Eper009761.1
Basic Information
- Insect
- Eristalis pertinax
- Gene Symbol
- retn
- Assembly
- GCA_907269125.1
- Location
- OU026148.1:26964430-26997181[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6 9.9e+03 -3.2 0.0 11 40 64 91 60 97 0.55 2 2 3e-26 5.2e-23 81.1 0.0 2 89 233 318 232 318 0.96
Sequence Information
- Coding Sequence
- ATGAGAGACTGTGAATCAGTCGATGACGAGAACACCAGTCGATTAAATGCCACGATGAACAACAGCATGGGCATGGATTATGGCGGAATCGGTGGAGGTGCAAGAAGCCCGGAGCAACACAATTCTGAAATTCCATTGAGTCACCATCACGCACAATTTGCAACGAATCATCCACTAGGAGCACTGGGAAATTTCATGAGCATGAACGGCTTACACACTCTTCCCAATTTGCACCAACACAACGATGTgttagaaaaattgaaaatgcaaGTTCGCGACATGAAAGTCGGTCTGATGGATCAGGAGTACCCTTCTCACGCAAACTTTGGCTCGAACGTCATTCCAACCCCCATCAATACAGCATTCACAATTCCATCAACTTCTCACGCTTCCTTTAACCACCCTTCACAAAATTTATCACAGGCTTCGCCGCAACCACAACAATCTTTGTTATCTACgcaccaacagcaacaacaacagcagcagcagtcgcaaTCGCAAACGAGTTCGCAATCGATGCCGAATGGATTCCCGTTCACGTCTCCCACAGCCCCAAGCACAAAAGACGTCAATCCTGCTTCAAATTCGTCAACATCCAGCGAAGCGTCTAACTCATCGCAACAGAACAATGGTTGGAGCTTCGAGGAACAGTACAAACAAGTTCGACAGCTCTATGAAATCAATGATGATCCGAAGCGTAAAGAGTTTCTTGATGATTTGTTTTCGTTCATGCAGAAAAGAGGTACGCCTATTAATCGGTTACCGATAATGGCAAAATCAGTTCTGGATTTGTATGAGCTATACAACTTGGTTATAGCGAGAGGTGGTCTCGTAGACGTTATCAATAAGAAACTATGGCAAGAGATCATCAAAGGGCTTCATTTACCGTCAAGCATAACTAGCGCTGCATTTACCTTGCGCACTCAATATATGAAGTATCTGTATCCATACGAATGTGAAAAGAAGAACTTAAGTTCACCGGTCGAACTTCAGGCTGCTATCGATGGTAATCGCCGAGAGGGACGTCGTTCCAGCTACGGTCAATTTGAGGCAATGCACAGTCAGATGCAGATGCCTCAAATGTCACGAAATAGTATGTCTGGTGCCATCCAGCAAATGTCTCCACTGGCACTGGTCACTCATGCCAACCCacaagcggcagcagcagctgcaGCCGCACATCACCGACTGATGGGTCCATCCTTTGGTCAAGTACCCAATTTGGTGCAACATGAAATAGAGCAACGCATGATGGAATATTTGAAGTTAATTCAAGCGAAAAAAGAACAAGCCCGCCCAAGATCCCAGAGTCCAGAGATAACAACCCGCGAAGCACTCAATGCATTGGAAATGTCGCGTGTAGCTTTGTGGTCGATGTATCACAACAACACAAGTCCACCAGCGTCAGTTAATACTTCACCACAGTGCCCGGAGCCACAACGtGAAGCGCTAAACCTTTCGGATACACCTCCGGATATTGTTATCAAGAGAGAGCGTGAACGCGAACCATCAGAATTGGGGGCGAATTCGGATAGGGAAGACTTTGGTCAACCACCTCCCGCCAAAAGAGGCTATTCAGCCAGTTTGTATCCACCCACAGTTCGCGATTTCACTGAACCCCATGACTCTGGCGTAGCAAATAAATTTGCAATTGAGAACAGCTCTCAAGACGATGACGTGAAACATCATGAACAACTGATTAAAGCACATAACCAAATGATCTGTTTACCACCACCGGCGACATtatctccacaaaaaaaagacgAGTCAAATCTATGTAACGAAAATGCCTCTACTGTTCACAATGGTCTGCTGGTACAGCAAGATAAAATTGAACCCCCGAAAATTGCGCCTGCGGAGCTTAGTATCAGCACGGGTATGCAGTTTAGACTATCGCAGAAATCAACCGGTGCAAATGGCGAACAACAACTTGTTGTTAATCTTGAACTGAACGGAATAAGCTATGAAGGTGTTCTTATCGCTAGACCAGCGTCACATCCCCCTGGTAGAACAACAGGTGATACAACTCCATCTTCTCCTGGTAGAATTGTAACAAATGGATCGAGCGATGTTCAAACAAACAATCCCTTGCTACGAGAGGGGCTCATTCATCATCCTTCTGCGATATAA
- Protein Sequence
- MRDCESVDDENTSRLNATMNNSMGMDYGGIGGGARSPEQHNSEIPLSHHHAQFATNHPLGALGNFMSMNGLHTLPNLHQHNDVLEKLKMQVRDMKVGLMDQEYPSHANFGSNVIPTPINTAFTIPSTSHASFNHPSQNLSQASPQPQQSLLSTHQQQQQQQQQSQSQTSSQSMPNGFPFTSPTAPSTKDVNPASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSSPVELQAAIDGNRREGRRSSYGQFEAMHSQMQMPQMSRNSMSGAIQQMSPLALVTHANPQAAAAAAAAHHRLMGPSFGQVPNLVQHEIEQRMMEYLKLIQAKKEQARPRSQSPEITTREALNALEMSRVALWSMYHNNTSPPASVNTSPQCPEPQREALNLSDTPPDIVIKREREREPSELGANSDREDFGQPPPAKRGYSASLYPPTVRDFTEPHDSGVANKFAIENSSQDDDVKHHEQLIKAHNQMICLPPPATLSPQKKDESNLCNENASTVHNGLLVQQDKIEPPKIAPAELSISTGMQFRLSQKSTGANGEQQLVVNLELNGISYEGVLIARPASHPPGRTTGDTTPSSPGRIVTNGSSDVQTNNPLLREGLIHHPSAI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00670725;
- 90% Identity
- iTF_00670725;
- 80% Identity
- -