Eaen020951.1
Basic Information
- Insect
- Eristalinus aeneus
- Gene Symbol
- -
- Assembly
- GCA_955652365.1
- Location
- OY019133.1:68976981-68981032[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 2 2.9e+02 2.9 1.9 3 22 665 684 663 687 0.90 2 11 0.017 2.5 9.4 0.2 2 21 709 728 708 729 0.92 3 11 0.069 10 7.5 1.3 1 23 749 773 749 773 0.95 4 11 0.051 7.3 7.9 2.0 1 23 778 802 778 802 0.92 5 11 4.6 6.7e+02 1.8 0.1 3 23 823 843 822 843 0.91 6 11 1.5e-06 0.00021 22.2 2.1 2 23 857 879 857 879 0.97 7 11 0.16 23 6.4 0.9 1 16 884 899 884 905 0.83 8 11 9.5 1.4e+03 0.8 0.1 2 23 935 956 934 956 0.81 9 11 0.004 0.57 11.4 1.0 2 23 974 994 973 994 0.95 10 11 9.8e-06 0.0014 19.6 2.0 1 23 1000 1023 1000 1023 0.98 11 11 0.058 8.4 7.7 0.5 1 14 1048 1061 1048 1064 0.90
Sequence Information
- Coding Sequence
- ATGCTCGAGGAGGACCTCGATGATACACACTTGTGCATCAAGTGTAGCTCCACCATTGTCGGCCTCGATAATTACATCCAGCATCGGAAGTCGGGATGCGGCGGGAAGTCGTCGCGATCCGCAATTGTCACCGGCTACACGGGATTCGGGTATGCCCACGCGGCTGTGTACCCTAAGCCCGGGGAGGACTCGAGGGAGAAGTCATCGAAGGCCGATCCGTACGACCTGCCATATGAACTGGGCGCCGATGTGTTCTTCTCCTCACTCCAGTTGCAGAGCGTTCAGGCGACTGGAGGCAGTGCCAGTGGAGCCGGGAAAACCAGCTCTAGACAGCAGCTGATTGCGGTGAAGGATGTGCCGAGGGAGGAGGTCGAGGGGGAGTGGCAGGAGAACAACACCGACAACCTGATGAAGGTGGTGCGCGACATTAGCGAGTCGAAGAAGTTTGAGCCGATTTTCAAGCCGATCCCCTTCACGCACAACGAGTCGCCGGAGCCTGAGCAAAgcgatgaggaggaggacgaggacgaggtcTTTGAGGAGGATGATGAGGACGACGAGGACTACGTTCCGACTCCGTATAGCGGCGGCAAGTGGAAGCCGGGAAGTCAACCCCCACCCAGAAGTGGAGGAAAGTGGAAGAAGACTCTTGTGGACGTGCCTCCTCCGCCCCAAACTGGTGGCAAGTGGAAATCCTTCCCCAAGGTCGGTTCATCTGAGAAACCCGTCCCCGAGTGCGGTGGTAAGTGGAAGGCAGGTTGCTCCAAGTGGAAGGTCACTACCAGGCAGGAGTCGCCGGATATCCTTGAGGCGCAGAcgggtggaaaatggaaacCGGGATCAGAAGCCGGTCGTAAGAAATTTTTCGATTCTGGTCAGGAATCGCCCACCACCATAGAAGAGTCGACTGGCGGCAAATGGAAGCCCGGCTGTTCGAAAACGGTTCCAGAGAGTGGCGGGAAGTGGAAGCCTGGCGAAAAGCGAAAGTCGTCCGATGATCAAGAGTCACCCGAAGGCAAATGGAAGCCCAGTTCCTTCAAACGCCTCAAGCTGCCACCATCTCAGTCCACTAGTGGCAAGTGGAAGCCAGAAGACGACCAGGAATCTCCCCTCATGCTGGGCGATCCAAGCTGGAAGCCAGAGATCTTGAAAACTCCGAAAGCTGAAAAGTGGAGCTCAGTAGGAGGGCAGGAGTCCCCGGAGTTCCTGGAGCCCCACACCGGCGGCAAGTGGAAGCCGGGACAACGTCCAGGAAGCGACATTCCAACCGGAGGCAAGTGGAAGCCCGGTCATCCCCCAACCGGGGGCAAATGGAAACCCGGCCATCAACCGGAGATTGATGACAGCAAATGGAAGGAGACCCCGTGGGATGACCAAGAGTCGTGGGAAGATCCCGACCACTCCCATCCACCCGCAGACCACACAAAAGGCAAGTGGGTCCCAGGAACCAAAATCGACCGGCTCCAGTTCAAAGAAGCAGAGGTCGTGCCACCCCCTCAGGACTTCTGGTGCAACATCTGCTGCCGCAAACTGAAGACGAAGAGCATCTACGACAAGCACCTCCTTTCCAACGCTCATCTGCGAAAGTCCGAAACCGAAGAACAGCTTGAACGCGTTGCCGTTGAACAACTGGAGCTCTCACACCGTATCCTCCAGCCCCCAGCGCTCCTCCTAGAACGAGCAGCCTCCCCAGAGCCGCAGCCGGGAAAGCGAAAGCGACGGAAGATCTTCATCAAGTGCGACATCTGCAAGTACCGCATGCAGCGATTCCTCGTCGGCAAGCACCTCATCTCCCACTATCACTTCGTCCGCATGGTGGCGCAACCTCAGCGCTCTTTCACCATGATCCTCGAGTACATCCACCAGATAGTCCTCCAGTCACCGTACCAGTGCGTCCCGTGCCGGTTCTTCACCAACACCGAGGAATGCTTTCTGCTCCACTGGAACTCGGCGGACCACCGCGACAAGACCGAGGGTTCCGGCAAGTTCTGGTGCAGCTTCTGTCGGTTCGAGTGCGAGGACAACAACCAAATGCGGAGACACCTGCTCAGCGCAGACCACCGGGAGGTTATCCTGGCCATCAACCGCTCCGTCCCAATATGCATAACCAAGAAGGTAACCATCGAGTGCCCCAAGTGCCTTCAGGGATTCCGGTACAACATGGAACTGCGGCAACACACCTCCCGGTGTGACCTCGCCTCTGTGGAGCCCATTGGAACCGCCTCCGATGAGTATCAGTCCAGATTCCGGTGCGAGTTGTGCCCCGAGGAGCGCCTGAAGTCGAAGACCGCCCTGCAGAGGCATCAGAAATTCAAGCACAACCAGCACAGGTTTCACTGCCACGTCTGCGACATGGAATTCCAGTCGGCCAACGAGGCAGTGAAGCACCGAAAAACCAGTGTCCATAAGAAGGCGGCCGCCGACCGCCAGCCTCAGGTGAAGAAAGGCCCAGCCTTCAAGCCTGCCTGTGAGCAGTGCGATCATGTATCCACGTCGGAGATGGAGGCGGTCCTCCACCGCATCATCCACCCCGACAACGTGAAGCCAACGACCAAGCCTACTGCCCGGAAGTGTCCCCACTGCCCGGAGACGTTCAAGTCGAAATCGGAGCTGAAGTCCCACCTGACCACCGTCCACCCGGACGCAATGCACGCCTGCCCCCTCTGCGGAGAGTGCTTCGTCCTGCCCCACGAACTAGGTTTCCACAGACGGTACAAAATATGCGTCGCCAACCAACAGCCACAGGCCTCAGCGATCCCTTCCACATCGCAGGCAAAGGAAGCGACCTCGACGAAATCCTGGCAATGCTCAGATTGTCCATTCCAGTCCGACCTCGAATCGGAGCTCATCTTCCACCGAATCATGCACACCCACGGGGTGGAGGCTCTGCAGAGCACCACCGGTCGCGGCGGTAAATTGAACTGCCCCCTCTGCGAGAAGGCATTCCCCAGGCACTCGTTGCGTTACCACATCCGCCTGCACACCAACGAGAAGATGTTCAAGTGCGAACTCTGCGAGGCGGCGTTCGCCAGGCGGCACAACTACAAGGATCACATGCGGACCATGCACGAGAATGCGGACAAGAAACTTTCGGCGCGGTCAGTGGCCGCCACCACTTCTGCCGCTGTCGCCGCCGAGAGTTTCGTGTGCGATACGTGCGGCAAGCTCTTCCGAACCAAAAAGAGTGCTCGCTTTGGCCCCAAGGACCTTCGAATCCAAGACACTGGTACAGTGCAACATGCACTGTCCCCGCTTAAAATGGTGCagaacctcaaccaaaatgGTGTTGAGGGCTGGAAAGGCAGGTTCGTTGAGGCCCTGGTTGTTCCAAAGAACTAG
- Protein Sequence
- MLEEDLDDTHLCIKCSSTIVGLDNYIQHRKSGCGGKSSRSAIVTGYTGFGYAHAAVYPKPGEDSREKSSKADPYDLPYELGADVFFSSLQLQSVQATGGSASGAGKTSSRQQLIAVKDVPREEVEGEWQENNTDNLMKVVRDISESKKFEPIFKPIPFTHNESPEPEQSDEEEDEDEVFEEDDEDDEDYVPTPYSGGKWKPGSQPPPRSGGKWKKTLVDVPPPPQTGGKWKSFPKVGSSEKPVPECGGKWKAGCSKWKVTTRQESPDILEAQTGGKWKPGSEAGRKKFFDSGQESPTTIEESTGGKWKPGCSKTVPESGGKWKPGEKRKSSDDQESPEGKWKPSSFKRLKLPPSQSTSGKWKPEDDQESPLMLGDPSWKPEILKTPKAEKWSSVGGQESPEFLEPHTGGKWKPGQRPGSDIPTGGKWKPGHPPTGGKWKPGHQPEIDDSKWKETPWDDQESWEDPDHSHPPADHTKGKWVPGTKIDRLQFKEAEVVPPPQDFWCNICCRKLKTKSIYDKHLLSNAHLRKSETEEQLERVAVEQLELSHRILQPPALLLERAASPEPQPGKRKRRKIFIKCDICKYRMQRFLVGKHLISHYHFVRMVAQPQRSFTMILEYIHQIVLQSPYQCVPCRFFTNTEECFLLHWNSADHRDKTEGSGKFWCSFCRFECEDNNQMRRHLLSADHREVILAINRSVPICITKKVTIECPKCLQGFRYNMELRQHTSRCDLASVEPIGTASDEYQSRFRCELCPEERLKSKTALQRHQKFKHNQHRFHCHVCDMEFQSANEAVKHRKTSVHKKAAADRQPQVKKGPAFKPACEQCDHVSTSEMEAVLHRIIHPDNVKPTTKPTARKCPHCPETFKSKSELKSHLTTVHPDAMHACPLCGECFVLPHELGFHRRYKICVANQQPQASAIPSTSQAKEATSTKSWQCSDCPFQSDLESELIFHRIMHTHGVEALQSTTGRGGKLNCPLCEKAFPRHSLRYHIRLHTNEKMFKCELCEAAFARRHNYKDHMRTMHENADKKLSARSVAATTSAAVAAESFVCDTCGKLFRTKKSARFGPKDLRIQDTGTVQHALSPLKMVQNLNQNGVEGWKGRFVEALVVPKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -