Basic Information

Gene Symbol
gatad1
Assembly
GCA_955652365.1
Location
OY019132.1:60123006-60123807[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.5e-08 0.00031 21.0 0.5 1 26 9 32 9 34 0.94
2 2 0.018 59 4.1 0.2 1 17 29 45 29 48 0.89

Sequence Information

Coding Sequence
ATGCCACCAAAATTACAGccaaaatgttttcaatgtGAAAAGACTGAGAGTCCAATGTGGCGAAGCACAGATCTTGGACAATTATGTCAGGATTGCTACGATCAAAATACTAGCAATATCAAAACAGAACCAGACGCAGATAATGGAGAAAGTTCAAATGGCAATAATAATGGCAACAATGGAGATGAGAAAAAGTTGCGAAAGAGCACACGAGCAACGAGATTCAAGACAAAGGCTGGCGGCGCAGGCGGCCAGGCAAAGAACGTGCCAAAGGGACGAAAtcgaagaaatattttcaaaaagaccCCAATGAAGACACCAATTGTCCAAGCTTCTACTCATACCGTTGAGTCCTTATTCTATAAGGGCTCCTATCTCCAAGTCGGTGACATAGTGTCTCTAATGGACGCCGAGGAGAACGTGTACTATGCACAGATCCGGGGTCTCTTGGTCGACACATACTGCGAAAAGTCCGCCTACCTGACGTGGCTTATACCAACACAAGCCAGTCCTCATCCCAATGACGGCTTTGACGCAAGCACTTACCTAATTGGACCCGACGAGGAGCACTCAAGAAAGCTTTCCTGCTTGCAGTTCGTTATGCACGCACCAAGCAACTATTACCATGACAAGACCACCCCGTTTCCCCTGCCGGATTCAATGGATTTCGACACTAAGCCTGGCGGTTTCATCTGGACGACGTTGCCAGAGTACGAACGAAACAAAAACCGACGAGAGTTAGAGACTTAG
Protein Sequence
MPPKLQPKCFQCEKTESPMWRSTDLGQLCQDCYDQNTSNIKTEPDADNGESSNGNNNGNNGDEKKLRKSTRATRFKTKAGGAGGQAKNVPKGRNRRNIFKKTPMKTPIVQASTHTVESLFYKGSYLQVGDIVSLMDAEENVYYAQIRGLLVDTYCEKSAYLTWLIPTQASPHPNDGFDASTYLIGPDEEHSRKLSCLQFVMHAPSNYYHDKTTPFPLPDSMDFDTKPGGFIWTTLPEYERNKNRRELET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-