Basic Information

Insect: Eristalinus sepulchralis
Gene Symbol: -
Assembly: GCA_944738805.1
Location: CALYJE010000088.1:3886839-3890529[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0096 1 10.0 0.1 1 23 96 118 96 118 0.95

2 8 0.00018 0.02 15.4 1.8 1 23 322 345 322 345 0.95

3 8 1.4e-05 0.0016 18.9 1.1 1 23 357 379 357 379 0.98

4 8 0.00016 0.018 15.6 0.2 1 20 462 481 462 482 0.97

5 8 0.06 6.5 7.5 1.4 2 23 517 538 516 538 0.96

6 8 5.3e-06 0.00058 20.3 2.1 2 23 590 612 589 612 0.97

7 8 0.0062 0.67 10.6 1.5 1 23 621 643 621 643 0.97

8 8 0.014 1.5 9.5 0.4 1 23 655 678 655 678 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0096	1	10.0	0.1	1	23	96	118	96	118	0.95
2	8	0.00018	0.02	15.4	1.8	1	23	322	345	322	345	0.95
3	8	1.4e-05	0.0016	18.9	1.1	1	23	357	379	357	379	0.98
4	8	0.00016	0.018	15.6	0.2	1	20	462	481	462	482	0.97
5	8	0.06	6.5	7.5	1.4	2	23	517	538	516	538	0.96
6	8	5.3e-06	0.00058	20.3	2.1	2	23	590	612	589	612	0.97
7	8	0.0062	0.67	10.6	1.5	1	23	621	643	621	643	0.97
8	8	0.014	1.5	9.5	0.4	1	23	655	678	655	678	0.92

Sequence Information

Coding Sequence: ATGTGCATCAAGTCTCATATAACGTTCAATGATATGCTACAGTCGCAGCAATGGCCACAGGAGGATTTTATCAAGAAGGAACCATGCGAATTCACTATCAGTTCAGTGGAATCTCAAGCCGATGTTGGGGGGGATAATTTTGTAATGACATCCAGTTTGCCGTCATCATCCACTGATGGTATGGTGTTTCAGGAGCCGAAGATTGAGCCAGCAAGTGCTGAGAATTCGCAGGAGGATTCAGCAAAGAATGAAAAAACGTCCAAGGTTGCGACAAAAACAAAGAAATTCACTTGCAATTTTTGCCGGGATGTATTCGATACATGGAACGATTTGGCTGTTCATGTAGCCGAGCATAAGGCCAAGAATTCTGCCGGAGATGACAGCAGCTGCGAAGTGCCGGAGAAGAAGCGGAAAATGTCACAAGCCAGCACGTCAAAGGAAGTCTTTCCTGTCGAATTGGGTTTCCGCATTGAGAATTTCGCATACGATGGTCGGAGTGAAAATTCCATTGATGGTCTCCTCTTGGAACCCATATGCAACGTTCAGGTGAAGGAGGAAGTGGAGTCAAACAACAGCGGTTCTGACTATGAGGAGGAAAATGAGGAGTCTGCGATGAACAAATACAACGCAAGCAATGAGAACGATGAAGATGGTGATGATCAGGAATACCAGCAAATACCTATCAAAACTGAGAAACAAGACGGCGAAGGACGGAACTTTGTGAACTCAAAGAGCCCCGTATGCGAGATGTGCGGCTTCAAACCGAAAATTCCAGCTCTGATGCACGCCCACGTTCGCAATCGTCATCCTGACAATTACATGGAATATGTTGAGAATTTGAAAGCATCTGGAGAGTGGGTGGTCAAGTGCAGGATCTGCGATGTTTATCTCTTCAGCAGCACGATCTATGGACAGCACTTGAAATATACTCATTCGCAAATCGTCAATGATTGCTGCGGATATTTCGAGTGCAACATGTGCGATCAAACATTCAACAGCAAAAATGACTTTTTCTTGCATAAGAACCAGGCTCACAACATGAGACGAATAAATAAAGCAAAACAAATCTTCACATGCCTTTTGTGCGACAAGCAATTTGGACGATACTCGAATCTCCAGCAACACGAAGAGACCCACGATGGCGATGGATCCGGCGGTGTGCCCAGTAGCAATGCCACCAATGGAAATACAGGTGGCAGCTCTACTAGCAGTGGAAACAGTTCCACTGCAGCCGCATCTTCGCCAGCTGTTGGCACGAGTGGCATGATGAAGAGGAAGCGTGTTGAAACCCCCGTCGAACCGATTGTTGTTCCAACTCCACCTATCATCAAGCCATCGCCGAAAAAGACCAATAGCAACATCACTACCTCCGCAGGTGGAAAATTCCAATGCCATGCTTGCGATAAGTCATTCGCCACCGAATTCGGTCTCAGAGTGCACATCGGTTGCGTACACAAGGGAATGGAAAAGCTTCCCCCGAAAAATGGAAAATCCAGCACCGCAGTCGCCTACACTCCAAAGCCTCCACCACCTCCGGTGACCGACAGTTACTGCGAGATCTGTGAAAAGCAGTTTGACTCCGTATCGGATTGTGGATCTCACATGCAGAAGCACTACGAAGTTGCATACACCTACAGAGAAACCGAAGATGTCCTCTCTCCAAATCCAACAAAATCTCCAAACACCGTCTCGAAACTGCTTAAGACTACTCCCAAAGACTATCTCACATTGCCTCAGCAACACACAAATGGAAAGACCATTAAACTTAAATGCAAGACATGCTCCAAGTTCTACCCGGACAAGTCATCTCTCATGAAGCATATGTTAACGTTCCACAAGAAGACTGATGGAAGGAAGCACTTCAACTGCAAAATCTGTTTCCGTTCCATCACTGGTTTGCAAAATTTCAACTCTCACATGACGTCGCATAAAGGCGACTTTCCCAAAGTCAAACCGAAGCACCACGCATGCCACTTGTGCTCGGGTGTGTTTGGGGAGCGAGAAGATCTTCAGAAGCATCTAGTTGTGGCGCATAGTTTTAATCCAATGATATTTTATAAAAAGTAA
Protein Sequence: MCIKSHITFNDMLQSQQWPQEDFIKKEPCEFTISSVESQADVGGDNFVMTSSLPSSSTDGMVFQEPKIEPASAENSQEDSAKNEKTSKVATKTKKFTCNFCRDVFDTWNDLAVHVAEHKAKNSAGDDSSCEVPEKKRKMSQASTSKEVFPVELGFRIENFAYDGRSENSIDGLLLEPICNVQVKEEVESNNSGSDYEEENEESAMNKYNASNENDEDGDDQEYQQIPIKTEKQDGEGRNFVNSKSPVCEMCGFKPKIPALMHAHVRNRHPDNYMEYVENLKASGEWVVKCRICDVYLFSSTIYGQHLKYTHSQIVNDCCGYFECNMCDQTFNSKNDFFLHKNQAHNMRRINKAKQIFTCLLCDKQFGRYSNLQQHEETHDGDGSGGVPSSNATNGNTGGSSTSSGNSSTAAASSPAVGTSGMMKRKRVETPVEPIVVPTPPIIKPSPKKTNSNITTSAGGKFQCHACDKSFATEFGLRVHIGCVHKGMEKLPPKNGKSSTAVAYTPKPPPPPVTDSYCEICEKQFDSVSDCGSHMQKHYEVAYTYRETEDVLSPNPTKSPNTVSKLLKTTPKDYLTLPQQHTNGKTIKLKCKTCSKFYPDKSSLMKHMLTFHKKTDGRKHFNCKICFRSITGLQNFNSHMTSHKGDFPKVKPKHHACHLCSGVFGEREDLQKHLVVAHSFNPMIFYKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00671199;
90% Identity: iTF_00671199;
80% Identity: -