Basic Information

Insect: Eristalinus sepulchralis
Gene Symbol: -
Assembly: GCA_944738805.1
Location: CALYJE010000020.1:2463995-2465820[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.6e-06 0.00061 20.2 1.2 1 23 232 255 232 255 0.96

2 8 7e-06 0.00077 19.9 1.3 1 23 264 286 264 286 0.98

3 8 0.00044 0.048 14.2 0.0 2 23 296 318 295 318 0.94

4 8 1.8e-06 0.0002 21.7 0.9 1 23 324 346 324 346 0.98

5 8 3.6e-06 0.00039 20.8 3.4 1 23 352 374 352 374 0.98

6 8 0.00026 0.028 14.9 0.2 1 23 379 401 379 401 0.97

7 8 5e-05 0.0054 17.2 1.3 1 23 407 429 407 429 0.97

8 8 0.0057 0.62 10.7 4.2 1 23 435 458 435 458 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.6e-06	0.00061	20.2	1.2	1	23	232	255	232	255	0.96
2	8	7e-06	0.00077	19.9	1.3	1	23	264	286	264	286	0.98
3	8	0.00044	0.048	14.2	0.0	2	23	296	318	295	318	0.94
4	8	1.8e-06	0.0002	21.7	0.9	1	23	324	346	324	346	0.98
5	8	3.6e-06	0.00039	20.8	3.4	1	23	352	374	352	374	0.98
6	8	0.00026	0.028	14.9	0.2	1	23	379	401	379	401	0.97
7	8	5e-05	0.0054	17.2	1.3	1	23	407	429	407	429	0.97
8	8	0.0057	0.62	10.7	4.2	1	23	435	458	435	458	0.97

Sequence Information

Coding Sequence: ATGGTCAAACTCTGGCAGCGATGGTGTCGCCTGTGCGCGAAGGAGGACTCGAACAACACAAACATTAGTGTGTTCCTTAAAGACGAGGAGATCTCATCACTCTCGGAGATCATAAACAAATGCTTCTCGGTGAACATTACCCACCAGGACGATTGGCCTCAGACGATATGCACAAAGTGCCATCAGCTTGTCACAACAATATCTACCTTCTCTCAACGGACGTCCAAGGTGCAGGCGATGTTCAGAGAGCTCTTCAACAACTCCAGCTTGGAGGAGATTGACGCAGGGCAATTGCGGGCTCAATTCGAACTCCACGAACTGGGGGATGTGGAACTGGACCTGAAGCTTTTTGCAAACAGTCCAGCTGTGCAGCTGTTTGAATCAAAGCCGAACATGACCACCGAGATGGCAGAGCAGATGATCGATCTGGAGGAACTGGATTACATTGACGAGGAAATGCTGAATCCGACAAACATCAAAACAGAGAGTGCCGACGAGGATATCATCGAAGAGGAACGTGATTCTGAATGGAAGGACAAGCCGCCATCGCCAGTGGAAGACGACACAGAGGAAAATGACTACAACGCTCCGAAAAGCGAGGGGGACTCTGACGAGTCGTATGAAGAGCCCAAAAAGAAGCGACGAGGGCGACCTAAGAAGTATGCGACGAAATTGAAGAGGGAAAAGGAACTGTACTCCTGCGATGAATGCAAGAAGGCATTCGCTCGTTACCCAAACTACCGGCATCACATGCAGGCAGGGCATGGAATCGCCCTCGATCCACCCCTTTACCCCTGCACAAAATGCAACAAAACCTTCGTCACATCCAGGCGCCTAAACGATCACGCCAACACCCACCTGCCTCTGGATCAGAAACTGATAATACCCTGCCCCTACTGCGAGAAAAAATTCACAAAGGCTGTCGTGGTGCAGTCCCACATCCGTGCTGTGCACATGGGCGAGAAGCCTTTCGTGTGTGAGGAGTGCGGTAAAACGTACAAGACTTTCGGGTCCCTGAAGGAGCACAAGCTTACCCATACAGAGGAGAGACCTTTCAAATGTACCTGGTGTGACAAGCGATTCAAGAACAAATCCCGCTTGAAAACACATGAGGACACTCACAATGACACAAACTACATCTGTACCATTTGTGGTCTCCAGCTAAACACCCGGCGGACCCTCAAGATGCACATGGTTGTGCACTCCGATCAGAAGCGTCACAAGTGCGATTACTGCGGCAACGAGTACAAACGTGCCAAAGCCTTAAAAAATCACCTCATATTGCATACAGGCCTCAAGCCGTACACGTGTAACTTCTGCGAGAAGAGCTTCGCTAACGGTTCCAACTGCCGGAGTCACAAGAAAAAGGCACATCCCATCGAGCTGGCCGCCATGGAGGCGGCTGGCACAAAGAGCATAACTACAAACATTCCGAAATTGGAACAACTAAGAGCTGTGACGTCCAACAAGGCGGTGATTGTTCAACCATTCGATCGTGACCAGGATTTCGGTGAAGGTGTGACTGTTGTGTCACTGGCCGACGATGTAGAGTCCCTAAAGGAGCAGGACTCCTCCGCGGAAGAACAGATGAATGCACAGCAAACAGATTTTGTCCATGCGGTGTTTGGTTCGATGCCGGCGAGCTAA
Protein Sequence: MVKLWQRWCRLCAKEDSNNTNISVFLKDEEISSLSEIINKCFSVNITHQDDWPQTICTKCHQLVTTISTFSQRTSKVQAMFRELFNNSSLEEIDAGQLRAQFELHELGDVELDLKLFANSPAVQLFESKPNMTTEMAEQMIDLEELDYIDEEMLNPTNIKTESADEDIIEEERDSEWKDKPPSPVEDDTEENDYNAPKSEGDSDESYEEPKKKRRGRPKKYATKLKREKELYSCDECKKAFARYPNYRHHMQAGHGIALDPPLYPCTKCNKTFVTSRRLNDHANTHLPLDQKLIIPCPYCEKKFTKAVVVQSHIRAVHMGEKPFVCEECGKTYKTFGSLKEHKLTHTEERPFKCTWCDKRFKNKSRLKTHEDTHNDTNYICTICGLQLNTRRTLKMHMVVHSDQKRHKCDYCGNEYKRAKALKNHLILHTGLKPYTCNFCEKSFANGSNCRSHKKKAHPIELAAMEAAGTKSITTNIPKLEQLRAVTSNKAVIVQPFDRDQDFGEGVTVVSLADDVESLKEQDSSAEEQMNAQQTDFVHAVFGSMPAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00672392;
90% Identity: iTF_00671127;
80% Identity: -