Eaen025966.1
Basic Information
- Insect
- Eristalinus aeneus
- Gene Symbol
- -
- Assembly
- GCA_955652365.1
- Location
- OY019134.1:60845416-60851509[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.13 19 6.6 3.4 1 23 165 188 165 188 0.97 2 10 0.014 2 9.7 0.0 2 23 200 222 199 222 0.95 3 10 1.9 2.7e+02 3.0 2.1 2 21 773 794 772 796 0.91 4 10 0.66 95 4.4 0.6 3 20 806 824 804 828 0.91 5 10 1e-06 0.00014 22.7 2.6 1 23 864 886 864 886 0.98 6 10 0.018 2.6 9.4 4.1 1 20 898 917 898 919 0.93 7 10 1.7e-06 0.00025 22.0 2.4 1 23 924 946 924 946 0.98 8 10 0.007 1 10.6 3.0 1 23 952 974 952 974 0.99 9 10 0.00021 0.03 15.4 0.2 1 23 980 1003 980 1003 0.98 10 10 0.016 2.3 9.5 0.3 1 23 1012 1034 1012 1034 0.97
Sequence Information
- Coding Sequence
- atgaatgaaaacaacaacagcttCTCCAGCTATGATGGTTACTACACGAACAACAATTTTCAGTTTACAGATTTAACAACCCCCTTGGATGTGAATTCTTCAAACCACTACTTCAGTTCAATAACAGATGACTTTGCGTGCTCTCAAGCCCTGACTTCAGCATCGACGGTAGCTGCAACTACGTCCCCATCCAGCATTCATGCAAACAACATCAACCTCTTGCCATTTGTACAAATTCACACAACCAATGCCCAGCCGACGAGCAACAACTTTGGCAACATCTTTCGTCGCCAGCAGAACCAGGAGGAAATCAAATCCGAAGAACCCATCAAATCAGAACAAAATGATGCCGCAGGGAATATCACTCAACAACAGAATCCCACCAATTCGACGCCGGACTGCCGAAGTCAAACTGGACACGTGACACCGACCGCGGTTGGACCTTCTCAAGCGCCAAGGGATCCGGCACTACAGACATCCAAGCCGACTGTGCACAAGTGCACTCAGTGTCCTTTTCTGACCATTCACTTGGAATCTCTGCAAAAGCATGTATCAACATCGCACGCTGCACCGTCAAACGTACAAAGGGCTAAAATCTCATGTCCCGGCTGTGAGAATGTATTCTATGCACGGGAGTCCCTGGAAGTACATCTCCTTAGCGACCACATAATGTGCAAGGAAGAGGTGAAGCACTTGTTGACAAGTGTGTTGGACCAACAGCCGAGAAAAAGTCGGATATACTTGAAGAATGTCGAGTGTCTTCGCGAACCACCGCGGCAAGAGCAAATGTTGGGCGTGGAGCAACAGGCCTACTGCAGCACATATCAGAACGCAGACGGAAATAACTTGATAGACTTGATATGTGAAAATAATGACGCTGTACGCGAGGACCATCCGACTGCCTCAGTGGCGGCGCCAGTCAAGCagaaaatttcaatcaaaagtgTCGATGTGCTCAGAGAACCAGCTCTCATGCGACGCGAAGAGCAGAGCAACTTCGATTTCATTCCAACACAAAATGAGCAAAACGATATCCTCTGCTTGGACGATGGTGGCATAACGAGGTATCCAACGTTCCTGCCTCAACCAGATCTTCCGGATATCTGCCCACAGCAGCCACAGGTTAACCAGACGTTCGATAAGCCACGACGCCCCAAGATTTATATAAAGAATGTGGACATCTTAAAGGAACCGATATTTTTGCCCCCAGACAACCTGACCAACGTCTTGAATGTGAACGACGACATCCACTTCAATCTCTTTCCCACCGAAGAGGAATTCGCCGGAGTACAGGGGAAGTTCGGTGAAGATGTGAACAACGAGTACAACTTCGATTGTGGAAATAACTTTGTAGACTGCGCAAACTTCCTGCTTCCGGATGACCCTGGATTTATGCACCCCGAACCGGAGCCACCTCGAAGCAAAATCTACATAAAGAATGTCGACATCCTCAAACAACCTCAATTCCAGGAGCACCCACGGAAATCTAACAACTTCCTTCACCTTCGGACCGTggatgaattgaatttgatgaaCAAAAATGAGGTTGAGAACTTGATCGCTCCCAACCTCGAACAGAACAGTGGAACACCCAACTTAGTGTCCAATTCGTCggagaattcgaaaaattcagaAGAGGTCTGTTCGTTTGGGATGATTAATCAGGACTCCGGGGGATTCGTCAACAAGCCTGTGCATTTCCAGACGCCACCGACAATTAGTTGGACGAATGAATATGTCCTTGACGGCTTGGATACTATCATCGATTCAAATTCAGGAAGTGAGCAAAAGAACCGCCACTACGAATTGAACACACCGCAAATTTCCATGATGGAGGATCACGTCAATCAGACAGAGGATAATCACGACCCGGAAATTCTTTTCGTGTGCGCGGAAGAGCTAATCAACGCCAATCGAGAGCATGCGGAAACCAGCGGCGAAATGACGGGCATCGACCAGAACTCACTGGAAATTGTCGAAATTCTCGATGACTTGGAACGAGATCAGCCAAGTCGAGAATCAGAGCTGGATCCAGTGTGCTTCACACCGCCCGAAAATGGATTGAATGACTTGGCAGCAGAGACACCAGCCGAAGATGCAGAGCAAGCTGCTGTGGCTCCCGAAAAGGGACGAATTTATGTGGCTGATAATTTGATGGATACAGAACGAAGCAGCTGCGGTCAAGAGGTGAATGATATGGAGGAGTCGAGCAAAACGAAGTCCAAGCCAAGAGGCCGCCCATACGGATCCAATCGAACGGGAATTACGAAGCTTCGTAAGATCTACGGCAACAACATTCTCGTAGAAACTGGGACCAAGTGCGACGCCAATGGATGTGCGTTTCGTTTTAAGAAACCTGACACCTTGGCATACCACAAACGATGTCACAATTCCGATAGCGCGTGCCCGATGATTTGTCCCGAGTGCGAGTCGACAAATTTCTCAAACTGGAACACATTGCACACGCATCTCTGGCGGAGCCACAAGATCGATATGGAACTGCACAGCTGCGAACTGTGTAATTTCAAAACACCCATCTACTCTCGACTGGTGAACACCCACAGCAAAATACATTCCGAAGAACGCAACTACAAGTGCGACCAATGCGAAAAAGCATTCAAGAACAGCAAGCAGCTAAAAAATCACCGTCGATGGCACCGGACGATAGCAACAGCCCCGCCGCCAGATGTCCATCGTTGTGAGGAGTGCGGCTCGGCGTTCTCTCATTTAAAATCACTGCGAGAGCACTTCTGCAAGGGCAGCGACCTCTTCTGCTGCGAGGTCTGTGGCAAAACATTGTCTTCCAAGTCATCCCTGAAGCTGCACATGTTGACGCACGAGGCGGTGAAGAAATTCAAGTGCAGTTCGTGCGGCTACATGGCCAACGATCACAATGCCTTCCGACGGCACCGCATGACGCACGACAAGAGCAAAATGTATGTGTGCCCGCTGTGCGACTACAAGTCTATTCAGAGCGTCGCCTATCAAaAACACATCCGAATCAAACATCCAGAGTCAGCGGATACGATTGTGCACAAGTGTAAATTCTGTCCCTTTGCCACCATCAATGAGGGCCTGCTGATTGTACACTTGGCCAAGCACAAGCTAAGAGAAGAACATGTCCGTGCCGAAGTGCAAAAGGAGAAGACACGAGGTCACACTGGCACGGAAGCGACCAATGTGGCGACGCCACCAACTGATGAGGCCTTCAGTTCCAATAACAACACCATAAGTGCGTCACCCACGACCGTTCCCAGTGCGTCCACAGTGAACTCAAGCACACAAGCGTGGACCAGTGACCTAGATAATAAGACCCCTGAAAGTTCAACTGCCGAGACTGATAATCAGCAACAACCTAGgaataaaattaaagttaagAGTGATTTAGTTTTAACGGATCCTGCGAAATTCTCCTCAAACGCTGTTAGCCCTCTATTGTTGCATTGTTTTGATAACGCCATTagatga
- Protein Sequence
- MNENNNSFSSYDGYYTNNNFQFTDLTTPLDVNSSNHYFSSITDDFACSQALTSASTVAATTSPSSIHANNINLLPFVQIHTTNAQPTSNNFGNIFRRQQNQEEIKSEEPIKSEQNDAAGNITQQQNPTNSTPDCRSQTGHVTPTAVGPSQAPRDPALQTSKPTVHKCTQCPFLTIHLESLQKHVSTSHAAPSNVQRAKISCPGCENVFYARESLEVHLLSDHIMCKEEVKHLLTSVLDQQPRKSRIYLKNVECLREPPRQEQMLGVEQQAYCSTYQNADGNNLIDLICENNDAVREDHPTASVAAPVKQKISIKSVDVLREPALMRREEQSNFDFIPTQNEQNDILCLDDGGITRYPTFLPQPDLPDICPQQPQVNQTFDKPRRPKIYIKNVDILKEPIFLPPDNLTNVLNVNDDIHFNLFPTEEEFAGVQGKFGEDVNNEYNFDCGNNFVDCANFLLPDDPGFMHPEPEPPRSKIYIKNVDILKQPQFQEHPRKSNNFLHLRTVDELNLMNKNEVENLIAPNLEQNSGTPNLVSNSSENSKNSEEVCSFGMINQDSGGFVNKPVHFQTPPTISWTNEYVLDGLDTIIDSNSGSEQKNRHYELNTPQISMMEDHVNQTEDNHDPEILFVCAEELINANREHAETSGEMTGIDQNSLEIVEILDDLERDQPSRESELDPVCFTPPENGLNDLAAETPAEDAEQAAVAPEKGRIYVADNLMDTERSSCGQEVNDMEESSKTKSKPRGRPYGSNRTGITKLRKIYGNNILVETGTKCDANGCAFRFKKPDTLAYHKRCHNSDSACPMICPECESTNFSNWNTLHTHLWRSHKIDMELHSCELCNFKTPIYSRLVNTHSKIHSEERNYKCDQCEKAFKNSKQLKNHRRWHRTIATAPPPDVHRCEECGSAFSHLKSLREHFCKGSDLFCCEVCGKTLSSKSSLKLHMLTHEAVKKFKCSSCGYMANDHNAFRRHRMTHDKSKMYVCPLCDYKSIQSVAYQKHIRIKHPESADTIVHKCKFCPFATINEGLLIVHLAKHKLREEHVRAEVQKEKTRGHTGTEATNVATPPTDEAFSSNNNTISASPTTVPSASTVNSSTQAWTSDLDNKTPESSTAETDNQQQPRNKIKVKSDLVLTDPAKFSSNAVSPLLLHCFDNAIR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00671789;
- 90% Identity
- iTF_00671789;
- 80% Identity
- -