Basic Information

Gene Symbol
Snapc4
Assembly
GCA_944738805.1
Location
CALYJE010000018.1:2775366-2777790[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 1.8 2.4e+03 -1.2 0.0 22 46 246 272 231 272 0.73
2 5 3.9e-11 5.3e-08 32.9 0.1 1 44 278 322 278 324 0.95
3 5 2.2e-14 3e-11 43.4 0.1 2 43 334 379 333 381 0.95
4 5 7.4e-11 1e-07 32.1 0.0 2 44 389 432 388 434 0.92
5 5 5e-14 6.8e-11 42.2 0.0 4 42 443 482 442 485 0.97

Sequence Information

Coding Sequence
ATGGAGAGTTTAAAGCGAATTTTAGATTCCTACGTCCAAGAGCAAGACAGTGAGGAGGAAACGTTTAATTATCGTGAGAAGAGCTACAACCGAGAGGATAACGATGCGGGTGGTACTGATCAGGACGAAGACGATGATGAAGATGAAGAAGACGAAGAGGAAGACGAAGATAATGGCTCACGCTTTCTAGGAGGATTTGAAGTAGACTATGTGTCAGAGGCTATGAAGACTCTGGAGGGTCATGCAGAAATTGGAACAGATAATGCGATTATTCTTAATCGAAAGATGCAGGAGATTCTGGAAAAACTTCGCGATAAAGTAATTTCGATGCTTAACAAATGTCGCCAGCAATACCAGGAAAATCAGCAAAGACTGTTGCATCCTGTGACCAAAATGACACTTCTTGGAGGAATTGGTAGCTGTGGCGCTCCATTTTTTAAAGATGCTTGTGGCAAGCCATGCCCTCCCAACCCAGACTATTTGTATCGGAGTGAAGTGGAAAAGGAATTGTTTATTGGTGACCTAGACCATTACCCACAGTTTGTTTGGACTGCAACCGACAAACTGGGTATACTGCAGGGAGTTAAGGAGCAGGCCATTGAATACATTGAACGGAAACAGGCCTTCCCTTCAACAAGCAAATGCCAGTCTTCTTCAAAGCTCAACAAAAATGTTAAACTTCATTCACTGAAGCTCACAGAGCTATTGGATGAGGTAGACGAAAACTTTTCGATTGACTGGAATCAGATCTCAGTGTATAACCTCAAGTCACGGCACACTGCGACCAGTTGTTACGCCATTTGGAATGTCTACCTCAAACCGGAGATTAATCGGGGCGAATGGTTGGAGGAAGAAAATTTAAAGTTGAACGCTCTTGCAAAAAAACACAAGTTTCAAGATTGGAGCGCCATAGCTGCTGAAATGAAGGGCAGATCCGACTATCAGTGTTTCGTTCAGTATCAGACCGTCGTATCGATTCAAATGCGTGAGGACAAAGGAGAACGATGGACGAAAGAAGAAGACGAGTTGTTGCTTAATTTAGTAGAGAAACATCGAATGGGAAACGTGATCCGTTGGAATCCGATTTGTTCTCAGCTGCCCAATCGAAGCAAGAGCCAATGTTTTGCTCGATACATGTACAGCATCAATCCCTCAATTTCAAGAGCCCCATTCACTCCAGAAGAGGACTGTATAATTTTAGCTGCAGTTGCAGAATACGGCGAAAACTTCAACGTATTCCCCAGATCACTCTTCCCAAACAGAACAGTAATCCAGATCCGCAACAGGTACTACAATTCCATAAAAATTCGCGAACAAACCCGTTTCTGGACACCGGCTGACGACAAAACATTGCTCCAGTTGGTGACCAAGTATGGAAGCCATGATTGGAAAAAGATCGCCGAGGAAATTCAAACGCACTCTCGTACTAGTTGTCGAACCCGTTTTTTTGTGATATCGAAATTCCTCAAAGATAACCCAAACGCAAGTTTGAATGATTTGCCGAGAAAAAAACGCGGCCCCGTTTCTACAGTGACGCGACAAAATTGGATGAACAAAATCGCAGAAATACAGGAAAATGGATGTCAGATGCGTAAACCAAAGGATCCCAAAAAGGAATTGTATAGATTTCGTCTGCGCAACAACGAGCTGAAGTGGTACAACTTCCTGAAGTACGCCTACGACTTTTCATACCTTAAGTCGTTTAGCAAAGTTCCCGATTCGGTGATCAGTTTAAATTTCGCCAAATCTGTCCTGGATTTCGACTTGCAACCTCCGGTTATCCTTCAGAAACCGTACTCCGCGGGGGCGGTTCGTGCCAGCATAGAAAAACTCATACGCATCCAAGATGAAAACAACCATGCAGTGGTTGCCAAACTGCCAGGATACAGCCTTCCTCCGAGCTATTGCACTCTCCTTGGTTTTCGTGGCTTGTGCATACTCACGTCATCCTGTGAAGAACAAACCATTCCGCCATCAAACGACTCAGAGGCTGGAGGTAGGGCAAAGGAAAAATTCCGAGAGCGCCTCGTAACTCTTATGTACAATACGACTCTCCTAAGCCGCTTGGACCCTGGCCAGGTATTGGAAAAGACGAACTTCGAGGTGGTCTTTGACCCAAACACTTCATTAGGCAGAGCGGCCAGCAGAAGTTTGGCCGAGATGCGACTGTCACAGACGAACGCCATCGCTGAGAACATAGTCAAAGCAACCCGCAAAGCCAAGAGAAAACCCAACGCAAGCGGTCACAGTCCAGTCAAGAAAAAAATTAAAACAGTCGGGGTAGAATAA
Protein Sequence
MESLKRILDSYVQEQDSEEETFNYREKSYNREDNDAGGTDQDEDDDEDEEDEEEDEDNGSRFLGGFEVDYVSEAMKTLEGHAEIGTDNAIILNRKMQEILEKLRDKVISMLNKCRQQYQENQQRLLHPVTKMTLLGGIGSCGAPFFKDACGKPCPPNPDYLYRSEVEKELFIGDLDHYPQFVWTATDKLGILQGVKEQAIEYIERKQAFPSTSKCQSSSKLNKNVKLHSLKLTELLDEVDENFSIDWNQISVYNLKSRHTATSCYAIWNVYLKPEINRGEWLEEENLKLNALAKKHKFQDWSAIAAEMKGRSDYQCFVQYQTVVSIQMREDKGERWTKEEDELLLNLVEKHRMGNVIRWNPICSQLPNRSKSQCFARYMYSINPSISRAPFTPEEDCIILAAVAEYGENFNVFPRSLFPNRTVIQIRNRYYNSIKIREQTRFWTPADDKTLLQLVTKYGSHDWKKIAEEIQTHSRTSCRTRFFVISKFLKDNPNASLNDLPRKKRGPVSTVTRQNWMNKIAEIQENGCQMRKPKDPKKELYRFRLRNNELKWYNFLKYAYDFSYLKSFSKVPDSVISLNFAKSVLDFDLQPPVILQKPYSAGAVRASIEKLIRIQDENNHAVVAKLPGYSLPPSYCTLLGFRGLCILTSSCEEQTIPPSNDSEAGGRAKEKFRERLVTLMYNTTLLSRLDPGQVLEKTNFEVVFDPNTSLGRAASRSLAEMRLSQTNAIAENIVKATRKAKRKPNASGHSPVKKKIKTVGVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-