Esep010891.1
Basic Information
- Insect
- Eristalinus sepulchralis
- Gene Symbol
- -
- Assembly
- GCA_944738805.1
- Location
- CALYJE010000086.1:2303164-2305768[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1 1.8e+03 -1.2 0.0 27 43 94 110 94 111 0.85 2 4 1.7e-14 3e-11 42.9 0.1 4 42 145 184 142 187 0.91 3 4 0.079 1.4e+02 2.4 0.1 18 37 206 225 198 231 0.80 4 4 9.5e-09 1.7e-05 24.5 0.0 7 39 258 290 255 294 0.86
Sequence Information
- Coding Sequence
- ATGCTCGCAACAATATGGGGGTCGATAAAGACACGGATGGAAATACCGAATGCTCTGTTGCCGGAGTTGAATGAACTAATAGCTGAGGACGAAGTAGAATGCGTCGACGCCACCGAAATAGACACAAAACCCGCCGAAGAAACCCTGATACCGGTGGCGGCGCTTGTTGACTCAACTCCCACGTCCTGCGAGCAATTCATCATTTTTCAACTGAAGACTGACTCAGAACCAATGTTCAATTATGTCATAAAGCAGGTCAAGAAACCCCCGCTTGATGATGAAATCCCAACGCAGACGATATCCTCTGCCAACAGCGAGTCCATTCAGCTTGAAGAAACCGCTGCCTCCTGCGTACAGGAAACAGATTCAAAGAAAAATCGAGACGAAACCAAAGAGAACTCCCGCAAAACACAGCGAGCCTTGAACCGAAAACGACTTGACGAAGCCCTGGAAGCAGTCGTCAGCAGACAGATGACTATTAGTAAAGCGGCCAGCGTCTACCAGGTGACGAAGAGTACACTCTGGAAGGAGGTGAACAAGCGCACAGACCACCGCAAAAAAGTCGTAGATGAGGAACTCAATCGAAAGATCGCGAAGCGAATTTGCTCCGGCGAATCTCTTTCGAAGATTTCGCGAACGCTAAAAGTAGCCAAATCCACACTGCACCAGCACAAAGTTCGATTGGCTCAGAGGGGTCAACTGCCATCCAATGTCACACTGAAGCCGCCTGTGGACCCCAACGAGAGACTTGCGGTGAAAAAACGCGTCATCGAAGCATTCCGTGGGTGTCAGGTGAATGGGATGTCAATACGCCTAGCGGCGAAATTCTTCTCAATATCGCCCACCACTCTGTGGAGACACATTCAACAGTACAAGAGCCTACACGGGGGCGCATTACATGGTCGCCGTGATCAACAGAGTGTTGAAGTTGCGCCAGAAGAGGAGGAAAAGACTGAACCTGAACTGGACTCAGAATCGAGTGCCGAGGATGATACGAATTCACAGGCATCAAAAGCCAGCAGCACCTCTGCTGAAGATGAGGGCGCAGCCAGCGAAATTGATGATTTCCTGATAAGCTTTGACTTTGAAACGTTTGAAGAGTACATTAAGCAGGAGCTAGAGAGGTAG
- Protein Sequence
- MLATIWGSIKTRMEIPNALLPELNELIAEDEVECVDATEIDTKPAEETLIPVAALVDSTPTSCEQFIIFQLKTDSEPMFNYVIKQVKKPPLDDEIPTQTISSANSESIQLEETAASCVQETDSKKNRDETKENSRKTQRALNRKRLDEALEAVVSRQMTISKAASVYQVTKSTLWKEVNKRTDHRKKVVDEELNRKIAKRICSGESLSKISRTLKVAKSTLHQHKVRLAQRGQLPSNVTLKPPVDPNERLAVKKRVIEAFRGCQVNGMSIRLAAKFFSISPTTLWRHIQQYKSLHGGALHGRRDQQSVEVAPEEEEKTEPELDSESSAEDDTNSQASKASSTSAEDEGAASEIDDFLISFDFETFEEYIKQELER
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -