Eaen018083.1
Basic Information
- Insect
- Eristalinus aeneus
- Gene Symbol
- znf598
- Assembly
- GCA_955652365.1
- Location
- OY019133.1:12973477-12980306[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.8 2.6e+02 3.1 1.9 1 23 113 137 113 137 0.91 2 12 0.001 0.14 13.3 0.7 3 23 184 205 183 205 0.98 3 12 0.1 15 6.9 2.9 2 23 210 234 206 234 0.87 4 12 7.8 1.1e+03 1.0 0.0 6 23 941 958 941 958 0.87 5 12 0.00021 0.03 15.4 0.3 1 23 964 988 964 988 0.98 6 12 2.6 3.7e+02 2.6 7.5 1 23 996 1018 996 1018 0.95 7 12 2.5e-07 3.5e-05 24.7 0.1 1 23 1026 1049 1026 1049 0.98 8 12 0.001 0.15 13.2 0.5 3 23 1057 1077 1056 1077 0.96 9 12 3.4 5e+02 2.2 2.3 2 23 1086 1107 1085 1107 0.92 10 12 0.0029 0.41 11.9 0.9 1 23 1114 1137 1114 1137 0.96 11 12 4.5e-06 0.00066 20.7 0.8 1 23 1143 1165 1143 1165 0.97 12 12 0.0016 0.23 12.7 1.5 1 23 1171 1194 1171 1194 0.97
Sequence Information
- Coding Sequence
- ATGAGTGACACCAACATTGAGAAGAATTCCAAGTCGTCGGTGGTTTCCGATAATAATGAGAATATTTGCATCGTTTGTTGCAAGAATGTCGAAATCTATTCAATTGGAGAATGCGATCATCCTGTGTGCTATGAATGCTCAACAAGGATGCGAGTTCTATCAAAACAACTTGAATGCCCCATTTGTAGGCAGAGTTTGGCTAAGgttatatTCACTTATGACAAGCTGTTATATCGCGAATTGGAAGCGAAGAATCGAGTTCGGCACTACAACCAAAAATACAAGATATGCTTCCACACCAAGTCAATTCAAAACGCATTCTACAGTCTGTTGGATCATCCGTGCCCAAAGTGCAATCATCCACCGTTTCGTAAATTTACAGAACTTCGTGATCACGTACTCAGGGAGCATGATCTTCATTACTGCGACTTGTGTACGgacaatttgaaaatattttcattcgagCGACGATGCTATACGAAGGCGGAGTTGTCATTGCATCGGCGAAAAGGTGATCCAGATAATCGATCTCATCGCGGTCATCCGTTATGTGAGTACTGCGATAGACGTTATCTTGATCGCGACGAACTATTTCGTCACTTGAGACGGGAGCACTATTTTTGTCATTTCTGCGAAGCAGAAGGATGTAATGAATTTTACAATGACTACGCTTCGTTGAGAGAACACTTTCGCAAGGATCACTACCTATGTGAGGAGGGTAAATGTGCCACGGAGGAATTTACAGGAGCTTTCCGAACGGAAATCGACTACAAGGCACACGTGGCTAATGTGCATGGGAAGTCGCTTAATAAGCAGCAAGTGAAGCAGGCGCGTACCCTGCAGTTGGAGATAACGCTGGGTCCGCGGGGACGTTCGGGGCAGACGGAACCCCACATTGCTAGTCTTCGGTCAAGAGGAAACGACGAAAATCATGAACTTCAGCCTGAAGCAATACAAGTGACCACATTGCAGAAAGCGCCGCCCATCGATGCGCGAAATGAACAAGAATTCCCCTCCCTAGGCGGAGGCACCACTTCCACCTTGACCCTCTTACCACCAGCGATGACCATGCATACGCGATTTGGTGCATCGGGTTTGGCAAGAACGAAAGAGAACTTCCCTGCTTTAGGTGGCACCGAtagtggcggcggtggtggcgGATCATCCAAATCAGTAAGCCGTCCAAACCAAACATCAATTAGTTCAGTGATCAAAAAGAGCTCGGCATCTACCCCGACCAGCATTCACGTCTCAAATCGTCCAAGCACAAGTGCAAGTTCCACCAAAAAACCAAATCCATCAAACAAAAGTGATTTTCCGGCTCTCCCAGGGACCTCAAAGAACGCCGCCCAGGCTGCATACCGTGAAGACATGGTGCCATCGAACTCAAACATCAACATGAATTGTGTATCAGCCAAGCATCGTGCCCTGATGGATGATTATGTTTCAGTTGCGAACCCAAGCAACTTCAGTAAAATTCAAGTCATGCAACGCGAGGCTGAGGAGCAAAAGGCCAAAAAGGCCCTAAAAGAGGCCAGTGCACCAAAACTAAATTCACAAGATTTCCCAGCGCTTGCCATGGGACCAAAACCAACCGCCCCAGTGACAGCTAGTTGGACAAAGACGCAGAAACAGCGAGATGCTGAGAATCGGAAATCAAAGGTCGCCCCCGCACCGGTCCTTACAAACAACATaaatgcaaagcaaaaaaattcgaagaataatCAAAATGGCAACAGTGGCAATAACAACACCAACACCTCAACAACAGAAAGCAACagcaaaaaggagaagaagaataaaaaagcaGGGGATGAAGGAAAGAAGTCCCCCGACGCAATCAGCAATAGCAAACAGAAGAAAGAGAACAACAACGAGAACAAACCAATGAACGCCAATGTACCAGCACTTGTAAATAACGGCAATGCAGGACACCTGACACAAGACACCCAACCCAGTGAAGCAAACTTTCTGCAACGACCCGTTGCCCCACCGCCCGGTTTCAACTTCCCACTGCGACCACCACCCGGTTTTCAAAACGTCACCCTCAAGTCTGTGGCCAAATCACCCAACGATCTCACATTTACGAATTCTTTGGGTGAGAGCTATAACATTGTACCGACTCACAGCTACATTCAACCACCGGAGTCAATTACAAGAAATCAGAGACTAGTTACTCACTTCAAGGAAGTCCTACACACACCAGAGGCCTTAGAAGAGTTTCGTCAGATTTCTCTCAAGTTCCGCGAAGGCGTCTACAAGGCTGAGTCATACTACAAACActgccaagctgtgcttaaggatcaattttatgttttattccCCGAGCTGCTTTCACTCGTACCAGATATAAACAAACAGCAGGCTCTGTATTTGGTGCACTCACAACACATAAAATCGCTGCCGAGCGAAGAAAGCAAACGATTCCCAAAGCTAGAGGTATGCTCAATATGCAAACAAGTTCTTATGGCATCCGATGCAAGCGACCACAACAAACTTCATGCCCTGCACGACAGCTTCCCCGGACTGGGGAGTATCGACGTAAAGGCTAACAATACTCTTGCCAATGCGAATCGAAAACCGAAGAAATACGTTATTTGCGAAGAAGAGATAACAAAGCATGAAGGCAACCTCACATTGAACAGTCAAAAGAACGGACGAATTTCGAGGAGAGAAAAGGGCAATGAGGATAGCAATGAGAAGCTTATTAGTTCTTTCTTCTCACTTAATTGCGACCTCTGTCATGAGCATCATCAGTATTGTGAAAATCTGTTTAATCACTACGAATCTGCGCATAAGATTAGGGGCTTTATCATGTGCTGCGGGAAAAAGTtctacaaaatatcaaaagtaGCTGAGCATGTGGTATGGCACCAAAATCCGGAATTGTTCAGATGTTCGAAATGCGATCTCGATAAGATATTCCCAGACAAGAAGAGCCTAGAGGCGCACATGGTAACTCACATCGAAGCCAACGACAAAGTATTCCATTGCGAGTGTTGTGAAaaaacttttgtaaaaaaatatcgCTACGAGCAACACAAGTTGACACACTTACGTCCAGAAGAGAAGAAGTACACATGTAAAGATTGTGGGAAACCCTACGCAACGGAATCACTTTTGCGAGTTCACATTCGTGTTGTCCACACAAAGTCCTATGCGCGCATGTGTGAAATTTGcgcaaaagttttcaaaagccGCGTTTTCTTCGAAAAGCATCAGCTGGAGCACATGGGCAAAGCACTGCCTCGAGTGCAGTGTCAAATTTGTCATGCTTGGATGAAGAACGAACACACAATGCGTGCACACATGCGGCTGCACGATGACGAGGGTGCAGTGCACAAGTGCGAGCTATGTGGTAAGACAGGCCCATCGCGCAGCGCCATACTCAAGCACAAGCGATACGTGCATTTCAGCGAAAGAAAATTCAAGTGCACTCTGTGCGAAAAGGCTTTCAAGAGAGCGGTTTCGTTgaaagaaCACATGACTCTGCACACTGGAGAGGTTTTGTATAAGTGTGCGTTTTGTTCAAAGACTTTCAACTCGGGCGCCAATATGTTTGCCCACAAGAAAAAAGTTCATTATCCCGAATGGAAGATGGAAAAGGAGCATAATTCTAAATAG
- Protein Sequence
- MSDTNIEKNSKSSVVSDNNENICIVCCKNVEIYSIGECDHPVCYECSTRMRVLSKQLECPICRQSLAKVIFTYDKLLYRELEAKNRVRHYNQKYKICFHTKSIQNAFYSLLDHPCPKCNHPPFRKFTELRDHVLREHDLHYCDLCTDNLKIFSFERRCYTKAELSLHRRKGDPDNRSHRGHPLCEYCDRRYLDRDELFRHLRREHYFCHFCEAEGCNEFYNDYASLREHFRKDHYLCEEGKCATEEFTGAFRTEIDYKAHVANVHGKSLNKQQVKQARTLQLEITLGPRGRSGQTEPHIASLRSRGNDENHELQPEAIQVTTLQKAPPIDARNEQEFPSLGGGTTSTLTLLPPAMTMHTRFGASGLARTKENFPALGGTDSGGGGGGSSKSVSRPNQTSISSVIKKSSASTPTSIHVSNRPSTSASSTKKPNPSNKSDFPALPGTSKNAAQAAYREDMVPSNSNINMNCVSAKHRALMDDYVSVANPSNFSKIQVMQREAEEQKAKKALKEASAPKLNSQDFPALAMGPKPTAPVTASWTKTQKQRDAENRKSKVAPAPVLTNNINAKQKNSKNNQNGNSGNNNTNTSTTESNSKKEKKNKKAGDEGKKSPDAISNSKQKKENNNENKPMNANVPALVNNGNAGHLTQDTQPSEANFLQRPVAPPPGFNFPLRPPPGFQNVTLKSVAKSPNDLTFTNSLGESYNIVPTHSYIQPPESITRNQRLVTHFKEVLHTPEALEEFRQISLKFREGVYKAESYYKHCQAVLKDQFYVLFPELLSLVPDINKQQALYLVHSQHIKSLPSEESKRFPKLEVCSICKQVLMASDASDHNKLHALHDSFPGLGSIDVKANNTLANANRKPKKYVICEEEITKHEGNLTLNSQKNGRISRREKGNEDSNEKLISSFFSLNCDLCHEHHQYCENLFNHYESAHKIRGFIMCCGKKFYKISKVAEHVVWHQNPELFRCSKCDLDKIFPDKKSLEAHMVTHIEANDKVFHCECCEKTFVKKYRYEQHKLTHLRPEEKKYTCKDCGKPYATESLLRVHIRVVHTKSYARMCEICAKVFKSRVFFEKHQLEHMGKALPRVQCQICHAWMKNEHTMRAHMRLHDDEGAVHKCELCGKTGPSRSAILKHKRYVHFSERKFKCTLCEKAFKRAVSLKEHMTLHTGEVLYKCAFCSKTFNSGANMFAHKKKVHYPEWKMEKEHNSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00671813;
- 90% Identity
- -
- 80% Identity
- -