Basic Information

Gene Symbol
nfxl1
Assembly
GCA_955652365.1
Location
OY019134.1:37026359-37039810[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.57 8.3e+03 -2.4 1.0 4 10 196 202 196 202 0.96
2 14 8.4e-08 0.0012 19.5 17.0 1 19 210 227 210 227 0.99
3 14 1.6 2.4e+04 -3.8 2.1 5 10 252 257 252 257 0.95
4 14 2.8e-07 0.0041 17.8 12.1 1 19 263 282 263 282 0.97
5 14 5.4e-08 0.00079 20.1 12.4 1 19 317 335 317 335 0.99
6 14 2.3e-07 0.0033 18.1 9.9 1 18 370 387 370 388 0.96
7 14 4.5e-06 0.066 13.9 18.8 1 18 422 439 422 440 0.98
8 14 7.2e-08 0.001 19.7 13.0 3 19 451 467 443 467 0.85
9 14 0.03 4.4e+02 1.7 12.6 9 18 512 521 505 522 0.89
10 14 0.013 1.9e+02 2.9 5.4 1 11 534 543 534 544 0.95
11 14 1.5 2.2e+04 -3.7 1.3 6 10 603 607 602 607 0.88
12 14 6.9e-06 0.1 13.3 6.2 1 12 613 624 613 624 0.97
13 14 0.00044 6.5 7.6 13.9 4 18 654 668 652 669 0.94
14 14 2.8e-07 0.0041 17.8 10.8 1 18 720 739 720 740 0.89

Sequence Information

Coding Sequence
ATGTCATCGTCAACAAGCGTAACAAAGGGAAATAAACCCAAAGCACAAACGAAGTCCGATAAcaagaaaaatacgaaaaatttcaaggaaattcatcaaaaaaatatggaaatcgCTAAAAAGATAACTGAAAACTTTGAATCTAGTTCCGAGGAAGATGAAATCGatggaaatgaaattttggAAAAGATGTGCAGGAACTACACAGGCGGCAACGATCAACTGCAAAAAACTGCTGCATTTTTGGAGAATGTATTACAATCCGGATCAGCCATTTGCCTTATATGCATCGGATCAGTAAAGAGAATCGACTCGATTTGGTCATGCAAATACTGCTACTGCGTTTTTCATCTACTGTGTATTAAGCGGTGGGCTAATGACAGCATAAATCTGATGAAAAACAAGGGAACTGAAGAGCAAGGTTATTACAATAACATGGGTGAATATGTCCCCAAAAAGGAAAAGCTCATTAAATGGTACTGTCCACAGTGCCGCCGAGATTACGAACCCAACGACCGCCCAACCGAGTACCAGTGCTTTTGTAGAAAGGAAGTAAACCCGGTGAATCAAGAGTGGCTTATTCCGCATTCTTGTGGCGAAACGTGTAGCAAGCCTTTGCAGCCTCTGTGTGGACATAAGTGTTTATTACTCTGTCACCCTGGTCCGTGCCCACCATGTCCGCAAAACATTACGGTTGCCTGTAAGTGTGGGAAATCTGCACCAAAAGTTCTACGCTGCTTTCAGAAGAGTTGGACGTGTGAAAGGAAATGTTCCCGATTATTACCTTGTGGAAAACACCAATGTGACCAGTTATGCCATGATGCAGGTCAGTGTCCGGCTTGCAGCAAGACAAGTCTTCAGAAATGCGTGTGTGGATTGGAAGAAGAACTCCGTAGTTGTTCCCAGAGGGTTTGGCATTGCAAGAAGGTGTGCAACAAGAAGTATAGCTGTGGGATACACAGTTGTAAGAAAGTGTGTCACAGCGGTGTGTGCGGTGATTGCCCACTTAGTTTGCCAAGAACGTGCCCATGTGGAAAAACGAGGAAGTTGGCGCCTTGCACTGAACAAATAGAAAGTTGCAACGACACGTGTCAGAAGCTCCTCTCATGTGGGGTGCACTACTGTAGTCAGCGCTGTCATAAGGGAGACTGCAGCTTGtgtACAATCATCACAAAGAAAACCTGTCGCTGTGGTTTGCACGAGAAAGAAATGCCTTGCTCTAAGAATTTTCTCTGTGAAACTAAATGCAAGAGGATTAGGGATTGTGGAAAACATCCCTGCAACAAGAAGTGCTGTGACGGACAATGCCCGCCATGTGATAAAATTTGTGGCAAAATACTGTCTTGCAAAAAACACAAGTGTAGCTCCGTGTGTCACGACGGTCCCTGCTATCCTTGCAAAATAAAATCTCAAGTGAACTGCCATTGTGGCACTACTTCCGTGACCGTTCCTTGTGGTAGAGAACGCAAAGCACGACCAGCGTGCATGCAGCTTTGCAGAATAGCTTCCAAATGTCACCATCCAAACAAGCACAGATGTCACAAAGGTATGTGCCCGCCATGCAATCAAGTGTGTGGTCtaaaaatcgaagaaaacaaTTGTGGCCACATATGCGAGGCGCGCTGCCATGCTGCGGTTAGAACCGCAATCAAACAACCTAGCACAAACAATGCTTTGGAATACAGGGCGGACACCtaCGAGATAAGGGCGTTGCCGCATCCTAGGTGTGAAAAAAAGGTTATGGTAGCCTGTATTGGAGGCCATGAAATTTGTGAGTGGCCATGTTGGAACTCTAAGCCGACCTCCTGTCAACGCACATGTGGACGTCTGTTAAAATGCGGTAACCACACCTGCAAGTTGGTGTGCCACAGTGTGCCAGACATCAATCTTAATCTTGCACAAGAAGGCTGTGAACCATGCACCGAGATGTGTCAGATCGAGCGCCCTCAAGGGTGTCCTCATAGATGTAAAAGAGCCTGTCATCCAGCACCCTGCGACCCATGCGCCGCCATTATAAAGACTCCCTGTCATTGTGGACTTTCTTTAGTTCTCTTCAAGTGTTCCGAGTACAACAATTTGGGTTGGACTCCAGAAGAAATGTCCATGCaacaagaaaaactaaaaagttGCGGAAATCGGTGCATTAAGAATTACCCATGTGGCCACCGTTGTTCTGCAGTCTGTCATTCCGGGGCATGTCCTAATCCAGACAGTTGTCGCAAGAAAGTAAAAGTCTATTGTGAGTGCAAGCGGATTAAATCGGAAATATCTTGTGATAAAGCTCGTGACTGCGCACTCTTGCCCTGCAATGAAACGTGCATGGCATCCAAAGCAGCTGAGGAAAAACTGAGGCAGCAGAGAGAAGAGAAGCAAAGACTTGAAGAAGCGGAACGCAATCGTCTTGAACTGGAACAATTCGAGAAGAGATTCGGAAAAAAAAAGCCCCGAGAACGAAAGATTCAGCCGCAGGAAGTCAAAGCAAGCTCCAATCGAACACAGGTTTTAATTGCAGCTGCAATTGCAGTGGCTGCAGTGGCAGCTATagATTTGTGCACACATCCTCCACTGCTGCGTATTATggaacaaaaatgtatttcatctGCTGATATTGATTCAACTGGTTGCCATACAAACACCAAAACAGAGACGGCAACAACGGGTGGTACGCCGGAAAAAGTGGCACCAACCGCACCCTACACTAGGTCCCCTCAAATGTCGTCCACAAAGAACGATCTGCAGCTGCTGCAACCACACAAAAAGAGTGCATGTGATAAGAAAATTTTTGAGAAGTACGAGATACTAAAACAGAAATCAAATTCACATGAGAGAGACGATGGCGGTGAGAGCGACAGCGAACGAGGTTGCAACTTATCTATGTCAACTCCTGCCGCGGAAAATGTGAGACTGTTCAAGGATGATGATAGTCGTTCAGGGTCAAGTGATGATGTCACGACACCTCACATGGATGTTCACTACCTACACCACCAGCGTCATAAACAGCAAAATGGTTCCGAGTGCAATGACGACGAAACTCCAACTTCAACGAACACACTACAAGTAATTCAAGATCATCGTCGTTGCCACGAATTGGAGAACGGTGCAGGTGTGGGAGTCGGCATTTATTTGGAGACCCCCGTTGTGGACGAACAAATTATTGGCCTTAATAGTCATGATTACGAGAAGGCTAAACCAAAAAGACTTAGCGATGAGTTTCTTCTGTCGTCGGAGGACTGCTGCGACGACGATCGAAACAGTAGTAATGATAGTAATCCCCTAGGAATTcatagtagtagtagtaataaGAGCGCCGATTGTAGTGTTAGTAATAGTAATATTAGTGTAATTCAGAAGAAAAGTGAAATACTGAACGACTTACTGAGGTCTGTCATGAGTACTGATAGCGAGGTTGTAAGTGCTGACGCGGACGGTGCCGTTGGTTACTCTGAATCTCAGTTCAAGGCGACCGATGAGGATGTTGATGTGCACGCTGCTCCAAGTGGAAGCATGTCGTTTCGGTTTAAGAACATCAAAATCGGTTACAATCCATTTAGTGGCACGAGCGATGGTCTAACGGACGCCGATACGATCCCAATTGATGTGACGGACAACGATGTGCAATCGATGGACGCTATTGAACGTCGAGACTTTGAACACGAACAACGCCTCACTGGGGGAATTATTCTCAAGTCGAATTCGTTAATTAAAAACGACAGACTTAAGCTGGATCTACTCCAGTCAAATATTCAGAACGCTAAGGGCGATGAAAGAGTAGTCTCTTCGGACAGCAAGTGCACATACAAGGATCACTCGACAACACCAACGAGTAGCCGTCATTGCAACAGCAGATTGACTAAATCAacagcaaaaataaacttaacatCAAGCCTAAGTCATTCAGAGATAATCACTAACGGGGATGAAGTGAGTGAACAGAAGGAGAGTCAGAATCAGGAGAATGAATTGCTGGACAATAACAGCACATCACCAAATGATCTTCACCGCAAAGTACAACAGGAACATGAACCAGGTTCGAGCAAATCAATTCAGGAATCATTGTTATCGTCATCGTCGGCAGTGGGGTCATCtgtgtcaaaaaatatttcaaaacgacCCGCAAAGTTGCGTTCTGCGGCTTTAGAAGGCCCtgtgaaaaacttttttgaattatttacaaaCGGAAACTCAAACGATAGCCTTACGTCGGAACACTCGTACAGTACCTCATCCAGTCATTCCTTGTCACATTTAACCAAACAGCAGGAGCCGAGTTGCAGCGGCGTCAGTAGCAGTAGTAGTCTAAACCCAGATGAAGAGCTAGTTAAAAAGGAGGAAGAGGAAGCTGAAACGATTCAAGCTTTGCAGCAGAAGTCTGACGTgggcaatgatgatgatgttgcgaCTACATCTTCATCAGCACGTTGTCAATACCCCGCCGTAAGGTACATGCGCAATTCGCAGCGCAAAGATAGTCAAAGTGCGCTAAATGGAGGAGATGATACTGGTCCACTGAATACCCTTCGTCCCTCACAAAGACGCGCCATCTCCCCCACGAATGCAGTGTCTGCAATTTTCGCTCTTGCTAACAGTAATGGTTCGAATCACCATCAGCAGTTAAATTACGATGCAGCACCAGTTCATCAGAATGGGACCGAACAGCCacaattagaaaatgaaatgcaCGAGAATGAGTTCGACGAGGAAACATGGGCTGACTGCGAAGAGGGTTCTGATGAAGAGGTATGCACCTGTCATAAGGACAACCTCTCCAGTCACGGCAAACGTGATACGTCAGATATGCTTTCGGAGGAAGGGCTCTCAAAAGATGTGGAGCTATCAGGCTACATTCAAATGGTATCGATATCAGAGGACACTATGTCCCACGAGCAAACGATGTCACCGGAGTACACAGGTCTGCaacgaaaaaggaaatttaatgaAAGTCGTGCCGTAGATACTGACAGCTACTTGGGCGATACGGTCAGCGGCAGAAAGAGAATTGCGTACGACTACTCCTCAACGCCAAGAAGTTCTCAGAGCCTAATACTAATTACAAGTCCTTCAACGCCCCTAGGCCGACGCACACCTCGTTCCATTATACCCACAAGAGATAATCCGCCACCAGAGCTTCAAGACTGGTTGTTGCAATTCCAGCGATGGTCGCATGCTGAACGGCTGCTCGCCGTCGATAGACTGATTGAGCATTGCGAACCTACGCAAGTTCGTCACATGATGAAGGTGATTGAACCGCAATTCCAAAGGGACTTCATATCACTGCTGCCACGTGAGCTAGCCCTCCAGGTGTTGGCGTATTTGGATCCCAAAGATTTATTGCGAGCAGCACAGACATGTCGCAGTTGGAGATTCCTCTGCGACGATAACTTGTTATGGAAGGAGAAATGTCGTAAAGCACAAATCCTAACGGAACCGAAAACAGATAGACCAAAGCGTGGTAGGGCAGGAAATATGCCACCAATCGCATCACCATGGAAAGCTGCCTACATGCGACAGCACATAATCGAATCAAACTGGCGGTCACGACCGATTCGCGAACCAAAAGTGTTGAAAGGTCATGACGACCACGTGATCACGTGTTTGCAGTTCTTCGGCAATCGCATAGTTTCCGGTTCAGATGATAATACGCTTAAAATATGGTCAGCTGTCACTGGGAGGTGTCTTCGTACATTGGTTGGGCACACTGGTGGAGTTTGGTCATCACAAATGTCGGGCAATGTAATTATTTCGGGTAGCACAGACCGCACACTTAAAGTCTGGGATATGGAGACGGGCTCGTGCATACACACTCTGTTAGGTCATACATCAACTGTAAGATGTATGCATTTACATGGCAAAAAAGTCGTCAGTGGTTCAAGGGATGCTACACTACGCGTGTGGGACATCGAAAGAGGGAGTTGTTTACATGTTCTTGTTGGGCATTTAGCAGCAGTTCGATGTGTGCAATATGATGGAAAGTTAATAGTGTCGGGTGCATATGATTACATGGTAAAAATATGGCATCCAGAACGTCAAGAGTGTCTACACACTTTGCAAGGCCACACAAATAGAGTTTACTCCCTACAGTTTGACGGAGTTCACGTTGTATCCGGCTCACTGGACACATCCATACGAGTTTGGGACGTTGAAACAGGAAACTGCAAGCACACTTTAATGGGTCATCAAAGTTTAACATCCGGAATGGAATTGCGCCAAAACATACTCGTCTCCGGAAACGCTGACTCAACTGTGAAGGTTTGGGACATAACAAACGGACAATGCTTGCAGACTTTGTCAGGGCCAAATAAACATCAATCGGCGGTTACGTGTCTACAATTTAATTCTCGTTTTGTTATAACGAGCTCAGACGATGGAACCGTAAAGCTGTGGGACGTAAAAACTGGGGAGTTCATAAGAAATCTTGTAGCCTTAGACTCTGGTGGTTCTGGCGGTGTCGTCTGGAGAATCAGagCAAATGATACAAAACTTATATGCGCAGTAGGATCCCGCAATGGTACAGAGGAGACAAAACTAATGGTATTGGACTTCGATGTGGAAGGTGCCTGTGTTAAATGCTCATAA
Protein Sequence
