGTGCACGCCGCTCGGAACCAACGAAACAATCAACGCCAATATCAACAGAGGAAAACACAGAGAATAATACACCGCCGCCGGCCAAAGGTGGAGGCAGCAATAAAAAGCGAAAGCGTGCGACCAGCAAAAAACTCTCACAACGTGCCCAATTGGCGCAACAGGAGGACGACGAAGAGGAATGCCGTGCCGAGAATTGTCACAAGCCGACCGGCCGCGAAGTCGACTGGGTACAATGTGATGGTGGCTGCAATGAATGGTTCCACATGTTCTGTGTTGGTCTAAATCGCAGTCAAATCAAAGCGGACGACGATTACATTTGCATAAGGTGCGCAAAGGCGAATCCATCTCAGACCCCAAAAAGCCGAACGCAGACCAGGTAG
Protein Sequence
MSTKGNKAAAAAADISSSSSSGASVSNSQMSSGGNVTTNGTPQRRLRTRTSQSASGSDKKGSDRTCTSASSDSSSSIPGNMSTEDTKKKPIFARGKPCHTQPHSSSTFSQNKNEEFHFDTPVECPVFRPTTEEFKNPLAYISKIRVHAEKCGIAKILPPSEWRPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRVVQEEGGMEQTTKERKWAKVANRMSYPSSKSVGATLKAHYERILHPFNVYTSGKIIDMKLEAEVVNADDGQDYKSHEIVSRQQITPPNETTARRSKRFANSGKGAVCGLGATPSSSSAVHIETKEDFKRNLIATFNKLEANASGGQNPNLVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLIPPLASIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGEMADQFKADYFRKPVHMVPPDLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPSDQEYAESPWNLNNLPLLEDSILGYINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEAFEETMKKAAPELFASQPDLLHQLVTIMNPNILMNNGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSILRRFCVFSHDELVCKMALEPNKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERKSFELIPDDERHCQECNTTCFLSAVSCECTNSIVCLRHYTVLCVCPPEKHTLQYRYTLDEMPLMLQKLKAKAQNFERWLSRARDILDTKTRTTVSLAELQELTKEAEFKKFPSSMLIDRLNAAVLEAEKCVTVIQQLGINKVRTRLDTSSDAAQYKLTMEELELFAQEIDNLFCIIEEGHSVRELLAVGKDFVERARFLLASPTEIELENTVESLIKEGCSLRIEMQEMVDLQKRLEAIRWVKRSQMYRHSNVKMTHVELKDLICTGKNFVSDPTIEEELSNLLQILVEMERWESTAAKFFRGNTNHELSDIEVFLKSGDEINCQLQSYGALKDAIKKAKEWLKSVEALQANDNFPYCHTLEDIVKRGENIPIRLEELFRMKGFLRSAKEWKDNTAKAFLKNNTYYALLEVLMPREEPVAVDSDSKMPFESDFLKDMSPAQIVESFKSAEEKEIKNMRELRRSNMGKNPLKDDYCLCKSKFQGAMLNCQLCKDWFHENCVNSSFKGSTKTRASAGTPTLGRGCPTPPENGINARPKFLCPSCVRSKRPRLETILPLLVSLQKLPIRLPEDEALRCLAERAMNWQDRAQKALSNPEIASAIEAIMRNKTKADKSTRRATTHQRKTATQPEKQSSISDGEEGDNDDEEDDDDDDEGRLRIDEDAFSEADSSHPPEDENSKSYPIKLTDTEYEALEELMMEGDLLEVSLDVSHELWRIIKTSNPNASDLTHYQQTFNLPSEESNDSLVNQHTNNNSSSSSSSGSTLKKRRSLESAALCPVPRKKTATPNKLQQANNKKTSARRSEPTKQSTPISTEENTENNTPPPAKGGGSNKKRKRATSKKLSQRAQLAQQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMFCVGLNRSQIKADDDYICIRCAKANPSQTPKSRTQTR*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01520752;
90% Identity
iTF_00672640;
80% Identity
-