Basic Information

Gene Symbol
usp
Assembly
GCA_944738805.1
Location
CALYJE010000045.1:66848-68194[-]

Transcription Factor Domain

TF Family
ESR
Domain
zf-C4|ESR-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
This entry represents CLAVATA3/ESR (CLE)-related protein 14 from Arabidopsis thaliana (CLE14) and similar proteins predominantly found in plants. CLE14 is an extracellular signal peptide that regulates cell fate. It represses root apical meristem maintenance and functions as an elicitor of the root meristem differentiation through the CLV2/CRN complex signalling pathway. This protein inhibits irreversibly root growth by reducing cell division rates in the root apical meristem [1, 2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-37 1.4e-33 116.8 0.3 50 269 208 444 152 447 0.82

Sequence Information

Coding Sequence
ATGGATAGAGATAGAGAGTCGTCGTTTGGGCACACTATGGGTCCGATATCTCCGCCAGAAGTCAAACCAGATATATCCCTGTTGAATGGCAACAGCGCAGAAGGATTTTCTCCAGGTCCTGGCAGTCCGGGGCAATTAATTTCCATTAATAGTTTCCAGGGAGTAACCGCAATGAATGAATCTCCGACAAATCAAAACCGACTTCTTTCCCAACAACAACATTCGCAACACCAGCAACAGCCACAGTATCCCCCGAATCATCCACTAAGCGGATCAAAGCATTTGtgttccatatgcggggacagggcaagtggaaaacactacggcgtgtacagctgtgagggctgcaagggcttcttcaaaagaaccgtccggaaagacctcacctacgcatgccgcgaggacaagaactgcattattgacaagagacaacgaaaccgatgccaatactgccgctatcagaaatgtctgtcgtgtggcatgaagcgtgaagctgtacaggaggaacgtcagcgtggagccAAGCTCGCAAATGCACGCAACGAGGATCTAAATCCAACCAGTTCAGTGCGCGACCTCACGATCGAAAGAATAATCGAATCAGAGCAGAAAGCAGAAACCAGATGCGGGGACAACGCGATTCCTTACCTCAGAGTCGGGAACACGCCGATGGTGCAGCCGGAATACAAAGGAGCCGTGTCTCACTTATGCCAAATGGTAAACAAGCAGCTGTTTCAAATGGTTGAGTATGCCCGGCGCATGCCACATTTCTCACAATTGCATCGTGAGGACCAGATCCTTCTGCTGAAGGCCGGATGGAACGAACTGCTAATTGCAAACGTTGCCTGGCGCAGCATTGAGTTCTTGGACATCGAATGCACGAACGCCGACAGGACCATAGATCGTCGCACCACAATACGAACACCACAGCAGCTCTGTTTGGCTCCGGGATTCACTTATCATCGCAACAGCGCCACCCTGGCCGGTGTGCAGACGATTTTCGACAGAATCCTCTCAGAATTGAGTGTAAAGATGAAGCGATTGAACATTGACCGTGCCGAGTTGTCGTGCCTACGCGCGATTATCCTCTTCAATCCAGACATTCGAGGCCTCAAGAGCCGCAGCGACGTGGAGATGTGCCGAGAGAAGGTGTACGCCTGCCTGGACGAGCACTGCCGCAACGAACATCCAGGTGATGACAGCAGATTTGCACAGCTGCTGCTAAGACTGCCAGCATTGCGGTCGATAAGTCTCAAATGTCTCGATCATTTGTTCTTCTTCCGGGTGATCGGCGAGAAGCCCCTGGAAAATTTCATTGCGGAAATGCTCACCACACCGCTCTCCTAG
Protein Sequence
MDRDRESSFGHTMGPISPPEVKPDISLLNGNSAEGFSPGPGSPGQLISINSFQGVTAMNESPTNQNRLLSQQQHSQHQQQPQYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDKNCIIDKRQRNRCQYCRYQKCLSCGMKREAVQEERQRGAKLANARNEDLNPTSSVRDLTIERIIESEQKAETRCGDNAIPYLRVGNTPMVQPEYKGAVSHLCQMVNKQLFQMVEYARRMPHFSQLHREDQILLLKAGWNELLIANVAWRSIEFLDIECTNADRTIDRRTTIRTPQQLCLAPGFTYHRNSATLAGVQTIFDRILSELSVKMKRLNIDRAELSCLRAIILFNPDIRGLKSRSDVEMCREKVYACLDEHCRNEHPGDDSRFAQLLLRLPALRSISLKCLDHLFFFRVIGEKPLENFIAEMLTTPLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01044782;
90% Identity
iTF_00672237;
80% Identity
iTF_00671640;