MSSSTSVTKGNKPKAQTKSDNKKNTKNFKEIHQKNMEIAKKITENFESSSEEDEIDGNEILEKMCRNYTGGNDQLQKTAAFLENVLQSGSAICLICIGSVKRIDSIWSCKYCYCVFHLLCIKRWANDSINLMKNKGTEEQGYYNNMGEYVPKKEKLIKWYCPQCRRDYEPNDRPTEYQCFCRKEVNPVNQEWLIPHSCGETCSKPLQPLCGHKCLLLCHPGPCPPCPQNITVACKCGKSAPKVLRCFQKSWTCERKCSRLLPCGKHQCDQLCHDAGQCPACSKTSLQKCVCGLEEELRSCSQRVWHCKKVCNKKYSCGIHSCKKVCHSGVCGDCPLSLPRTCPCGKTRKLAPCTEQIESCNDTCQKLLSCGVHYCSQRCHKGDCSLCTIITKKTCRCGLHEKEMPCSKNFLCETKCKRIRDCGKHPCNKKCCDGQCPPCDKICGKILSCKKHKCSSVCHDGPCYPCKIKSQVNCHCGTTSVTVPCGRERKARPACMQLCRIASKCHHPNKHRCHKGMCPPCNQVCGLKIEENNCGHICEARCHAAVRTAIKQPSTNNALEYRADTYEIRALPHPRCEKKVMVACIGGHEICEWPCWNSKPTSCQRTCGRLLKCGNHTCKLVCHSVPDINLNLAQEGCEPCTEMCQIERPQGCPHRCKRACHPAPCDPCAAIIKTPCHCGLSLVLFKCSEYNNLGWTPEEMSMQQEKLKSCGNRCIKNYPCGHRCSAVCHSGACPNPDSCRKKVKVYCECKRIKSEISCDKARDCALLPCNETCMASKAAEEKLRQQREEKQRLEEAERNRLELEQFEKRFGKKKPRERKIQPQEVKASSNRTQVLIAAAIAVAAVAAIDLCTHPPLLRIMEQKCISSADIDSTGCHTNTKTETATTGGTPEKVAPTAPYTRSPQMSSTKNDLQLLQPHKKSACDKKIFEKYEILKQKSNSHERDDGGESDSERGCNLSMSTPAAENVRLFKDDDSRSGSSDDVTTPHMDVHYLHHQRHKQQNGSECNDDETPTSTNTLQVIQDHRRCHELENGAGVGVGIYLETPVVDEQIIGLNSHDYEKAKPKRLSDEFLLSSEDCCDDDRNSSNDSNPLGIHSSSSNKSADCSVSNSNISVIQKKSEILNDLLRSVMSTDSEVVSADADGAVGYSESQFKATDEDVDVHAAPSGSMSFRFKNIKIGYNPFSGTSDGLTDADTIPIDVTDNDVQSMDAIERRDFEHEQRLTGGIILKSNSLIKNDRLKLDLLQSNIQNAKGDERVVSSDSKCTYKDHSTTPTSSRHCNSRLTKSTAKINLTSSLSHSEIITNGDEVSEQKESQNQENELLDNNSTSPNDLHRKVQQEHEPGSSKSIQESLLSSSSAVGSSVSKNISKRPAKLRSAALEGPVKNFFELFTNGNSNDSLTSEHSYSTSSSHSLSHLTKQQEPSCSGVSSSSSLNPDEELVKKEEEEAETIQALQQKSDVGNDDDVATTSSSARCQYPAVRYMRNSQRKDSQSALNGGDDTGPLNTLRPSQRRAISPTNAVSAIFALANSNGSNHHQQLNYDAAPVHQNGTEQPQLENEMHENEFDEETWADCEEGSDEEVCTCHKDNLSSHGKRDTSDMLSEEGLSKDVELSGYIQMVSISEDTMSHEQTMSPEYTGLQRKRKFNESRAVDTDSYLGDTVSGRKRIAYDYSSTPRSSQSLILITSPSTPLGRRTPRSIIPTRDNPPPELQDWLLQFQRWSHAERLLAVDRLIEHCEPTQVRHMMKVIEPQFQRDFISLLPRELALQVLAYLDPKDLLRAAQTCRSWRFLCDDNLLWKEKCRKAQILTEPKTDRPKRGRAGNMPPIASPWKAAYMRQHIIESNWRSRPIREPKVLKGHDDHVITCLQFFGNRIVSGSDDNTLKIWSAVTGRCLRTLVGHTGGVWSSQMSGNVIISGSTDRTLKVWDMETGSCIHTLLGHTSTVRCMHLHGKKVVSGSRDATLRVWDIERGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGVHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITNGQCLQTLSGPNKHQSAVTCLQFNSRFVITSSDDGTVKLWDVKTGEFIRNLVALDSGGSGGVVWRIRANDTKLICAVGSRNGTEETKLMVLDFDVEGACVKCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-