Esep014781.1
Basic Information
- Insect
- Eristalinus sepulchralis
- Gene Symbol
- br
- Assembly
- GCA_944738805.1
- Location
- CALYJE010000140.1:609299-610807[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.7e-15 1.3e-11 44.0 0.0 3 43 288 328 286 330 0.91 2 3 0.0069 12 5.8 0.0 27 37 359 369 350 374 0.87 3 3 1.4e-17 2.4e-14 52.9 0.0 3 43 397 437 395 438 0.93
Sequence Information
- Coding Sequence
- ATGAACCACCTAAAGTGGATGGGCCATACGGCGACCATCCTTGATATTCAAAAAGCCCTTAAAAATGATTCAGCCACCTGTGACATTACTATTGCCTGTCGGGGGAAATCTGTTGTGGCCCATCGTTTCGTACTATCCTCATGCAGTGACCTGCTTCGTGATCTACTGTGTGATATACCCGTTGGACAAGAAGCCACCATAATGGTGCCCGATGTCAAAGGAAGTTTATTGGATAGTGTACTCAGTTTCATATATATGGGAGAGACAAGTTTGTCCTCAACAAATCTCTCAGATTTCTTAGAAGCGATAAGCATACTAGGCATTAAAAGCGCTATTAGCTTCGAGTGCGCAAATAGCACTTCGTTAAATAACATCAAAAGTGTTGCAGAGATGACGGAAATGGAAGAGGAACTTATGGAAGCCGAACCGGAGCAAGAAATTGTTGAGAAAGTTGAAGAGGAGGACCAGACAATTACCGAAAATAATGGTGTACGTCAGCTTGAATTTCTGGAGGTGTACAATGAGCAGGAAAAGATTAGCTACACCATAGAAAATATAACACCAACAAATCCAAATGAATACATATTCACCGAGAGTTCTGGGACGTTCACACTGACTCCGAATACAAAAATTGATACTCATGAAGTTGAAACACTTGTGGACAAGCCCGATGATGAGACCGCGATGATGGAGCACTACGTCAATGATCCAATTGGCGACAGCAGTCAAGGATCCAGTACTGATATGAAAGATGTAAAAACGATGAAAAAACTTAAAGATGAATTTAGTGAATTTCAAGCTCTCAGTCCAGTCGACAGCAAAGGCTATCAGACTTTTAACGAAACACAGTCGGCGCGCGTAGAAGCATTAGAAAACGCCGTCCTTGCAGTTGTCGACGAAGGTATGAGCCTCCAAAAAGCCGCCATCAAATATAACATATCAAAAACAGTTCTATGGCGTCGAGTGAAAAAGCATCCGCTCTATATGAAAACAACCCGAGAGAATCCAGTTATCACAGCAGCATGCGAACGTTTAAAGAATGGGGACTCATTGAAAAGCATAAGTCAAGCGCTTGATATTCCAATGTCGACACTCCATAGACATAAAGTTAGGCTAGCGCAGGAAGGTCGTCTCCCAGAGTATGTGACATTCAAGAAACGTGGTCCAATGTCAAAGGAGATGCTAAAGGAAAAACTAACCAAGGCTGTTCAGGCATGTCTGGGCGATGGAATGTCTCAAAATCATGCGGCAAATGTATTTGACGTTCCAAAGAGCACACTGTGGCGACATTTACAAAAGAAAATGTTTCGATCAGGGAATTCGAACAGCATAACAATCAAGGAAGAAGTAGTCTTACCATAG
- Protein Sequence
- MNHLKWMGHTATILDIQKALKNDSATCDITIACRGKSVVAHRFVLSSCSDLLRDLLCDIPVGQEATIMVPDVKGSLLDSVLSFIYMGETSLSSTNLSDFLEAISILGIKSAISFECANSTSLNNIKSVAEMTEMEEELMEAEPEQEIVEKVEEEDQTITENNGVRQLEFLEVYNEQEKISYTIENITPTNPNEYIFTESSGTFTLTPNTKIDTHEVETLVDKPDDETAMMEHYVNDPIGDSSQGSSTDMKDVKTMKKLKDEFSEFQALSPVDSKGYQTFNETQSARVEALENAVLAVVDEGMSLQKAAIKYNISKTVLWRRVKKHPLYMKTTRENPVITAACERLKNGDSLKSISQALDIPMSTLHRHKVRLAQEGRLPEYVTFKKRGPMSKEMLKEKLTKAVQACLGDGMSQNHAANVFDVPKSTLWRHLQKKMFRSGNSNSITIKEEVVLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311727;
- 90% Identity
- iTF_00672949;
- 80% Identity
- iTF_00671689;