Basic Information

Gene Symbol
GATA6
Assembly
GCA_944738805.1
Location
CALYJE010000061.1:3351030-3358613[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.4 5.7e+03 -2.9 0.2 16 27 379 390 378 399 0.72
2 3 2 4.9e+03 -2.7 0.3 1 7 402 408 402 409 0.84
3 3 3.2e-17 7.7e-14 51.1 6.1 1 34 438 470 438 472 0.97

Sequence Information

Coding Sequence
ATGGAAGGTCAGCAACAACAACATCAGCAACAACAACAGCAACAGAAGCCTATAGAGCTCATAACTGAGATTAAAACGGAACCTAGTAGCGAACAAGTACAGGCCCGTACCCCGACAATTGAGGAACAACATCAACAAGAACAACAGCAGCAGCAGCACTTGCAACAACAACAACAACAACAGCAGCAACAGCAACTGCAGCAGGAACAACAGCGGAAGGAGAACGCCTTGAATGTGAGACTTTTGCGTGGCGGACAAATTGATTCGCCGTCAGTGCCAATAAGAACCCAACAACGGCGCATACTAACAACAGCCGGAACCTTGAGAGAAGTCAACGATTCGGTACGAGAAACCGACGCCGACTCGGATTACAACAGTCTTCAGCATTCGCCGTCAGACTTCGTCCGGATGACACCGCGAAACGACGAGACCACCACCGTCTACACCTATGAGACCAACGCTGGGGCAACCACACTGGTCCCGTGTGAGAATCCGACAATCAAAATCGAGTCACTGGACAAAGAGCAACAGCAACAATTGCAGCAGCAACAAGATCAGCCGGTTAGCGGTGCAACGACCGTTTTTACTGAGGCAACCGTTGTGTCGGCCGCAGCGCTCCAAAATCATCACAATGCCAGCGCCCACCACAACACTTTGCGTGCGTACGAAGACGAGCGCTTCACTGCAACCATCGAGAATGGCGATCAGGCTCAGATCATTTGCTATGATCCGAACACGCTTAACGGCGCCACTGTTGTGGACGCACACTATGAGGGTAAGACCTTCACCAATTTGGGACCTGCTGCTGGCAGCCTGACTAGCTCCGGCACCGAATACTCCGTCTCGAGCAACTACAGCCAGAATGGTCCGTACAGCCTCACGCAGACCTACAACATGACCAATTCCAACCCGCTCCTCTACAAGACTGATCCAACGCTGAACTCTATGCGCACCACCAGCCAGTACCCGATAGTCTACGAGAGTCCCTCAGTGTCCGACACATACTGGTCAGCTCCTATGGAATTCCCTGGAATTAACGCCTACAATCAGGTGATAGCCGACGACTACGGCTCAACCAATACCGGCGCCTGGGTGACGCCCAGCGGAGGAACCACCAGCGCAACCAGCTTCGACCCGACCGGAAACGACCTGAAGTGTCAGTACTGTGGCAATCTAATGCTGAGAAAGGAGAACGAGTACATTTGCGTGGCCTGCTCAACGACCCGCATGGCTCATGTGCAGCGAATGCAGCCGCGCCAGGCCAAACCGAAGGCGTCCACCGCCAACAGTAACCGCAGGAGTGGAGTGAGCTGCGCAAATTGCCAGACCACCTCGACCACGTTGTGGCGGCGCAACAATGAGAGTCAACCGGTTTGCAATGCATGCGGACTGTACTTCAAGTTGCACAACATGAACCGGCCGCTGGCAATGAAAAAGGAAGGCATCCAGAAGAGGAAGCGCAAACCGAAGCTGGCGAATGGTGCTCCGATGAGGAACGCGCTGCCAAGTTTTCCAGTAACCCACGTCTATCCATCACAGGTTCAACCAATCGGTCTTCAAATGGTCCAAACCCATGAGCTGCATGACATGTCAGCAGCCAACAGCAACGGCACTAATCGCATCAGTATCAATCATCTCGATGCAATCAATGTGTCGCGCCATCACCTCACGTCGGACGTACCAACGTCAGAAAGTGAAAAATATTCAGCGCAATACAACTGCTGTGAGCCACCGTCACAAAGTCAATCGCCACACTTGCCCAATTCCAGCACACTTAACCGGCAGATCACACAGACCGTTCCACCAATAGATGGCGGCCGATCGGTCAATGGCGAGATTACAACCAGCGTCATCACCAGCACTGGCATCCCAGAGAGGTCCTCGAATAACTGA
Protein Sequence
MEGQQQQHQQQQQQQKPIELITEIKTEPSSEQVQARTPTIEEQHQQEQQQQQHLQQQQQQQQQQQLQQEQQRKENALNVRLLRGGQIDSPSVPIRTQQRRILTTAGTLREVNDSVRETDADSDYNSLQHSPSDFVRMTPRNDETTTVYTYETNAGATTLVPCENPTIKIESLDKEQQQQLQQQQDQPVSGATTVFTEATVVSAAALQNHHNASAHHNTLRAYEDERFTATIENGDQAQIICYDPNTLNGATVVDAHYEGKTFTNLGPAAGSLTSSGTEYSVSSNYSQNGPYSLTQTYNMTNSNPLLYKTDPTLNSMRTTSQYPIVYESPSVSDTYWSAPMEFPGINAYNQVIADDYGSTNTGAWVTPSGGTTSATSFDPTGNDLKCQYCGNLMLRKENEYICVACSTTRMAHVQRMQPRQAKPKASTANSNRRSGVSCANCQTTSTTLWRRNNESQPVCNACGLYFKLHNMNRPLAMKKEGIQKRKRKPKLANGAPMRNALPSFPVTHVYPSQVQPIGLQMVQTHELHDMSAANSNGTNRISINHLDAINVSRHHLTSDVPTSESEKYSAQYNCCEPPSQSQSPHLPNSSTLNRQITQTVPPIDGGRSVNGEITTSVITSTGIPERSSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00672539;
90% Identity
iTF_00671276;
80% Identity
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